Regression Metrics Report

Versions: v0.6.4, v0.6.6, v0.6.7, v0.7.0, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs v0.6.7 % current vs v0.7.0 % current vs develop
APMS_Astral 5499336 7770128 7773512 7737757 6253241
KEAP1KO_Eclipse 1096494 1311411 1307005 1311955 1293541 1293541 +197047 -17870 -13464 -18414 +0 +17.9706% -1.3627% -1.0301% -1.4036% +0%
MTAC_3P_Alternating 586322 616475 615762 610710 599881 599881 +13559 -16594 -15881 -10829 +0 +2.3126% -2.6918% -2.5791% -1.7732% +0%
MTAC_3P_Standard 596590 623500 623022 617574 607435 607435 +10845 -16065 -15587 -10139 +0 +1.8178% -2.5766% -2.5018% -1.6417% +0%
MTAC_Yeast_Alternating_3min 137143 137548 136839 135560 135560 -1583 -1988 -1279 +0 -1.1543% -1.4453% -0.9347% +0%
MTAC_Yeast_Alternating_5min 155641 156733 156551 156509 155401 154844 -797 -1889 -1707 -1665 -557 -0.5121% -1.2052% -1.0904% -1.0638% -0.3584%
MTAC_Yeast_Standard_3min 138509 139777 139385 139292 137787 137787 -722 -1990 -1598 -1505 +0 -0.5213% -1.4237% -1.1465% -1.0805% +0%
MTAC_Yeast_Standard_5min 158962 158983 158732 159160 157922 157922 -1040 -1061 -810 -1238 +0 -0.6542% -0.6674% -0.5103% -0.7778% +0%
Olsen_Astral_3P 3282083 3760070 3760832 3714135 3638372
Olsen_Exploris_3P 1022736 1155533 1154669 1123873 1184084 1184084 +161348 +28551 +29415 +60211 +0 +15.7761% +2.4708% +2.5475% +5.3575% +0%
SCIEX_3P 672242 749418 749525 722698 714454
SCP_Astral_1000pg_12ms 40882 41855 41700 42425 42100 42100 +1218 +245 +400 -325 +0 +2.9793% +0.5854% +0.9592% -0.7661% +0%
SCP_Astral_1000pg_24ms 41069 42339 42402 42023 41152 41152 +83 -1187 -1250 -871 +0 +0.2021% -2.8036% -2.9480% -2.0727% +0%
SCP_Astral_1000pg_3ms 8740 23115 23115 23015 22913 22913 +14173 -202 -202 -102 +0 +162.1625% -0.8739% -0.8739% -0.4432% +0%
SCP_Astral_1000pg_6ms 16935 17553 17553 18409 18348 18348 +1413 +795 +795 -61 +0 +8.3437% +4.5291% +4.5291% -0.3314% +0%
SCP_Astral_10ng_12ms 99908 102934 102891 98983 98648 98648 -1260 -4286 -4243 -335 +0 -1.2612% -4.1638% -4.1238% -0.3384% +0%
SCP_Astral_10ng_24ms 71098 72525 72728 71445 71126 71126 +28 -1399 -1602 -319 +0 +0.0394% -1.9290% -2.2027% -0.4465% +0%
SCP_Astral_10ng_6ms 115157 117282 117316 114322 113392 113250 -1907 -4032 -4066 -1072 -142 -1.6560% -3.4379% -3.4659% -0.9377% -0.1252%
SCP_Astral_10ng_ms 105704 106497 106497 105622 104512 104512 -1192 -1985 -1985 -1110 +0 -1.1277% -1.8639% -1.8639% -1.0509% +0%
SCP_Astral_250pg_12ms 10194 10806 10806 11238 11233 11233 +1039 +427 +427 -5 +0 +10.1923% +3.9515% +3.9515% -0.0445% +0%
SCP_Astral_250pg_24ms 14807 15433 15433 16041 15699 15699 +892 +266 +266 -342 +0 +6.0242% +1.7236% +1.7236% -2.1320% +0%
SCP_Astral_250pg_3ms 1261 2032 2032 2450 2386 2386 +1125 +354 +354 -64 +0 +89.2149% +17.4213% +17.4213% -2.6122% +0%
SCP_Astral_250pg_6ms 1436 4783 4783 5690 5731 5731 +4295 +948 +948 +41 +0 +299.0947% +19.8202% +19.8202% +0.7206% +0%
SCP_Astral_500pg_12ms 21710 21895 21895 22580 22463 22463 +753 +568 +568 -117 +0 +3.4684% +2.5942% +2.5942% -0.5182% +0%
SCP_Astral_500pg_24ms 25860 26143 26143 26260 25625 25625 -235 -518 -518 -635 +0 -0.9087% -1.9814% -1.9814% -2.4181% +0%
SCP_Astral_500pg_3ms 3484 6898 6834 6834 +3350 -64 +0 +96.1538% -0.9278% +0%
SCP_Astral_500pg_6ms 10699 11474 11474 12882 12889 12889 +2190 +1415 +1415 +7 +0 +20.4692% +12.3322% +12.3322% +0.0543% +0%
SCP_Astral_MBR 92167 93648 93585 91884 90838 90838 -1329 -2810 -2747 -1046 +0 -1.4419% -3.0006% -2.9353% -1.1384% +0%
Seer_Astral_45 2512737 3122633 3124006 3135497 2970421
Seer_Astral_single 56522 56699 55793 55891 55891 -631 -808 +98 +0 -1.1164% -1.4251% +0.1756% +0%
YEAST_KO_Astral 16088274 20363242 20393787 19199790 17648311
EWZ_2P_MBR_Exploris 1662994 1805248 1805470 1794012 1775346 1775346 +112352 -29902 -30124 -18666 +0 +6.7560% -1.6564% -1.6685% -1.0405% +0%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770319 1769221 1775346 1776936 +168030 +6177 +6617 +7715 +1590 +10.4437% +0.3488% +0.3738% +0.4361% +0.0896%
MacCoss_Eclipse_Normalization_noNorm 2078034
MacCoss_Eclipse_Normalization_yesNorm 2076822

