Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374 7773512 +2274176 +3384 -60862 +41.3536% +0.0436% -0.7769%
KEAP1KO_Eclipse 1096494 1311411 1311411 1307005 +210511 -4406 -4406 +19.1986% -0.3360% -0.3360%
MTAC_3P_Alternating 586322 616475 616475 615762 +29440 -713 -713 +5.0211% -0.1157% -0.1157%
MTAC_3P_Standard 596590 623500 623500 623022 +26432 -478 -478 +4.4305% -0.0767% -0.0767%
MTAC_Yeast_Alternating_3min 137143 137143 137548 +405 +405 +0.2953% +0.2953%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156526 +885 -207 -36 +0.5686% -0.1321% -0.0230%
MTAC_Yeast_Standard_3min 138509 139777 139662 139385 +876 -392 -277 +0.6324% -0.2804% -0.1983%
MTAC_Yeast_Standard_5min 158962 158983 158983 158732 -230 -251 -251 -0.1447% -0.1579% -0.1579%
Olsen_Astral_3P 3282083 3760070 3760070 3760832 +478749 +762 +762 +14.5867% +0.0203% +0.0203%
Olsen_Exploris_3P 1022736 1155533 1155533 1154669 +131933 -864 -864 +12.9000% -0.0748% -0.0748%
SCIEX_3P 672242 749418 749418 749525 +77283 +107 +107 +11.4963% +0.0143% +0.0143%
SCP_Astral_1000pg_12ms 40882 41855 41855 41700 +818 -155 -155 +2.0009% -0.3703% -0.3703%
SCP_Astral_1000pg_24ms 41069 42339 42344 42402 +1333 +63 +58 +3.2458% +0.1488% +0.1370%
SCP_Astral_1000pg_3ms 8740 23115 23115 23115 +14375 +0 +0 +164.4737% +0% +0%
SCP_Astral_1000pg_6ms 16935 17553 17553 17553 +618 +0 +0 +3.6492% +0% +0%
SCP_Astral_10ng_12ms 99908 102934 102934 102891 +2983 -43 -43 +2.9857% -0.0418% -0.0418%
SCP_Astral_10ng_24ms 71098 72525 72805 72728 +1630 +203 -77 +2.2926% +0.2799% -0.1058%
SCP_Astral_10ng_6ms 115157 117282 117413 117430 +2273 +148 +17 +1.9738% +0.1262% +0.0145%
SCP_Astral_10ng_ms 105704 106497 106497 106497 +793 +0 +0 +0.7502% +0% +0%
SCP_Astral_250pg_12ms 10194 10806 10806 10806 +612 +0 +0 +6.0035% +0% +0%
SCP_Astral_250pg_24ms 14807 15433 15433 15433 +626 +0 +0 +4.2277% +0% +0%
SCP_Astral_250pg_3ms 1261 2032 2032 2032 +771 +0 +0 +61.1420% +0% +0%
SCP_Astral_250pg_6ms 1436 4783 4783 4783 +3347 +0 +0 +233.0780% +0% +0%
SCP_Astral_500pg_12ms 21710 21895 21895 21895 +185 +0 +0 +0.8521% +0% +0%
SCP_Astral_500pg_24ms 25860 26143 26143 26143 +283 +0 +0 +1.0944% +0% +0%
SCP_Astral_500pg_3ms 3484
SCP_Astral_500pg_6ms 10699 11474 11474 11474 +775 +0 +0 +7.2437% +0% +0%
SCP_Astral_MBR 92167 93648 93648 93585 +1418 -63 -63 +1.5385% -0.0673% -0.0673%
Seer_Astral_45 2512737 3122633 3122633 3124187 +611450 +1554 +1554 +24.3340% +0.0498% +0.0498%
Seer_Astral_single 56522 56522 56699 +177 +177 +0.3132% +0.3132%
YEAST_KO_Astral 16088274 20363242 20387044 20412655 +4324381 +49413 +25611 +26.8791% +0.2427% +0.1256%
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1805470 +142476 +222 +222 +8.5674% +0.0123% +0.0123%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1770319 +161413 -440 -440 +10.0325% -0.0248% -0.0248%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564 430774 +184606 +153 -790 +74.9919% +0.0355% -0.1831%
KEAP1KO_Eclipse 111504 133648 133648 133619 +22115 -29 -29 +19.8334% -0.0217% -0.0217%
MTAC_3P_Alternating 108267 117420 117420 117352 +9085 -68 -68 +8.3913% -0.0579% -0.0579%
MTAC_3P_Standard 110265 118733 118733 118693 +8428 -40 -40 +7.6434% -0.0337% -0.0337%
MTAC_Yeast_Alternating_3min 48709 48709 48858 +149 +149 +0.3059% +0.3059%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55023 +1054 -347 -174 +1.9530% -0.6267% -0.3152%
MTAC_Yeast_Standard_3min 48621 50039 49836 49665 +1044 -374 -171 +2.1472% -0.7474% -0.3431%
MTAC_Yeast_Standard_5min 55060 56122 56122 55919 +859 -203 -203 +1.5601% -0.3617% -0.3617%
Olsen_Astral_3P 198770 231187 231187 231103 +32333 -84 -84 +16.2665% -0.0363% -0.0363%
Olsen_Exploris_3P 51272 58902 58902 58784 +7512 -118 -118 +14.6513% -0.2003% -0.2003%
SCIEX_3P 82206 93832 93832 93920 +11714 +88 +88 +14.2496% +0.0938% +0.0938%
SCP_Astral_1000pg_12ms 14440 15016 15016 14958 +518 -58 -58 +3.5873% -0.3863% -0.3863%
SCP_Astral_1000pg_24ms 14483 15025 15026 15065 +582 +40 +39 +4.0185% +0.2662% +0.2596%
SCP_Astral_1000pg_3ms 8740 9376 9376 9376 +636 +0 +0 +7.2769% +0% +0%
SCP_Astral_1000pg_6ms 8898 9259 9259 9259 +361 +0 +0 +4.0571% +0% +0%
SCP_Astral_10ng_12ms 34865 36293 36293 36297 +1432 +4 +4 +4.1073% +0.0110% +0.0110%