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs v0.6.7 % current vs v0.7.0 % current vs develop
APMS_Astral 246168 430621 430774 397213 355853
KEAP1KO_Eclipse 111504 133648 133619 131359 132031 132031 +20527 -1617 -1588 +672 +0 +18.4092% -1.2099% -1.1885% +0.5116% +0%
MTAC_3P_Alternating 108267 117420 117352 114659 114816 114816 +6549 -2604 -2536 +157 +0 +6.0489% -2.2177% -2.1610% +0.1369% +0%
MTAC_3P_Standard 110265 118733 118693 115800 116148 116148 +5883 -2585 -2545 +348 +0 +5.3353% -2.1772% -2.1442% +0.3005% +0%
MTAC_Yeast_Alternating_3min 48709 48858 49032 48995 48995 +286 +137 -37 +0 +0.5872% +0.2804% -0.0755% +0%
MTAC_Yeast_Alternating_5min 53969 55370 55075 55840 56132 55821 +1852 +451 +746 -19 -311 +3.4316% +0.8145% +1.3545% -0.0340% -0.5541%
MTAC_Yeast_Standard_3min 48621 50039 49665 50289 50415 50415 +1794 +376 +750 +126 +0 +3.6898% +0.7514% +1.5101% +0.2506% +0%
MTAC_Yeast_Standard_5min 55060 56122 55919 56707 56827 56827 +1767 +705 +908 +120 +0 +3.2092% +1.2562% +1.6238% +0.2116% +0%
Olsen_Astral_3P 198770 231187 231103 234505 234149
Olsen_Exploris_3P 51272 58902 58784 55047 58593 58593 +7321 -309 -191 +3546 +0 +14.2787% -0.5246% -0.3249% +6.4418% +0%
SCIEX_3P 82206 93832 93920 87927 87858
SCP_Astral_1000pg_12ms 14440 15016 14958 15249 15707 15707 +1267 +691 +749 +458 +0 +8.7742% +4.6018% +5.0074% +3.0035% +0%
SCP_Astral_1000pg_24ms 14483 15025 15065 14916 15070 15070 +587 +45 +5 +154 +0 +4.0530% +0.2995% +0.0332% +1.0324% +0%
SCP_Astral_1000pg_3ms 8740 9376 9376 9389 9364 9364 +624 -12 -12 -25 +0 +7.1396% -0.1280% -0.1280% -0.2663% +0%
SCP_Astral_1000pg_6ms 8898 9259 9259 9784 9810 9810 +912 +551 +551 +26 +0 +10.2495% +5.9510% +5.9510% +0.2657% +0%
SCP_Astral_10ng_12ms 34865 36293 36297 34342 34425 34425 -440 -1868 -1872 +83 +0 -1.2620% -5.1470% -5.1575% +0.2417% +0%
SCP_Astral_10ng_24ms 24649 25391 25466 25119 25223 25223 +574 -168 -243 +104 +0 +2.3287% -0.6617% -0.9542% +0.4140% +0%
SCP_Astral_10ng_6ms 40156 41556 41545 40043 40026 39946 -210 -1610 -1599 -97 -80 -0.5230% -3.8743% -3.8488% -0.2422% -0.1999%
SCP_Astral_10ng_ms 36688 37676 37676 37649 37457 37457 +769 -219 -219 -192 +0 +2.0961% -0.5813% -0.5813% -0.5100% +0%
SCP_Astral_250pg_12ms 3666 3949 3949 4209 4246 4246 +580 +297 +297 +37 +0 +15.8211% +7.5209% +7.5209% +0.8791% +0%
SCP_Astral_250pg_24ms 5299 5611 5611 5855 6066 6066 +767 +455 +455 +211 +0 +14.4744% +8.1091% +8.1091% +3.6038% +0%
SCP_Astral_250pg_3ms 675 721 721 908 879 879 +204 +158 +158 -29 +0 +30.2222% +21.9140% +21.9140% -3.1938% +0%
SCP_Astral_250pg_6ms 1436 1738 1738 2145 2163 2163 +727 +425 +425 +18 +0 +50.6267% +24.4534% +24.4534% +0.8392% +0%
SCP_Astral_500pg_12ms 7794 7972 7972 8252 8406 8406 +612 +434 +434 +154 +0 +7.8522% +5.4441% +5.4441% +1.8662% +0%
SCP_Astral_500pg_24ms 9158 9342 9342 9371 9414 9414 +256 +72 +72 +43 +0 +2.7954% +0.7707% +0.7707% +0.4589% +0%
SCP_Astral_500pg_3ms 1846 2600 2586 2586 +740 -14 +0 +40.0867% -0.5385% +0%
SCP_Astral_500pg_6ms 3874 4155 4155 4774 4805 4805 +931 +650 +650 +31 +0 +24.0320% +15.6438% +15.6438% +0.6494% +0%
SCP_Astral_MBR 24110 25035 24991 24570 24526 24526 +416 -509 -465 -44 +0 +1.7254% -2.0332% -1.8607% -0.1791% +0%
Seer_Astral_45 69584 89971 90103 87204 87511
Seer_Astral_single 56522 56699 55793 55891 55891 -631 -808 +98 +0 -1.1164% -1.4251% +0.1756% +0%
YEAST_KO_Astral 66823 87992 87888 87428 86437
EWZ_2P_MBR_Exploris 50700 56121 56145 54665 55147 55147 +4447 -974 -998 +482 +0 +8.7712% -1.7355% -1.7775% +0.8817% +0%
EWZ_2P_noMBR_Exploris 50591 56321 56328 55060 55147 55299 +4708 -1022 -1029 +239 +152 +9.3060% -1.8146% -1.8268% +0.4341% +0.2756%
MacCoss_Eclipse_Normalization_noNorm 73278
MacCoss_Eclipse_Normalization_yesNorm 73341

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs v0.6.7 % current vs v0.7.0 % current vs develop
APMS_Astral 603278 723191 724941 730564 648553
KEAP1KO_Eclipse 87920 92814 92888 93982 93441 91924 +4004 -890 -964 -2058 -1517 +4.5541% -0.9589% -1.0378% -2.1898% -1.6235%
MTAC_3P_Alternating 63773 64043 63974 63611 63015 64853 +1080 +810 +879 +1242 +1838 +1.6935% +1.2648% +1.3740% +1.9525% +2.9168%
MTAC_3P_Standard 64317 64591 64464 64219 63385 65061 +744 +470 +597 +842 +1676 +1.1568% +0.7277% +0.9261% +1.3111% +2.6442%
MTAC_Yeast_Alternating_3min 12100 12067 11970 11940 12165 +65 +98 +195 +225 +0.5372% +0.8121% +1.6291% +1.8844%
MTAC_Yeast_Alternating_5min 12432 12411 12471 12362 12335 12583 +151 +172 +112 +221 +248 +1.2146% +1.3859% +0.8981% +1.7877% +2.0105%
MTAC_Yeast_Standard_3min 12008 12020 12047 11960 11933 12049 +41 +29 +2 +89 +116 +0.3414% +0.2413% +0.0166% +0.7441% +0.9721%
MTAC_Yeast_Standard_5min 12561 12508 12465 12477 12410 12681 +120 +173 +216 +204 +271 +0.9553% +1.3831% +1.7329% +1.6350% +2.1837%
Olsen_Astral_3P 236395 245754 245756 242430 240719
Olsen_Exploris_3P 146224 153802 153534 153990 155827 154684 +8460 +882 +1150 +694 -1143 +5.7856% +0.5735% +0.7490% +0.4507% -0.7335%
SCIEX_3P 70810 74209 74366 72157 71550
SCP_Astral_1000pg_12ms 9163 9538 9528 9585 9334 9724 +561 +186 +196 +139 +390 +6.1224% +1.9501% +2.0571% +1.4502% +4.1783%
SCP_Astral_1000pg_24ms 9298 9857 9761 9412 9553 9636 +338 -221 -125 +224 +83 +3.6352% -2.2421% -1.2806% +2.3799% +0.8688%
SCP_Astral_1000pg_3ms 2450 6084 6084 6247 6116 6051 +3601 -33 -33 -196 -65 +146.9796% -0.5424% -0.5424% -3.1375% -1.0628%
SCP_Astral_1000pg_6ms 4703 4588 4588 4958 4923 4924 +221 +336 +336 -34 +1 +4.6991% +7.3235% +7.3235% -0.6858% +0.0203%
SCP_Astral_10ng_12ms 16190 16202 16280 16025 16055 16117 -73 -85 -163 +92 +62 -0.4509% -0.5246% -1.0012% +0.5741% +0.3862%
SCP_Astral_10ng_24ms 13599 13792 13841 13688 13671 13740 +141 -52 -101 +52 +69 +1.0368% -0.3770% -0.7297% +0.3799% +0.5047%
SCP_Astral_10ng_6ms 17017 17179 17178 16913 16777 16932 -85 -247 -246 +19 +155 -0.4995% -1.4378% -1.4321% +0.1123% +0.9239%
SCP_Astral_10ng_ms 16252 16276 16276 16117 15961 16287 +35 +11 +11 +170 +326 +0.2154% +0.0676% +0.0676% +1.0548% +2.0425%
SCP_Astral_250pg_12ms 3647 3913 3913 3864 3539 3645 -2 -268 -268 -219 +106 -0.0548% -6.8490% -6.8490% -5.6677% +2.9952%
SCP_Astral_250pg_24ms 4300 4603 4603 4797 4977 5012 +712 +409 +409 +215 +35 +16.5581% +8.8855% +8.8855% +4.4820% +0.7032%
SCP_Astral_250pg_3ms 576 22 22 936 741 741 +165 +719 +719 -195 +0 +28.6458% +3268.1818% +3268.1818% -20.8333% +0%
SCP_Astral_250pg_6ms 637 2080 2080 2029 2046 2046 +1409 -34 -34 +17 +0 +221.1931% -1.6346% -1.6346% +0.8379% +0%
SCP_Astral_500pg_12ms 6245 6346 6346 6016 6127 6170 -75 -176 -176 +154 +43 -1.2010% -2.7734% -2.7734% +2.5598% +0.7018%
SCP_Astral_500pg_24ms 6722 6729 6729 7012 7023 7067 +345 +338 +338 +55 +44 +5.1324% +5.0230% +5.0230% +0.7844% +0.6265%
SCP_Astral_500pg_3ms 982 2365 2177 2210 +1228 -155 +33 +125.0509% -6.5539% +1.5158%
SCP_Astral_500pg_6ms 3708 4007 4007 4045 3918 3811 +103 -196 -196 -234 -107 +2.7778% -4.8914% -4.8914% -5.7849% -2.7310%
SCP_Astral_MBR 20165 20214 20129 20074 19851 19983 -182 -231 -146 -91 +132 -0.9026% -1.1428% -0.7253% -0.4533% +0.6650%
Seer_Astral_45 225377 241502 241455 241952 237529
Seer_Astral_single 4662 4685 4700 4632 4699 +37 +14 -1 +67 +0.7937% +0.2988% -0.0213% +1.4465%
YEAST_KO_Astral 1300836 1388950 1388263 1327464 1306693
EWZ_2P_MBR_Exploris 239484 245804 246184 245112 244993 245335 +5851 -469 -849 +223 +342 +2.4432% -0.1908% -0.3449% +0.0910% +0.1396%
EWZ_2P_noMBR_Exploris 235990 245406 244737 245013 244993 245090 +9100 -316 +353 +77 +97 +3.8561% -0.1288% +0.1442% +0.0314% +0.0396%
MacCoss_Eclipse_Normalization_noNorm 179243
MacCoss_Eclipse_Normalization_yesNorm 179528