SCP_Astral_10ng_24ms 24649 25391 25531 25466 +817 +75 -65 +3.3145% +0.2954% -0.2546%
SCP_Astral_10ng_6ms 40156 41556 41511 41607 +1451 +51 +96 +3.6134% +0.1227% +0.2313%
SCP_Astral_10ng_ms 36688 37676 37676 37676 +988 +0 +0 +2.6930% +0% +0%
SCP_Astral_250pg_12ms 3666 3949 3949 3949 +283 +0 +0 +7.7196% +0% +0%
SCP_Astral_250pg_24ms 5299 5611 5611 5611 +312 +0 +0 +5.8879% +0% +0%
SCP_Astral_250pg_3ms 675 721 721 721 +46 +0 +0 +6.8148% +0% +0%
SCP_Astral_250pg_6ms 1436 1738 1738 1738 +302 +0 +0 +21.0306% +0% +0%
SCP_Astral_500pg_12ms 7794 7972 7972 7972 +178 +0 +0 +2.2838% +0% +0%
SCP_Astral_500pg_24ms 9158 9342 9342 9342 +184 +0 +0 +2.0092% +0% +0%
SCP_Astral_500pg_3ms 1846
SCP_Astral_500pg_6ms 3874 4155 4155 4155 +281 +0 +0 +7.2535% +0% +0%
SCP_Astral_MBR 24110 25035 25035 24991 +881 -44 -44 +3.6541% -0.1758% -0.1758%
Seer_Astral_45 69584 89971 89971 89970 +20386 -1 -1 +29.2970% -0.0011% -0.0011%
Seer_Astral_single 56522 56522 56699 +177 +177 +0.3132% +0.3132%
YEAST_KO_Astral 66823 87992 87947 87855 +21032 -137 -92 +31.4742% -0.1557% -0.1046%
EWZ_2P_MBR_Exploris 50700 56121 56121 56145 +5445 +24 +24 +10.7396% +0.0428% +0.0428%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56328 +5737 +7 +7 +11.3400% +0.0124% +0.0124%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455 724941 +121663 +1750 -1514 +20.1670% +0.2420% -0.2084%
KEAP1KO_Eclipse 87920 92814 92814 92888 +4968 +74 +74 +5.6506% +0.0797% +0.0797%
MTAC_3P_Alternating 63773 64043 64043 63974 +201 -69 -69 +0.3152% -0.1077% -0.1077%
MTAC_3P_Standard 64317 64591 64591 64464 +147 -127 -127 +0.2286% -0.1966% -0.1966%
MTAC_Yeast_Alternating_3min 12100 12100 12067 -33 -33 -0.2727% -0.2727%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12474 +42 +63 +61 +0.3378% +0.5076% +0.4914%
MTAC_Yeast_Standard_3min 12008 12020 12034 12047 +39 +27 +13 +0.3248% +0.2246% +0.1080%
MTAC_Yeast_Standard_5min 12561 12508 12508 12465 -96 -43 -43 -0.7643% -0.3438% -0.3438%
Olsen_Astral_3P 236395 245754 245754 245756 +9361 +2 +2 +3.9599% +0.0008% +0.0008%
Olsen_Exploris_3P 146224 153802 153802 153534 +7310 -268 -268 +4.9992% -0.1743% -0.1743%
SCIEX_3P 70810 74209 74209 74366 +3556 +157 +157 +5.0219% +0.2116% +0.2116%
SCP_Astral_1000pg_12ms 9163 9538 9538 9528 +365 -10 -10 +3.9834% -0.1048% -0.1048%
SCP_Astral_1000pg_24ms 9298 9857 9852 9761 +463 -96 -91 +4.9796% -0.9739% -0.9237%
SCP_Astral_1000pg_3ms 2450 6084 6084 6084 +3634 +0 +0 +148.3265% +0% +0%
SCP_Astral_1000pg_6ms 4703 4588 4588 4588 -115 +0 +0 -2.4452% +0% +0%
SCP_Astral_10ng_12ms 16190 16202 16202 16280 +90 +78 +78 +0.5559% +0.4814% +0.4814%
SCP_Astral_10ng_24ms 13599 13792 13697 13841 +242 +49 +144 +1.7795% +0.3553% +1.0513%
SCP_Astral_10ng_6ms 17017 17179 17127 17130 +113 -49 +3 +0.6640% -0.2852% +0.0175%
SCP_Astral_10ng_ms 16252 16276 16276 16276 +24 +0 +0 +0.1477% +0% +0%
SCP_Astral_250pg_12ms 3647 3913 3913 3913 +266 +0 +0 +7.2937% +0% +0%
SCP_Astral_250pg_24ms 4300 4603 4603 4603 +303 +0 +0 +7.0465% +0% +0%
SCP_Astral_250pg_3ms 576 22 22 22 -554 +0 +0 -96.1806% +0% +0%
SCP_Astral_250pg_6ms 637 2080 2080 2080 +1443 +0 +0 +226.5306% +0% +0%
SCP_Astral_500pg_12ms 6245 6346 6346 6346 +101 +0 +0 +1.6173% +0% +0%
SCP_Astral_500pg_24ms 6722 6729 6729 6729 +7 +0 +0 +0.1041% +0% +0%
SCP_Astral_500pg_3ms 982
SCP_Astral_500pg_6ms 3708 4007 4007 4007 +299 +0 +0 +8.0636% +0% +0%
SCP_Astral_MBR 20165 20214 20214 20129 -36 -85 -85 -0.1785% -0.4205% -0.4205%
Seer_Astral_45 225377 241502 241502 241397 +16020 -105 -105 +7.1081% -0.0435% -0.0435%
Seer_Astral_single 4662 4662 4685 +23 +23 +0.4934% +0.4934%
YEAST_KO_Astral 1300836 1388950 1386974 1387877 +87041 -1073 +903 +6.6912% -0.0773% +0.0651%
EWZ_2P_MBR_Exploris 239484 245804 245804 246184 +6700 +380 +380 +2.7977% +0.1546% +0.1546%
EWZ_2P_noMBR_Exploris 235990 245406 245406 244737 +8747 -669 -669 +3.7065% -0.2726% -0.2726%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358 28540 +6800 -20 +182 +31.2787% -0.0700% +0.6418%
KEAP1KO_Eclipse 7845 8174 8174 8175 +330 +1 +1 +4.2065% +0.0122% +0.0122%
MTAC_3P_Alternating 11361 11494 11494 11494 +133 +0 +0 +1.1707% +0% +0%
MTAC_3P_Standard 11473 11609 11609 11560 +87 -49 -49 +0.7583% -0.4221% -0.4221%
MTAC_Yeast_Alternating_3min 4135 4135 4128 -7 -7 -0.1693% -0.1693%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4252 +37 +23 +20 +0.8778% +0.5439% +0.4726%
MTAC_Yeast_Standard_3min 4075 4100 4113 4134 +59 +34 +21 +1.4479% +0.8293% +0.5106%
MTAC_Yeast_Standard_5min 4249 4249 4249 4237 -12 -12 -12 -0.2824% -0.2824% -0.2824%
Olsen_Astral_3P 13820 14399 14399 14378 +558 -21 -21 +4.0376% -0.1458% -0.1458%
Olsen_Exploris_3P 7255 7623 7623 7582 +327 -41 -41 +4.5072% -0.5378% -0.5378%
SCIEX_3P 8652 9081 9081 9109 +457 +28 +28 +5.2820% +0.3083% +0.3083%
SCP_Astral_1000pg_12ms 3245 3397 3397 3389 +144 -8 -8 +4.4376% -0.2355% -0.2355%
SCP_Astral_1000pg_24ms 3254 3466 3469 3433 +179 -33 -36 +5.5009% -0.9521% -1.0378%
SCP_Astral_1000pg_3ms 2450 2396 2396 2396 -54 +0 +0 -2.2041% +0% +0%
SCP_Astral_1000pg_6ms 2508 2436 2436 2436 -72 +0 +0 -2.8708% +0% +0%
SCP_Astral_10ng_12ms 5579 5627 5627 5656 +77 +29 +29 +1.3802% +0.5154% +0.5154%
SCP_Astral_10ng_24ms 4721 4803 4754 4838 +117 +35 +84 +2.4783% +0.7287% +1.7669%
SCP_Astral_10ng_6ms 5846 5950 5930 5921 +75 -29 -9 +1.2829% -0.4874% -0.1518%
SCP_Astral_10ng_ms 5611 5655 5655 5655 +44 +0 +0 +0.7842% +0% +0%
SCP_Astral_250pg_12ms 1292 1424 1424 1424 +132 +0 +0 +10.2167% +0% +0%
SCP_Astral_250pg_24ms 1568 1660 1660 1660 +92 +0 +0 +5.8673% +0% +0%
SCP_Astral_250pg_3ms 307 8 8 8 -299 +0 +0 -97.3941% +0% +0%
SCP_Astral_250pg_6ms 637 756 756 756 +119 +0 +0 +18.6813% +0% +0%
SCP_Astral_500pg_12ms 2207 2275 2275 2275 +68 +0 +0 +3.0811% +0% +0%
SCP_Astral_500pg_24ms 2403 2388 2388 2388 -15 +0 +0 -0.6242% +0% +0%
SCP_Astral_500pg_3ms 525
SCP_Astral_500pg_6ms 1318 1447 1447 1447 +129 +0 +0 +9.7876% +0% +0%
SCP_Astral_MBR 4708 4754 4754 4720 +12 -34 -34 +0.2549% -0.7152% -0.7152%
Seer_Astral_45 5802 6299 6299 6313 +511 +14 +14 +8.8073% +0.2223% +0.2223%
Seer_Astral_single 4662 4662 4685 +23 +23 +0.4934% +0.4934%
YEAST_KO_Astral 4565 4793 4786 4797 +232 +4 +11 +5.0821% +0.0835% +0.2298%
EWZ_2P_MBR_Exploris 6831 7038 7038 7059 +228 +21 +21 +3.3377% +0.2984% +0.2984%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7077 +219 -38 -38 +3.1934% -0.5341% -0.5341%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0004 +0.0001 -0.0002 -0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0004 +0.0018 +0.0003 +0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0015 +0.0004 +0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0013 -0.0009 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0014 +0.0005 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0020 -0.0009 +0
Olsen_Astral_3P_Entrapment -0.0015 -0.0011 -0.0008 +0.0007 +0.0002
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 0.0003 +0.0004 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0001 +0.0004 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0033 +0.0021 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0037 -0.0007 +0 +0
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0011 -0.0009 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0017 +0.0005 +0.0006 +0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 0.0009 +0.0029 +0
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0027 -0.0002 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 0.0001 +0.0009 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0040 -0.0002 +0
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0012 -0.0010 +0
SCP_Astral_250pg_6ms_Entrapment -0.0051
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0010 +0.0012 +0.0010 +0.0010
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0024 -0.0011 +0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0013 +0
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0031 +0 +0
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0020 +0.0007 -0.0002
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025 -0.0019 +0.0005 +0.0006 +0.0006

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0011 -0.0001 +0.0020 +0.0020
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0025 -0.0012 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0066 -0.0016 -0.0016