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs v0.6.7 % current vs v0.7.0 % current vs develop
APMS_Astral 21740 28560 28540 27527 26807
KEAP1KO_Eclipse 7845 8174 8175 8155 8203 7906 +61 -268 -269 -249 -297 +0.7776% -3.2787% -3.2905% -3.0533% -3.6206%
MTAC_3P_Alternating 11361 11494 11494 11351 11338 11689 +328 +195 +195 +338 +351 +2.8871% +1.6965% +1.6965% +2.9777% +3.0958%
MTAC_3P_Standard 11473 11609 11560 11477 11396 11753 +280 +144 +193 +276 +357 +2.4405% +1.2404% +1.6696% +2.4048% +3.1327%
MTAC_Yeast_Alternating_3min 4135 4128 4092 4100 4201 +66 +73 +109 +101 +1.5961% +1.7684% +2.6637% +2.4634%
MTAC_Yeast_Alternating_5min 4215 4229 4248 4218 4218 4322 +107 +93 +74 +104 +104 +2.5386% +2.1991% +1.7420% +2.4656% +2.4656%
MTAC_Yeast_Standard_3min 4075 4100 4134 4090 4083 4149 +74 +49 +15 +59 +66 +1.8160% +1.1951% +0.3628% +1.4425% +1.6165%
MTAC_Yeast_Standard_5min 4249 4249 4237 4244 4231 4354 +105 +105 +117 +110 +123 +2.4712% +2.4712% +2.7614% +2.5919% +2.9071%
Olsen_Astral_3P 13820 14399 14378 14293 14296
Olsen_Exploris_3P 7255 7623 7582 7340 7479 7378 +123 -245 -204 +38 -101 +1.6954% -3.2140% -2.6906% +0.5177% -1.3504%
SCIEX_3P 8652 9081 9109 8679 8618
SCP_Astral_1000pg_12ms 3245 3397 3389 3411 3318 3468 +223 +71 +79 +57 +150 +6.8721% +2.0901% +2.3311% +1.6711% +4.5208%
SCP_Astral_1000pg_24ms 3254 3466 3433 3291 3434 3429 +175 -37 -4 +138 -5 +5.3780% -1.0675% -0.1165% +4.1933% -0.1456%
SCP_Astral_1000pg_3ms 2450 2396 2396 2450 2397 2391 -59 -5 -5 -59 -6 -2.4082% -0.2087% -0.2087% -2.4082% -0.2503%
SCP_Astral_1000pg_6ms 2508 2436 2436 2634 2642 2641 +133 +205 +205 +7 -1 +5.3030% +8.4154% +8.4154% +0.2658% -0.0379%
SCP_Astral_10ng_12ms 5579 5627 5656 5504 5546 5570 -9 -57 -86 +66 +24 -0.1613% -1.0130% -1.5205% +1.1991% +0.4327%
SCP_Astral_10ng_24ms 4721 4803 4838 4783 4811 4795 +74 -8 -43 +12 -16 +1.5675% -0.1666% -0.8888% +0.2509% -0.3326%
SCP_Astral_10ng_6ms 5846 5950 5949 5843 5802 5822 -24 -128 -127 -21 +20 -0.4105% -2.1513% -2.1348% -0.3594% +0.3447%
SCP_Astral_10ng_ms 5611 5655 5655 5596 5572 5698 +87 +43 +43 +102 +126 +1.5505% +0.7604% +0.7604% +1.8227% +2.2613%
SCP_Astral_250pg_12ms 1292 1424 1424 1406 1288 1347 +55 -77 -77 -59 +59 +4.2570% -5.4073% -5.4073% -4.1963% +4.5807%
SCP_Astral_250pg_24ms 1568 1660 1660 1758 1873 1865 +297 +205 +205 +107 -8 +18.9413% +12.3494% +12.3494% +6.0865% -0.4271%
SCP_Astral_250pg_3ms 307 8 8 350 283 283 -24 +275 +275 -67 +0 -7.8176% +3437.5000% +3437.5000% -19.1429% +0%
SCP_Astral_250pg_6ms 637 756 756 751 766 766 +129 +10 +10 +15 +0 +20.2512% +1.3228% +1.3228% +1.9973% +0%
SCP_Astral_500pg_12ms 2207 2275 2275 2169 2230 2240 +33 -35 -35 +71 +10 +1.4952% -1.5385% -1.5385% +3.2734% +0.4484%
SCP_Astral_500pg_24ms 2403 2388 2388 2477 2539 2527 +124 +139 +139 +50 -12 +5.1602% +5.8208% +5.8208% +2.0186% -0.4726%
SCP_Astral_500pg_3ms 525 902 828 824 +299 -78 -4 +56.9524% -8.6475% -0.4831%
SCP_Astral_500pg_6ms 1318 1447 1447 1486 1435 1377 +59 -70 -70 -109 -58 +4.4765% -4.8376% -4.8376% -7.3351% -4.0418%
SCP_Astral_MBR 4708 4754 4720 4712 4719 4763 +55 +9 +43 +51 +44 +1.1682% +0.1893% +0.9110% +1.0823% +0.9324%
Seer_Astral_45 5802 6299 6297 6122 6137
Seer_Astral_single 4662 4685 4700 4632 4699 +37 +14 -1 +67 +0.7937% +0.2988% -0.0213% +1.4465%
YEAST_KO_Astral 4565 4793 4795 4676 4691
EWZ_2P_MBR_Exploris 6831 7038 7059 6953 7009 7072 +241 +34 +13 +119 +63 +3.5280% +0.4831% +0.1842% +1.7115% +0.8988%
EWZ_2P_noMBR_Exploris 6858 7115 7077 7019 7009 7060 +202 -55 -17 +41 +51 +2.9455% -0.7730% -0.2402% +0.5841% +0.7276%
MacCoss_Eclipse_Normalization_noNorm 5804
MacCoss_Eclipse_Normalization_yesNorm 5827