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0038 +0.0003 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0047 +0.0011 +0.0002 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0045 -0.0009 +0
Olsen_Astral_3P_Entrapment -0.0041 -0.0034 -0.0035 +0.0006 -0.0001
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0002 +0.0028 -0.0004
SCIEX_3P_Entrapment -0.0031 -0.0032 -0.0038 -0.0007 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0042 +0.0007 +0.0004
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0058 +0.0012 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0036 +0.0023 +0 +0
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0049 -0.0032 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0040 +0.0015 +0.0010 +0.0010
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0023 +0.0009 +0
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0073 -0.0037 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0020 +0.0035 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0076 -0.0023 +0
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0042 -0.0000 +0
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0067 +0.0032 +0 +0
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0040 -0.0004 +0.0015 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0001 +0.0019 +0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0071 +0.0112 +0
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0045 -0.0000 +0 +0
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0030 +0.0030 -0.0011
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049 -0.0055 +0.0010 -0.0006 -0.0006

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0004 +0.0001 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 0.0002 +0.0011 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0010 +0.0003 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0008 -0.0004 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0007 +0.0001 -0.0000 -0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0010 -0.0002 +0
Olsen_Astral_3P_Entrapment -0.0008 -0.0004 -0.0003 +0.0005 +0.0001
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0005 +0.0009 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0002 +0.0003 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0028 +0.0018 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0022 -0.0002 +0 +0
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0006 -0.0008 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0010 +0.0007 +0.0002 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 0.0004 +0.0017 +0
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0020 -0.0001 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 0.0002 +0.0007 +0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0027 +0.0003 +0
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0008 -0.0001 +0
SCP_Astral_250pg_6ms_Entrapment -0.0037
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0004 +0.0015 +0.0008 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0017 -0.0002 +0.0003
SCP_Astral_500pg_3ms_Entrapment 0.0019 0.0019 +0
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0025 +0 +0
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0015 +0.0002 -0.0000
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006 -0.0006 +0.0007 +0.0000 +0.0000

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0007 -0.0005 +0.0012 +0.0012
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0014 -0.0005 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0036 -0.0006 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0021 +0.0016 +0 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0035 +0.0003 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0027 -0.0004 +0
Olsen_Astral_3P_Entrapment -0.0024 -0.0024 -0.0021 +0.0003 +0.0002
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 0.0006 +0.0033 +0.0001
SCIEX_3P_Entrapment -0.0036 -0.0031 -0.0032 +0.0003 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0023 +0.0014 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0056 -0.0007 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0016 +0.0028 +0 +0