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
APMS_Astral_Entrapment -0.0009
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0004 -0.0002 -0.0011 -0.0011 -0.0006 -0.0009 -0.0007 -0.0009 +0
KEAP1KO_Eclipse_Entrapment -0.0007 -0.0007 +0
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0010 -0.0008 -0.0008 -0.0003 -0.0007 -0.0007 +0.0002 +0
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0004 -0.0006 -0.0007 -0.0007 +0.0006 -0.0009 -0.0012 -0.0002 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0015 -0.0019 -0.0026 -0.0026 -0.0006 -0.0011 -0.0007 +0
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0014 -0.0015 -0.0015 -0.0011 -0.0002 -0.0002 -0.0001 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0014 -0.0012 -0.0020 -0.0020 -0.0001 -0.0007 -0.0007 -0.0008 +0
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0024 -0.0025 -0.0025 -0.0015 -0.0006 -0.0001 +0
MacCoss_Eclipse_Normalization_Entrapment 0.0006
Olsen_Astral_3P_Entrapment -0.0015 -0.0008 -0.0013 -0.0015
Olsen_Exploris_3P_Entrapment -0.0002 0.0003 -0.0011 0.0005 0.0005 +0.0006 +0.0002 +0.0016 +0
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0004 -0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0030 -0.0020 -0.0020 +0.0003 +0.0010 +0
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0032 -0.0046 -0.0046 +0.0008 -0.0013 -0.0015 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0048 -0.0030 -0.0046 -0.0038 -0.0008 -0.0001 +0.0009 -0.0009 +0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0036 -0.0026 -0.0026 -0.0024 -0.0015 -0.0015 +0.0010 +0
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0017 -0.0024 -0.0024 -0.0002 -0.0001 -0.0007 +0
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0015 -0.0013 -0.0013 +0.0007 -0.0022 +0.0002 +0
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0018 -0.0018 -0.0018 +0.0007 +0.0009 +0.0001 +0
SCP_Astral_10ng_6ms_Entrapment -0.0008 0.0001 -0.0021 -0.0012 -0.0012 -0.0004 -0.0013 +0.0010 +0
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0003 -0.0052 -0.0052 -0.0013 -0.0012 -0.0055 +0
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0024 -0.0031 -0.0031 -0.0029 -0.0019 -0.0007 +0
SCP_Astral_250pg_3ms_Entrapment -0.0069 0 0 +0.0069 +0
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0026 -0.0050 -0.0050 +0.0001 -0.0023 +0
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0010 -0.0027 -0.0026 -0.0026 -0.0004 -0.0006 -0.0016 +0.0002 +0
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0024 -0.0012 -0.0011 -0.0011 +0.0002 +0.0013 +0.0001 +0
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0023 -0.0035 -0.0035 -0.0022 -0.0012 +0
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0033 -0.0015 -0.0015 +0.0016 +0.0016 +0.0018 +0
SCP_Astral_MBR_Entrapment -0.0026 -0.0020 -0.0014 -0.0022 -0.0022 +0.0004 -0.0003 -0.0008 +0
Seer_Astral_45_Entrapment -0.0023
Seer_Astral_single_Entrapment -0.0022 -0.0022 +0
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0019 -0.0026 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
APMS_Astral_Entrapment -0.0021
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0011 -0.0008 -0.0026 -0.0014 -0.0004 +0.0017 -0.0003 -0.0006 +0.0012
KEAP1KO_Eclipse_Entrapment -0.0029 -0.0029 +0.0000
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0011 0.0005 0.0007 -0.0013 -0.0003 -0.0006 -0.0002 -0.0018 -0.0020
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0025 -0.0029 -0.0035 -0.0049 -0.0037 -0.0027 -0.0024 -0.0020 -0.0014
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0066 -0.0053 -0.0048 -0.0032 +0.0018 +0.0034 +0.0021 +0.0016
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0048 -0.0034 -0.0063 -0.0021 -0.0024 -0.0024 -0.0014 -0.0029
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0047 -0.0020 -0.0028 -0.0032 +0.0026 +0.0018 +0.0015 -0.0012 -0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0056 -0.0041 -0.0047 -0.0011 -0.0002 +0.0009 -0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0017
Olsen_Astral_3P_Entrapment -0.0041 -0.0035 -0.0023 -0.0038
Olsen_Exploris_3P_Entrapment -0.0029 -0.0002 -0.0028 -0.0009 0.0007 +0.0036 +0.0008 +0.0035 +0.0015
SCIEX_3P_Entrapment -0.0031 -0.0038 -0.0025 -0.0034
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0042 -0.0042 -0.0051 -0.0022 +0.0027 +0.0019 +0.0020 +0.0029
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0070 -0.0090 -0.0020 -0.0031 -0.0019 -0.0019
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0059 -0.0072 -0.0084 -0.0034 +0.0025 +0.0002 +0.0025 +0.0038 +0.0050
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0043 -0.0045 -0.0018 -0.0001 +0.0031 +0.0031 +0.0025 +0.0027
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0040 -0.0054 -0.0027 +0.0028 +0.0023 +0.0013 +0.0027
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0016 -0.0045 -0.0034 -0.0001 -0.0011 -0.0017 +0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0066 -0.0061 -0.0049 -0.0013 +0.0024 +0.0017 +0.0011
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0020 -0.0054 -0.0046 -0.0045 +0.0009 -0.0025 +0.0009 +0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0034 -0.0064 -0.0079 -0.0026 -0.0003 -0.0045 -0.0016
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0026 -0.0013 -0.0031 +0.0011 +0.0011 -0.0005 -0.0018
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 -0.0085 0 0 +0.0028 +0 +0 +0.0085 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0084 -0.0088 -0.0088 +0.0011 -0.0021 -0.0021 -0.0004 +0
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0040 0.0014 -0.0020 -0.0020 +0.0016 +0.0034 +0.0020 -0.0034 +0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0001 -0.0051 -0.0062 -0.0048 -0.0028 -0.0047 +0.0004 +0.0014
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0020 -0.0001 -0.0001 +0.0041 -0.0072 -0.0021 +0
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0008 -0.0056 -0.0036 +0.0009 +0.0009 +0.0009 -0.0028 +0.0020
SCP_Astral_MBR_Entrapment -0.0059 -0.0030 -0.0025 -0.0050 -0.0027 +0.0032 +0.0003 -0.0002 +0.0023
Seer_Astral_45_Entrapment -0.0049
Seer_Astral_single_Entrapment -0.0074 -0.0072 +0.0002
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0055 -0.0034 -0.0047