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0035 -0.0010 +0 +0
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0031 +0.0017 +0.0001 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 +0.0018 +0
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0046 -0.0025 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0019 +0.0020 +0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0041 -0.0002 +0
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0032 -0.0018 +0
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0082 -0.0021 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0068 +0.0032 +0 +0
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0035 +0.0004 +0.0005 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 0.0001 +0.0020 +0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0066 +0.0099 +0
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0022 -0.0002 +0 +0
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0017 +0.0006 -0.0002
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029 -0.0030 +0.0012 -0.0001 -0.0001

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0047 -0.0084 -0.0019 -0.0019

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.1485 +0.1009 -0.2602 -0.2602

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 13 +4 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 13 +4 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 13 +3 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1421 -0.0038 -0.0002 -0.0002
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1362 -0.0031 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1456 -0.0000 -0.0000
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1410 -0.0120 +0.0008 +0.0006
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1639 -0.0059 -0.0004 -0.0002
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1366 -0.0137 -0.0003 -0.0003
Olsen_Astral_3P 0.0823 0.0884 0.0884 0.0884 +0.0062 +0.0000 +0.0000
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1499 +0.0019 -0.0000 -0.0000
SCIEX_3P 0.1284 0.1281 0.1281 0.1282 -0.0002 +0.0001 +0.0001

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0739 -0.0024 +0.0001 +0.0001
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0703 -0.0021 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0673 +0.0003 +0.0003
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0598 -0.0180 +0.0002 +0.0000
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0756 -0.0036 -0.0016 -0.0015
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0567 -0.0203 +0.0001 +0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0373 0.0373 -0.0001 +0.0000 +0.0000
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1019 -0.0009 -0.0001 -0.0001
SCIEX_3P 0.0864 0.0834 0.0834 0.0832 -0.0032 -0.0002 -0.0002

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0694 -0.0024 +0 +0.0005
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0356 -0.0079 +0 +0.0003
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0033 +0.0017 +0 -0.0010
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1257 +0.0015 +0 -0.0003
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0731 -0.0055 +0 +0.0001
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0257 -0.0083 +0 +0.0003
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 -0.0684 +0.0114 +0 -0.0000
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 -0.2128 +0.0117 +0 -0.0002
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0111 -0.0069 +0 -0.0014
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 -0.0103 +0.0067 +0 -0.0001
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 -0.3338 +0.0083 +0 -0.0002
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 0.0753 -0.0025 +0 +0.0002
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 0.0864 +0.0108 +0 +0.0001
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 -0.2278 +0.0011 +0 +0.0004
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 0.2203 +0.0262 +0 +0.0001
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2213 -0.0038 +0 -0.0021
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0749 +0.0068 +0 -0.0006
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2739 +0.0186 +0 -0.0003
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1003 +0.0049 +0 -0.0001
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0544 +0.0004 +0 +0.0005
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2049 +0.0054 +0 -0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0446 -0.0014 +0 -0.0018
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1118 +0.0042 +0 +0.0001
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0848 +0.0227 +0 -0.0058
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 -0.0727 +0.0187 +0 +0.0009
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0550 -0.0042 +0 +0.0011
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 0.0095 -0.0050 +0 -0.0000
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 -0.0453 +0.0117 +0 +0.0002
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0567 -0.0241 +0 +0.0003
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0153 -0.0332 +0 +0.0001
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 -0.0194 +0.0110 +0 -0.0000
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0708 -0.0352 +0 -0.0004
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0443 -0.0479 +0 +0.0010

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0663 +0.0011 +0 -0.0002
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0362 -0.0083 +0 -0.0006
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0070 +0.0048 +0 +0.0006
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1257 +0.0000 +0 +0.0012
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0711 -0.0064 +0 +0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0239 -0.0075 +0 -0.0009
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 -0.0595 +0.0198 +0 -0.0056
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 -0.1664 +0.0046 +0 +0.0004
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 0.0263 -0.0344 +0 +0.0006
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 -0.0213 +0.0070 +0 -0.0006
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 -0.3000 +0.0075 +0 -0.0003
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 0.0702 -0.0001 +0 +0.0002
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 0.0667 +0.0118 +0 +0.0006
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 -0.1991 +0.0003 +0 -0.0006
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 0.1979 +0.0273 +0 +0.0016
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2094 -0.0039 +0 -0.0038
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0711 +0.0080 +0 -0.0032
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.3062 +0.0484 +0 +0.0020
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0872 +0.0037 +0 -0.0006
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0513 +0.0006 +0 +0.0005
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2024 +0.0038 +0 -0.0002
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0439 -0.0047 +0 +0.0053
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1151 +0.0068 +0 -0.0012
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0939 +0.0509 +0 -0.0104
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 -0.0673 +0.0198 +0 +0.0060
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0481 -0.0072 +0 +0.0023
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 0.0149 +0.0003 +0 -0.0004
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 -0.0455 +0.0132 +0 +0.0005
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0587 -0.0239 +0 +0.0007
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0139 -0.0349 +0 -0.0001
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 -0.0222 +0.0141 +0 -0.0011
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0716 -0.0420 +0 -0.0015
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0512 -0.0520 +0 +0.0012

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2962 +0.0367 +0 -0.0024
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2153 +0.0142 +0 +0.0027
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2675 +0.0148 +0 -0.0031
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.3123 +0.0404 +0 +0.0037