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
APMS_Astral_Entrapment -0.0002
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0005 -0.0013 -0.0013 -0.0007 -0.0008 -0.0008 -0.0008 +0
KEAP1KO_Eclipse_Entrapment -0.0003 -0.0003 +0
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 -0.0002 -0.0001 -0.0001 +0.0000 -0.0004 -0.0004 +0.0001 +0
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0002 -0.0004 -0.0003 -0.0003 +0.0006 -0.0004 -0.0005 +0.0001 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0010 -0.0013 -0.0014 -0.0014 -0.0001 -0.0004 -0.0001 +0
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0010 -0.0008 -0.0008 -0.0004 -0.0001 -0.0001 +0.0001 +0
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0008 -0.0011 -0.0011 -0.0002 -0.0004 -0.0003 -0.0003 +0
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0015 -0.0015 -0.0015 -0.0007 -0.0005 -0.0000 +0
MacCoss_Eclipse_Normalization_Entrapment 0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0003 -0.0008 -0.0008
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0006 -0.0000 -0.0000 +0.0004 -0.0005 +0.0006 +0
SCIEX_3P_Entrapment -0.0005 -0.0002 -0.0002 -0.0004
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0030 -0.0019 -0.0019 -0.0004 +0.0011 +0
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 -0.0037 -0.0037 +0.0009 -0.0009 -0.0006 +0
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0029 -0.0026 -0.0034 -0.0026 -0.0006 -0.0004 +0.0003 -0.0000 +0.0008
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0028 -0.0024 -0.0024 -0.0026 -0.0018 -0.0018 +0.0004 +0
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0010 -0.0016 -0.0016 +0.0001 -0.0004 -0.0006 +0
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0012 -0.0008 -0.0008 +0.0006 -0.0012 +0.0004 +0
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0016 -0.0015 -0.0015 +0.0005 +0.0006 +0.0001 +0
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0012 -0.0008 -0.0008 -0.0003 -0.0011 +0.0004 +0
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0003 -0.0031 -0.0031 -0.0001 -0.0005 -0.0029 +0
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0013 -0.0014 -0.0014 -0.0007 -0.0006 -0.0001 +0
SCP_Astral_250pg_3ms_Entrapment -0.0060 0 0 +0.0060 +0
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0021 -0.0030 -0.0030 +0.0007 -0.0009 +0
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0004 -0.0020 -0.0013 -0.0013 +0.0005 -0.0001 -0.0010 +0.0007 +0
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0017 -0.0018 -0.0017 -0.0017 -0.0001 +0.0001 +0.0001 +0
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0004 -0.0016 -0.0016 -0.0034 -0.0012 +0
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0019 -0.0010 -0.0010 +0.0015 +0.0015 +0.0009 +0
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0008 -0.0013 -0.0013 +0.0005 +0.0002 -0.0005 +0
Seer_Astral_45_Entrapment -0.0011
Seer_Astral_single_Entrapment -0.0022 -0.0022 +0
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006 -0.0007 -0.0007

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
APMS_Astral_Entrapment -0.0012
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0007 -0.0001 -0.0012 -0.0008 -0.0006 +0.0011 -0.0001 -0.0007 +0.0004
KEAP1KO_Eclipse_Entrapment -0.0016 -0.0011 +0.0005
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 -0.0002 0.0003 0.0002 -0.0003 -0.0001 -0.0004 -0.0000 -0.0006 -0.0005
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0014 -0.0021 -0.0021 -0.0016 -0.0008 -0.0004 -0.0003 +0.0004 +0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0036 -0.0034 -0.0030 -0.0013 +0.0017 +0.0023 +0.0021 +0.0017
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0025 -0.0013 -0.0029 +0.0008 -0.0008 -0.0008 -0.0004 -0.0016
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0035 -0.0014 -0.0016 -0.0010 +0.0028 +0.0021 +0.0025 +0.0003 +0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0037 -0.0021 -0.0028 -0.0005 -0.0001 +0.0010 -0.0007
MacCoss_Eclipse_Normalization_Entrapment -0.0009
Olsen_Astral_3P_Entrapment -0.0024 -0.0021 -0.0019 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0006 -0.0017 -0.0016 -0.0005 +0.0021 -0.0012 +0.0012 +0.0011
SCIEX_3P_Entrapment -0.0036 -0.0032 -0.0021 -0.0028
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0023 -0.0032 -0.0032 -0.0018 +0.0019 +0.0005 +0.0014 +0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0058 -0.0043 -0.0053 -0.0004 +0.0003 +0.0005 -0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0033 -0.0041 -0.0039 -0.0012 +0.0032 +0.0004 +0.0021 +0.0029 +0.0027
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0040 -0.0040 -0.0019 +0.0006 +0.0016 +0.0016 +0.0021 +0.0021
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0031 -0.0042 -0.0027 +0.0020 +0.0005 +0.0004 +0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0014 -0.0025 -0.0025 +0.0007 -0.0012 -0.0011 +0.0000
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0038 -0.0033 -0.0036 -0.0014 +0.0010 +0.0002 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0019 -0.0038 -0.0029 -0.0031 +0.0008 -0.0012 +0.0007 -0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0019 -0.0030 -0.0036 +0.0003 +0.0006 -0.0016 -0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0003 -0.0001 -0.0018 -0.0005 +0.0014 -0.0015 -0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0047 0 0 +0.0060 +0.0082 +0.0082 +0.0047 +0
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0055 -0.0047 -0.0047 +0.0052 +0.0021 +0.0021 +0.0008 +0
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0035 -0.0007 -0.0028 -0.0011 +0.0028 +0.0029 +0.0024 -0.0004 +0.0016
SCP_Astral_500pg_24ms_Entrapment -0.0019 0.0001 -0.0043 -0.0045 -0.0041 -0.0022 -0.0042 +0.0002 +0.0003
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0028 0.0003 0.0003 +0.0035 -0.0063 -0.0025 +0
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 0.0009 -0.0028 -0.0024 -0.0004 -0.0002 -0.0002 -0.0033 +0.0004
SCP_Astral_MBR_Entrapment -0.0024 -0.0017 -0.0022 -0.0028 -0.0023 +0.0001 -0.0005 -0.0000 +0.0006
Seer_Astral_45_Entrapment -0.0029
Seer_Astral_single_Entrapment -0.0074 -0.0072 +0.0002
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0030 -0.0016 -0.0021

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0047 0.0115 0 0.0346 +0.0215 +0.0279 +0.0298 +0.0230 +0.0346

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.1485 0 0 0.0219 -0.0256 -0.3867 -0.1265 +0.0219 +0.0219

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 1 1 +1 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 1 3 3 3 +0 +1 +2 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 14 15 15 +4 +0 +1 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 13 14 14 +4 +0 +0 +1 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 13 14 14 +3 +0 +0 +1 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 2 2 2 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 2 2 2 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 2 2 2 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 1 1 1 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 1 1 1 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 1 1 1 +0 +0 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 1 1 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 1 0 1 +0 +0 +1 -1 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 1 1 1 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 1 1 1 +0 +0 +1 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 0 0 +0 +0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 0 0 +0 +0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1421 0.1400 0.1374 0.1374 -0.0085 -0.0049 -0.0047 -0.0027 +0
MTAC_3P_Standard 0.1393 0.1363 0.1362 0.1351 0.1324 0.1324 -0.0069 -0.0039 -0.0039 -0.0028 +0
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1424 0.1408 0.1408 -0.0048 -0.0048 -0.0017 +0
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1409 0.1376 0.1355 0.1352 -0.0179 -0.0051 -0.0058 -0.0024 -0.0004
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1639 0.1616 0.1597 0.1597 -0.0101 -0.0047 -0.0043 -0.0019 +0
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1366 0.1337 0.1323 0.1323 -0.0180 -0.0046 -0.0043 -0.0014 +0
Olsen_Astral_3P 0.0823 0.0884 0.0884 0.0854 0.0832
Olsen_Exploris_3P 0.1480 0.1500 0.1499 0.1495 0.1505 0.1505 +0.0025 +0.0005 +0.0006 +0.0010 +0
SCIEX_3P 0.1284 0.1281 0.1282 0.1196 0.1184
MacCoss_Eclipse_Normalization_noNorm 0.5869
MacCoss_Eclipse_Normalization_yesNorm 0.1719

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0739 0.0727 0.0720 0.0740 -0.0023 +0.0002 +0.0001 +0.0013 +0.0019
MTAC_3P_Standard 0.0723 0.0704 0.0703 0.0700 0.0688 0.0701 -0.0022 -0.0003 -0.0002 +0.0002 +0.0013
MTAC_Yeast_Alternating_3min 0.0670 0.0673 0.0660 0.0658 0.0667 -0.0003 -0.0006 +0.0007 +0.0008
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0603 0.0593 0.0588 0.0597 -0.0181 +0.0001 -0.0006 +0.0004 +0.0009
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0756 0.0753 0.0762 0.0763 -0.0029 -0.0009 +0.0007 +0.0010 +0.0001
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0569 0.0568 0.0579 -0.0191 +0.0013 +0.0012 +0.0010 +0.0011
Olsen_Astral_3P 0.0374 0.0373 0.0373 0.0367 0.0363
Olsen_Exploris_3P 0.1028 0.1020 0.1019 0.1036 0.1027 0.1025 -0.0003 +0.0005 +0.0006 -0.0011 -0.0002
SCIEX_3P 0.0864 0.0834 0.0832 0.0787 0.0785
MacCoss_Eclipse_Normalization_noNorm 0.5877
MacCoss_Eclipse_Normalization_yesNorm 0.1228

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0694 -0.0765 -0.0777 -0.0777 -0.0024 +0.0005 +0.0070 +0.0012 +0
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0356 -0.0411 -0.0409 -0.0409 -0.0079 +0.0003 +0.0055 -0.0002 +0
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0033 -0.0010 0.0009 0.0009 +0.0017 -0.0010 -0.0023 -0.0001 +0
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1257 -0.1249 -0.1269 -0.1269 +0.0015 -0.0003 -0.0008 +0.0020 +0
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0731 -0.0725 -0.0722 -0.0722 -0.0055 +0.0001 -0.0006 -0.0003 +0
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0257 -0.0306 -0.0291 -0.0291 -0.0083 +0.0003 +0.0050 -0.0016 +0
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 -0.1013 -0.0961 +0.0114 -0.0000 +0.0329 -0.0052
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2128 -0.2280 -0.2291 +0.0117 -0.0002 +0.0151 +0.0011
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0111 -0.0392 -0.0197 -0.0069 -0.0014 +0.0282 -0.0195
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0103 -0.0408 -0.0422 +0.0067 -0.0001 +0.0305 +0.0014
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3338 -0.3431 -0.3429 +0.0083 -0.0002 +0.0093 -0.0002
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0753 0.0351 0.0335 -0.0025 +0.0002 -0.0402 -0.0016
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0864 0.0719 0.0731 +0.0108 +0.0001 -0.0145 +0.0012
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2278 -0.2316 -0.2278 +0.0011 +0.0004 +0.0038 -0.0038
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2203 0.2012 0.2023 +0.0262 +0.0001 -0.0191 +0.0011
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2213 0.2154 0.2365 0.2365 -0.0038 -0.0021 -0.0059 +0.0211 +0
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0749 -0.0796 -0.0605 -0.0605 +0.0068 -0.0006 +0.0047 -0.0191 +0
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2739 0.2498 0.2785 0.2785 +0.0186 -0.0003 -0.0240 +0.0287 +0
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1003 0.0949 0.0883 0.0883 +0.0049 -0.0001 -0.0054 -0.0067 +0
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0544 -0.0545 -0.0456 -0.0456 +0.0004 +0.0005 +0.0001 -0.0089 +0
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2049 0.2032 0.2036 0.2036 +0.0054 -0.0004 -0.0017 +0.0004 +0
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0446 0.0384 0.0225 0.0225 -0.0014 -0.0018 -0.0062 -0.0160 +0
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1074 -0.1020 -0.1020 +0.0042 +0.0001 -0.0045 -0.0054 +0
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0848 -0.0610 -0.0965 -0.0965 +0.0227 -0.0058 -0.0238 +0.0355 +0
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0727 -0.0768 -0.0773 +0.0187 +0.0009 +0.0041 +0.0006
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0550 -0.0675 -0.0681 -0.0042 +0.0011 +0.0125 +0.0006
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 0.0024 0.0036 -0.0050 -0.0000 -0.0071 +0.0012
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0453 -0.0427 -0.0425 +0.0117 +0.0002 -0.0026 -0.0002
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0567 -0.0616 -0.0618 -0.0241 +0.0003 +0.0049 +0.0003
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0153 -0.0226 -0.0230 -0.0332 +0.0001 +0.0073 +0.0004
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 -0.0094 -0.0084 +0.0110 -0.0000 -0.0100 -0.0011
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0708 -0.0563 -0.0587 -0.0352 -0.0004 -0.0145 +0.0024
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0443 -0.0379 -0.0368 -0.0479 +0.0010 -0.0064 -0.0010

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0663 -0.0738 -0.0733 -0.0734 +0.0011 -0.0002 +0.0076 -0.0005 +0.0001
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0362 -0.0407 -0.0411 -0.0421 -0.0083 -0.0006 +0.0045 +0.0004 +0.0010
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0070 -0.0025 -0.0036 -0.0046 +0.0048 +0.0006 -0.0044 +0.0010 +0.0010
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1257 -0.1262 -0.1206 -0.1226 +0.0000 +0.0012 +0.0005 -0.0055 +0.0020
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0711 -0.0706 -0.0701 -0.0701 -0.0064 +0.0004 -0.0005 -0.0005 -0.0000
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0239 -0.0317 -0.0310 -0.0312 -0.0075 -0.0009 +0.0078 -0.0007 +0.0002
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0595 -0.0960 -0.0903 +0.0198 -0.0056 +0.0365 -0.0057
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1664 -0.1707 -0.1634 +0.0046 +0.0004 +0.0043 -0.0072
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0263 -0.0017 0.0172 -0.0344 +0.0006 -0.0246 +0.0154
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0213 -0.0503 -0.0525 +0.0070 -0.0006 +0.0290 +0.0021
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3000 -0.3066 -0.3056 +0.0075 -0.0003 +0.0066 -0.0010
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0702 0.0300 0.0288 -0.0001 +0.0002 -0.0402 -0.0012
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0667 0.0532 0.0510 +0.0118 +0.0006 -0.0135 -0.0021
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1991 -0.2000 -0.1957 +0.0003 -0.0006 +0.0009 -0.0042
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1979 0.1791 0.1803 +0.0273 +0.0016 -0.0188 +0.0012
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2094 0.2067 0.2211 0.2176 -0.0039 -0.0038 -0.0028 +0.0144 -0.0035
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0711 -0.0727 -0.0557 -0.0526 +0.0080 -0.0032 +0.0016 -0.0170 -0.0031
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3062 0.2582 0.2654 0.2668 +0.0484 +0.0020 -0.0481 +0.0073 +0.0013
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0872 0.0840 0.0759 0.0762 +0.0037 -0.0006 -0.0032 -0.0081 +0.0003
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0513 -0.0505 -0.0421 -0.0422 +0.0006 +0.0005 -0.0008 -0.0084 +0.0001
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2024 0.2017 0.2033 0.2052 +0.0038 -0.0002 -0.0008 +0.0016 +0.0019
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0439 0.0342 0.0046 -0.0040 -0.0047 +0.0053 -0.0096 -0.0297 -0.0006
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1151 -0.1117 -0.1085 -0.1107 +0.0068 -0.0012 -0.0034 -0.0033 +0.0022
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.0939 -0.0850 -0.1172 -0.1220 +0.0509 -0.0104 -0.0089 +0.0322 +0.0047
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0673 -0.0702 -0.0700 +0.0198 +0.0060 +0.0029 -0.0003
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0481 -0.0623 -0.0677 -0.0072 +0.0023 +0.0142 +0.0054
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0149 0.0041 0.0041 +0.0003 -0.0004 -0.0108 +0.0000
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0455 -0.0407 -0.0408 +0.0132 +0.0005 -0.0048 +0.0001
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0587 -0.0614 -0.0626 -0.0239 +0.0007 +0.0027 +0.0012
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0139 -0.0215 -0.0217 -0.0349 -0.0001 +0.0076 +0.0002
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0222 -0.0113 -0.0116 +0.0141 -0.0011 -0.0109 +0.0003
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0716 -0.0556 -0.0578 -0.0420 -0.0015 -0.0160 +0.0023
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0512 -0.0434 -0.0443 -0.0520 +0.0012 -0.0078 +0.0009