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2226 +0.0168 +0 -0.0004
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2725 +0.0186 +0 -0.0015
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 0.5792 +0.0550 +0 -0.0196
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 0.3988 +0.0384 +0 +0.0037
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 1.3857 +0.1923 +0 +0.0252
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 0.2526 +0.0439 +0 -0.0013
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 0.3403 +0.0486 +0 -0.0013
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 0.3595 +0.0538 +0 +0.0011
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 0.3296 +0.0371 +0 -0.0012
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 0.2827 +0.0296 +0 -0.0022
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 0.5552 +0.0788 +0 -0.0011
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.6229 +0.0339 +0 +0.0106
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1526 -0.0061 +0 -0.0042
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.8013 +0.0041 +0 -0.0071
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3409 +0.0015 +0 +0.0021
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1772 +0.0655 +0 +0.0022
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3340 +0.0280 +0 +0.0035
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.6096 -0.0228 +0 +0.0135
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2475 +0.0964 +0 +0.0013
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.1596 +0.0666 +0 +0.0071
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 0.5328 +0.0340 +0 -0.0019
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 0.6055 +0.0136 +0 +0.0064
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 0.1534 -0.0003 +0 +0.0071
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 0.2132 +0.0190 +0 +0.0000
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 0.2452 +0.0284 +0 -0.0003
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 0.1978 +0.0280 +0 -0.0007
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 0.2472 +0.0124 +0 +0.0006
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 0.6338 +0.0431 +0 +0.0188
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 0.5568 +0.0632 +0 +0.0055

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1444 +0.0230 +0 -0.0081
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0766 +0.0026 +0 +0.0009
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1143 -0.0177 +0 +0.0020
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1278 -0.0076 +0 +0.0034
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0711 +0.0026 +0 +0.0005
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1262 +0.0033 +0 -0.0032
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 0.2326 +0.0399 +0 +0.0003
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 0.1405 +0.0252 +0 +0.0064
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 0.4711 +0.0889 +0 +0.0417
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 0.0451 +0.0025 +0 +0.0007
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 0.0659 +0.0100 +0 +0.0010
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 0.0583 +0.0069 +0 -0.0014
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 0.0589 -0.0030 +0 +0.0056
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 0.0497 +0.0023 +0 -0.0008
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 0.1255 +0.0328 +0 -0.0032
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2180 +0.0457 +0 -0.0310
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0579 -0.0061 +0 +0.0003
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.3290 -0.0364 +0 -0.0930
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0600 -0.0059 +0 +0.0013
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0410 +0.0045 +0 +0.0064
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0706 -0.0018 +0 -0.0035
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.2170 -0.0276 +0 +0.0110
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0783 +0.0043 +0 +0.0025