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2962 0.3164 0.3078 0.3078 +0.0367 -0.0024 +0.0202 -0.0086 +0
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2153 0.2095 0.2099 0.2099 +0.0142 +0.0027 -0.0058 +0.0004 +0
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2675 0.2598 0.2608 0.2608 +0.0148 -0.0031 -0.0078 +0.0011 +0
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3123 0.3116 0.2980 0.2980 +0.0404 +0.0037 -0.0007 -0.0136 +0
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2226 0.2195 0.2193 0.2193 +0.0168 -0.0004 -0.0031 -0.0002 +0
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2725 0.2662 0.2680 0.2680 +0.0186 -0.0015 -0.0063 +0.0017 +0
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5792 0.6177 0.5756 +0.0550 -0.0196 +0.0384 -0.0420
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3988 0.3667 0.3500 +0.0384 +0.0037 -0.0321 -0.0167
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3857 1.3577 1.2411 +0.1923 +0.0252 -0.0279 -0.1166
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2526 0.2600 0.2564 +0.0439 -0.0013 +0.0074 -0.0036
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3403 0.3434 0.3356 +0.0486 -0.0013 +0.0030 -0.0078
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3595 0.3858 0.3801 +0.0538 +0.0011 +0.0262 -0.0056
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3296 0.3425 0.3315 +0.0371 -0.0012 +0.0129 -0.0110
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2827 0.2872 0.2854 +0.0296 -0.0022 +0.0045 -0.0018
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5552 0.5553 0.5384 +0.0788 -0.0011 +0.0001 -0.0169
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6229 0.6989 0.5708 0.5708 +0.0339 +0.0106 +0.0761 -0.1281 +0
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1526 0.1660 0.1512 0.1512 -0.0061 -0.0042 +0.0134 -0.0147 +0
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8013 0.9497 0.9575 0.9575 +0.0041 -0.0071 +0.1483 +0.0078 +0
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3409 0.3454 0.3505 0.3505 +0.0015 +0.0021 +0.0045 +0.0051 +0
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1772 0.1685 0.1517 0.1517 +0.0655 +0.0022 -0.0087 -0.0168 +0
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3340 0.3402 0.3353 0.3353 +0.0280 +0.0035 +0.0062 -0.0049 +0
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.6096 0.6474 0.5768 0.5768 -0.0228 +0.0135 +0.0378 -0.0706 +0
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2475 0.2320 0.2479 0.2479 +0.0964 +0.0013 -0.0155 +0.0159 +0
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1596 1.3578 1.2751 1.2751 +0.0666 +0.0071 +0.1982 -0.0827 +0
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5328 0.4878 0.4827 +0.0340 -0.0019 -0.0450 -0.0051
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.6055 0.5762 0.5418 +0.0136 +0.0064 -0.0293 -0.0344
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1534 0.1147 0.1067 -0.0003 +0.0071 -0.0387 -0.0080
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 0.1548 0.1520 +0.0190 +0.0000 -0.0584 -0.0028
SCIEX_3P human C vs A 0.2171 0.2455 0.2452 0.1974 0.1943 +0.0284 -0.0003 -0.0478 -0.0031
SCIEX_3P human C vs B 0.1705 0.1985 0.1978 0.1377 0.1340 +0.0280 -0.0007 -0.0601 -0.0037
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2472 0.1858 0.1850 +0.0124 +0.0006 -0.0614 -0.0008
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6338 0.5883 0.5740 +0.0431 +0.0188 -0.0455 -0.0143
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5568 0.5075 0.4971 +0.0632 +0.0055 -0.0494 -0.0103

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ v0.6.6 vs v0.6.4 Δ v0.6.7 vs v0.6.6 Δ v0.7.0 vs v0.6.7 Δ develop vs v0.7.0 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1444 0.1262 0.1208 0.2248 +0.0230 -0.0081 -0.0182 -0.0054 +0.1040
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0766 0.0771 0.0815 0.0917 +0.0026 +0.0009 +0.0005 +0.0043 +0.0102
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1143 0.1039 0.1122 0.1282 -0.0177 +0.0020 -0.0104 +0.0083 +0.0159
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1278 0.1280 0.1196 0.1808 -0.0076 +0.0034 +0.0002 -0.0084 +0.0612
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0711 0.0681 0.0716 0.0956 +0.0026 +0.0005 -0.0030 +0.0035 +0.0239
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1262 0.1335 0.1254 0.1597 +0.0033 -0.0032 +0.0073 -0.0081 +0.0343
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2326 0.2190 0.2657 +0.0399 +0.0003 -0.0136 +0.0467
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1405 0.1197 0.1086 +0.0252 +0.0064 -0.0208 -0.0112
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4711 0.4575 0.3928 +0.0889 +0.0417 -0.0136 -0.0647
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0451 0.0485 0.0465 +0.0025 +0.0007 +0.0034 -0.0021
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0659 0.0612 0.0625 +0.0100 +0.0010 -0.0047 +0.0013
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0583 0.0583 0.0620 +0.0069 -0.0014 -0.0000 +0.0038
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0589 0.0668 0.0632 -0.0030 +0.0056 +0.0079 -0.0036
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0497 0.0503 0.0513 +0.0023 -0.0008 +0.0006 +0.0010
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1255 0.1233 0.1208 +0.0328 -0.0032 -0.0022 -0.0025
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2180 0.2632 0.2277 0.2539 +0.0457 -0.0310 +0.0452 -0.0355 +0.0262
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0579 0.0517 0.0486 0.0631 -0.0061 +0.0003 -0.0062 -0.0031 +0.0145
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.3290 0.4916 0.5005 0.4854 -0.0364 -0.0930 +0.1626 +0.0090 -0.0152
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0600 0.0674 0.0691 0.0652 -0.0059 +0.0013 +0.0074 +0.0016 -0.0039
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0410 0.0343 0.0433 0.0314 +0.0045 +0.0064 -0.0066 +0.0090 -0.0120
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0706 0.0798 0.0824 0.0810 -0.0018 -0.0035 +0.0093 +0.0025 -0.0014
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2170 0.2340 0.2174 0.2476 -0.0276 +0.0110 +0.0170 -0.0166 +0.0302
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0783 0.0777 0.0738 0.1260 +0.0043 +0.0025 -0.0006 -0.0039 +0.0522
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4419 0.4386 0.4304 0.5465 -0.1098 +0.0207 -0.0032 -0.0082 +0.1161
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.2872 0.2279 0.2223 +0.1039 -0.0357 -0.0593 -0.0056
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3315 0.2466 0.2435 +0.0434 +0.0233 -0.0849 -0.0031
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0687 0.0330 0.0528 +0.0076 +0.0037 -0.0357 +0.0198
SCIEX_3P human B vs A 0.0657 0.0604 0.0603 0.0448 0.0488 -0.0052 -0.0002 -0.0154 +0.0040
SCIEX_3P human C vs A 0.0731 0.0655 0.0720 0.0496 0.0608 -0.0076 +0.0066 -0.0225 +0.0112
SCIEX_3P human C vs B 0.0556 0.0615 0.0651 0.0470 0.0457 +0.0059 +0.0035 -0.0181 -0.0013
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0964 0.0764 0.0675 -0.0129 -0.0005 -0.0199 -0.0090
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3209 0.2538 0.2592 +0.0229 +0.0042 -0.0671 +0.0055
SCIEX_3P yeast C vs B 0.2531 0.2947 0.3033 0.2534 0.2754 +0.0416 +0.0085 -0.0498 +0.0220

Metric: runtime

Dataset v0.6.4 v0.6.6 v0.6.7 v0.7.0 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs v0.6.7 Δ current vs v0.7.0 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs v0.6.7 % current vs v0.7.0 % current vs develop
APMS_Astral 247.2300 244.2700 331.1700 190.8900 175.4100
KEAP1KO_Eclipse 24.0700 22.8000 17.3200 19.8700 18.7000 19.8200 -4.2500 -2.9800 +2.5000 -0.0500 +1.1200 -17.6568% -13.0702% +14.4342% -0.2516% +5.9893%
MTAC_3P_Alternating 12.7500 13.6800 9.0700 8.3600 9.5800 8.3300 -4.4200 -5.3500 -0.7400 -0.0300 -1.2500 -34.6667% -39.1082% -8.1588% -0.3589% -13.0480%
MTAC_3P_Standard 12.3100 13.0600 8.9600 9.6600 9.5500 10.6900 -1.6200 -2.3700 +1.7300 +1.0300 +1.1400 -13.1600% -18.1470% +19.3080% +10.6625% +11.9372%
MTAC_Yeast_Alternating_3min 5.4900 4.2300 4.4100 4.2600 4.5700 -0.9200 +0.3400 +0.1600 +0.3100 -16.7577% +8.0378% +3.6281% +7.2770%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.3800 4.7500 4.5000 4.3400 -1.0400 -0.3800 -0.0400 -0.4100 -0.1600 -19.3309% -8.0508% -0.9132% -8.6316% -3.5556%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.1400 4.4400 4.1400 4.5100 -0.9200 -1.1400 +0.3700 +0.0700 +0.3700 -16.9429% -20.1770% +8.9372% +1.5766% +8.9372%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.4200 4.5300 4.3200 4.8500 -0.7000 +0.5500 +0.4300 +0.3200 +0.5300 -12.6126% +12.7907% +9.7285% +7.0640% +12.2685%
Olsen_Astral_3P 76.4000 66.2000 62.9200 70.0100 66.0200
Olsen_Exploris_3P 27.6600 23.7200 19.7600 18.3200 17.4100 19.0100 -8.6500 -4.7100 -0.7500 +0.6900 +1.6000 -31.2726% -19.8567% -3.7955% +3.7664% +9.1901%
SCIEX_3P 30.2900 33.2900 25.6900 26.5600 25.9700
SCP_Astral_1000pg_12ms 5.7900 5.9000 4.5900 4.6500 4.2500 5.7100 -0.0800 -0.1900 +1.1200 +1.0600 +1.4600 -1.3817% -3.2203% +24.4009% +22.7957% +34.3529%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4000 4.5300 5.2700 -0.9900 +0.0700 +0.8700 +0.7400 -15.8147% +1.3462% +19.7727% +16.3355%
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7300 4.8000 3.8500 4.2500 -0.2700 -1.8600 +0.5200 -0.5500 +0.4000 -5.9735% -30.4419% +13.9410% -11.4583% +10.3896%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5100 3.9200 3.6000 3.6800 -2.0600 +0.1500 +0.1700 -0.2400 +0.0800 -35.8885% +4.2493% +4.8433% -6.1224% +2.2222%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.5300 5.5100 6.3500 5.6700 -1.4000 +0.0400 +0.1400 +0.1600 -0.6800 -19.8020% +0.7105% +2.5316% +2.9038% -10.7087%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.7300 6.1400 6 6.0300 -1.5600 -2.3300 +0.3000 -0.1100 +0.0300 -20.5534% -27.8708% +5.2356% -1.7915% +0.5000%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.9300 4.6300 4.6500 4.9100 -2.4700 +0.0200 -0.0200 +0.2800 +0.2600 -33.4688% +0.4090% -0.4057% +6.0475% +5.5914%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6700 4.3000 4.3800 4.3900 -2.0600 -0.8000 -0.2800 +0.0900 +0.0100 -31.9380% -15.4143% -5.9957% +2.0930% +0.2283%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.6600 3.5300 3.8000 -0.9400 +0.2900 +0.1400 +0.2700 -19.8312% +8.2621% +3.8251% +7.6487%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.8400 4.1400 3.9100 -1.3500 -0.2800 +0.0700 -0.2300 -25.6654% -6.6826% +1.8229% -5.5556%
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4300 3.7100 3.6400 3.5600 -1.0900 -0.2700 +0.1300 -0.1500 -0.0800 -23.4409% -7.0496% +3.7901% -4.0431% -2.1978%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2900 3.6900 3.4500 3.3500 -0.8200 -0.0400 +0.0600 -0.3400 -0.1000 -19.6643% -1.1799% +1.8237% -9.2141% -2.8986%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5300 3.6000 3.5000 3.5600 -1.7200 +0.0700 +0.0300 -0.0400 +0.0600 -32.5758% +2.0057% +0.8499% -1.1111% +1.7143%
SCP_Astral_500pg_24ms 5.5100 3.8200 3.8200 4.1500 4.3600 4.0300 -1.4800 +0.2100 +0.2100 -0.1200 -0.3300 -26.8603% +5.4974% +5.4974% -2.8916% -7.5688%
SCP_Astral_500pg_3ms 4.7300 3.4600 3.5900 3.7600 -0.9700 +0.3000 +0.1700 -20.5074% +8.6705% +4.7354%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.6200 3.7300 3.3800 3.6500 -1.0000 +0.2200 +0.0300 -0.0800 +0.2700 -21.5054% +6.4140% +0.8287% -2.1448% +7.9882%
SCP_Astral_MBR 9.0400 6.5500 6.4000 6.1400 -2.9000 -0.4100 -0.2600 -32.0796% -6.2595% -4.0625%
Seer_Astral_45 100.3500 67.8100 65.6700 60.0400 56.2500
Seer_Astral_single 4.3100 4.4700 4.1400 4.9000 6.1400 +1.8300 +1.6700 +2 +1.2400 +42.4594% +37.3602% +48.3092% +25.3061%
YEAST_KO_Astral 235.6300 216.9300 252.0700 163.6800 136.9900
EWZ_2P_MBR_Exploris 29 29.1900 23.3100 24.4800 22.6000 23.9700 -5.0300 -5.2200 +0.6600 -0.5100 +1.3700 -17.3448% -17.8828% +2.8314% -2.0833% +6.0619%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0100 21.8700 22.5600 25 -2.1100 -3.3100 +2.9900 +3.1300 +2.4400 -7.7831% -11.6920% +13.5847% +14.3118% +10.8156%
MacCoss_Eclipse_Normalization_noNorm 27.6500
MacCoss_Eclipse_Normalization_yesNorm 27.5900

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

KEAP1KO_Eclipse_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_3P_Standard_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

MacCoss_Eclipse_Normalization_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

SCP_Astral_MBR_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png

Seer_Astral_single_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_prob.png
efdr_comparison_global_prob.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_prec_prob.png
efdr_comparison_prec_prob.png