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.4419 -0.1098 +0 +0.0207
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 0.2872 +0.1039 +0 -0.0357
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 0.3315 +0.0434 +0 +0.0233
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 0.0687 +0.0076 +0 +0.0037
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 0.0603 -0.0052 +0 -0.0002
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 0.0720 -0.0076 +0 +0.0066
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 0.0651 +0.0059 +0 +0.0035
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 0.0964 -0.0129 +0 -0.0005
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 0.3209 +0.0229 +0 +0.0042
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 0.3033 +0.0416 +0 +0.0085

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600 266.9700 +19.7400 +22.7000 +19.8100 +7.9845% +9.2930% +8.0151%
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 18.5900 -5.4800 -4.2100 -1.0600 -22.7669% -18.4649% -5.3944%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 8.4800 -4.2700 -5.2000 -0.0900 -33.4902% -38.0117% -1.0502%
MTAC_3P_Standard 12.3100 13.0600 10.2700 8.6700 -3.6400 -4.3900 -1.6000 -29.5695% -33.6141% -15.5794%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 3.9500 -1.5400 -0.1100 -28.0510% -2.7094%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.0600 -1.3200 -0.6600 -0.0900 -24.5353% -13.9831% -2.1687%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 3.9800 -1.4500 -1.6700 -0.0400 -26.7035% -29.5575% -0.9950%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.9200 -0.6300 +0.6200 +0.6300 -11.3514% +14.4186% +14.6853%
Olsen_Astral_3P 76.4000 66.2000 62.2200 60.9600 -15.4400 -5.2400 -1.2600 -20.2094% -7.9154% -2.0251%
Olsen_Exploris_3P 27.6600 23.7200 20.3200 19.4300 -8.2300 -4.2900 -0.8900 -29.7542% -18.0860% -4.3799%
SCIEX_3P 30.2900 33.2900 28.0700 27.1500 -3.1400 -6.1400 -0.9200 -10.3665% -18.4440% -3.2775%
SCP_Astral_1000pg_12ms 5.7900 5.9000 4.1000 -1.6900 -1.8000 -29.1883% -30.5085%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7300 -0.7900 -2.3800 -0.0300 -17.4779% -38.9525% -0.7979%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.4800 -2.2600 -0.0500 -0.0500 -39.3728% -1.4164% -1.4164%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.4700 -1.6000 -0.1600 +0.0300 -22.6308% -2.8419% +0.5515%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 5.0500 -2.3300 +0.1600 +0.2600 -31.5718% +3.2720% +5.4280%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.5900 -1.8600 -0.6000 -0.0700 -28.8372% -11.5607% -1.5021%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.5900 -1.1500 +0.0800 +0.1200 -24.2616% +2.2792% +3.4582%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100 3.5800 -1.6800 -0.6100 -0.0300 -31.9392% -14.5585% -0.8310%
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4200 -1.2300 -0.4100 -0.0400 -26.4516% -10.7050% -1.1561%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.2200 -0.9500 -0.1700 -0.0500 -22.7818% -5.0147% -1.5291%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.6900 -1.5900 +0.2000 +0.1500 -30.1136% +5.7307% +4.2373%
SCP_Astral_500pg_24ms 5.5100 3.8200 3.7600 -1.7500 -0.0600 -31.7604% -1.5707%
SCP_Astral_500pg_3ms 4.7300
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.4000 -1.2500 -0.0300 -0.1100 -26.8817% -0.8746% -3.1339%
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700 62.0600 -38.2900 -5.7500 -4.2100 -38.1565% -8.4796% -6.3528%
Seer_Astral_single 4.3100 5.7400 4.9500 +0.6400 -0.7900 +14.8492% -13.7631%
YEAST_KO_Astral 235.6300 216.9300 213.3300 237.4500 +1.8200 +20.5200 +24.1200 +0.7724% +9.4593% +11.3064%
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 23.8400 -5.1600 -5.3500 -0.9100 -17.7931% -18.3282% -3.6768%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 21.6600 -5.4500 -6.6500 -0.4100 -20.1033% -23.4899% -1.8577%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Astral_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCIEX_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

YEAST_KO_Astral_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png