Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374 7663805 +2164469 -106323 -170569 +39.3587% -1.3684% -2.1772%
KEAP1KO_Eclipse 1096494 1311411 1311411 1302228 +205734 -9183 -9183 +18.7629% -0.7002% -0.7002%
MTAC_3P_Alternating 586322 616475 616475 612978 +26656 -3497 -3497 +4.5463% -0.5673% -0.5673%
MTAC_3P_Standard 596590 623500 623500 620785 +24195 -2715 -2715 +4.0555% -0.4354% -0.4354%
MTAC_Yeast_Alternating_3min 137143 137143 136876 -267 -267 -0.1947% -0.1947%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156635 +994 -98 +73 +0.6386% -0.0625% +0.0466%
MTAC_Yeast_Standard_3min 138509 139777 139662 138995 +486 -782 -667 +0.3509% -0.5595% -0.4776%
MTAC_Yeast_Standard_5min 158962 158983 158983 158723 -239 -260 -260 -0.1504% -0.1635% -0.1635%
Olsen_Astral_3P 3282083 3760070 3760070 3741343 +459260 -18727 -18727 +13.9929% -0.4980% -0.4980%
Olsen_Exploris_3P 1022736 1155533 1155533 1152233 +129497 -3300 -3300 +12.6618% -0.2856% -0.2856%
SCIEX_3P 672242 749418 749418 747166 +74924 -2252 -2252 +11.1454% -0.3005% -0.3005%
SCP_Astral_1000pg_12ms 40882 41855 41855 41666 +784 -189 -189 +1.9177% -0.4516% -0.4516%
SCP_Astral_1000pg_24ms 41069 42339 42344 42389 +1320 +50 +45 +3.2141% +0.1181% +0.1063%
SCP_Astral_1000pg_3ms 8740 23115 23115 23127 +14387 +12 +12 +164.6110% +0.0519% +0.0519%
SCP_Astral_1000pg_6ms 16935 17553 17553 17657 +722 +104 +104 +4.2634% +0.5925% +0.5925%
SCP_Astral_10ng_12ms 99908 102934 102934 102825 +2917 -109 -109 +2.9197% -0.1059% -0.1059%
SCP_Astral_10ng_24ms 71098 72525 72805 72550 +1452 +25 -255 +2.0423% +0.0345% -0.3503%
SCP_Astral_10ng_6ms 115157 117282 117413 116775 +1618 -507 -638 +1.4050% -0.4323% -0.5434%
SCP_Astral_10ng_ms 105704 106497 106497 106566 +862 +69 +69 +0.8155% +0.0648% +0.0648%
SCP_Astral_250pg_12ms 10194 10806 10806 10722 +528 -84 -84 +5.1795% -0.7773% -0.7773%
SCP_Astral_250pg_24ms 14807 15433 15433 15594 +787 +161 +161 +5.3151% +1.0432% +1.0432%
SCP_Astral_250pg_3ms 1261 2032 2032 2027 +766 -5 -5 +60.7454% -0.2461% -0.2461%
SCP_Astral_250pg_6ms 1436 4783 4783 4772 +3336 -11 -11 +232.3120% -0.2300% -0.2300%
SCP_Astral_500pg_12ms 21710 21895 21895 21891 +181 -4 -4 +0.8337% -0.0183% -0.0183%
SCP_Astral_500pg_24ms 25860 26143 26143 26301 +441 +158 +158 +1.7053% +0.6044% +0.6044%
SCP_Astral_500pg_3ms 3484 5680 +2196 +63.0310%
SCP_Astral_500pg_6ms 10699 11474 11474 11394 +695 -80 -80 +6.4959% -0.6972% -0.6972%
SCP_Astral_MBR 92167 93648 93648 93245 +1078 -403 -403 +1.1696% -0.4303% -0.4303%
Seer_Astral_45 2512737 3122633 3122633 3100233 +587496 -22400 -22400 +23.3807% -0.7173% -0.7173%
Seer_Astral_single 56522 56522 56577 +55 +55 +0.0973% +0.0973%
YEAST_KO_Astral 16088274 20363242 20387044 20280804 +4192530 -82438 -106240 +26.0595% -0.4048% -0.5211%
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1798734 +135740 -6514 -6514 +8.1624% -0.3608% -0.3608%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1761866 +152960 -8893 -8893 +9.5071% -0.5022% -0.5022%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564 52753 -193415 -377868 -378811 -78.5703% -87.7496% -87.7763%
KEAP1KO_Eclipse 111504 133648 133648 133183 +21679 -465 -465 +19.4424% -0.3479% -0.3479%
MTAC_3P_Alternating 108267 117420 117420 117131 +8864 -289 -289 +8.1872% -0.2461% -0.2461%
MTAC_3P_Standard 110265 118733 118733 118717 +8452 -16 -16 +7.6652% -0.0135% -0.0135%
MTAC_Yeast_Alternating_3min 48709 48709 48701 -8 -8 -0.0164% -0.0164%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55443 +1474 +73 +246 +2.7312% +0.1318% +0.4457%
MTAC_Yeast_Standard_3min 48621 50039 49836 49840 +1219 -199 +4 +2.5071% -0.3977% +0.0080%
MTAC_Yeast_Standard_5min 55060 56122 56122 56022 +962 -100 -100 +1.7472% -0.1782% -0.1782%
Olsen_Astral_3P 198770 231187 231187 122502 -76268 -108685 -108685 -38.3700% -47.0117% -47.0117%
Olsen_Exploris_3P 51272 58902 58902 58815 +7543 -87 -87 +14.7117% -0.1477% -0.1477%
SCIEX_3P 82206 93832 93832 93792 +11586 -40 -40 +14.0939% -0.0426% -0.0426%
SCP_Astral_1000pg_12ms 14440 15016 15016 14970 +530 -46 -46 +3.6704% -0.3063% -0.3063%
SCP_Astral_1000pg_24ms 14483 15025 15026 14990 +507 -35 -36 +3.5007% -0.2329% -0.2396%
SCP_Astral_1000pg_3ms 8740 9376 9376 9379 +639 +3 +3 +7.3112% +0.0320% +0.0320%
SCP_Astral_1000pg_6ms 8898 9259 9259 9282 +384 +23 +23 +4.3156% +0.2484% +0.2484%
SCP_Astral_10ng_12ms 34865 36293 36293 36240 +1375 -53 -53 +3.9438% -0.1460% -0.1460%
SCP_Astral_10ng_24ms 24649 25391 25531 25411 +762 +20 -120 +3.0914% +0.0788% -0.4700%
SCP_Astral_10ng_6ms 40156 41556 41511 41435 +1279 -121 -76 +3.1851% -0.2912% -0.1831%
SCP_Astral_10ng_ms 36688 37676 37676 37696 +1008 +20 +20 +2.7475% +0.0531% +0.0531%
SCP_Astral_250pg_12ms 3666 3949 3949 3898 +232 -51 -51 +6.3284% -1.2915% -1.2915%
SCP_Astral_250pg_24ms 5299 5611 5611 5679 +380 +68 +68 +7.1712% +1.2119% +1.2119%
SCP_Astral_250pg_3ms 675 721 721 719 +44 -2 -2 +6.5185% -0.2774% -0.2774%
SCP_Astral_250pg_6ms 1436 1738 1738 1742 +306 +4 +4 +21.3092% +0.2301% +0.2301%
SCP_Astral_500pg_12ms 7794 7972 7972 7982 +188 +10 +10 +2.4121% +0.1254% +0.1254%
SCP_Astral_500pg_24ms 9158 9342 9342 9382 +224 +40 +40 +2.4459% +0.4282% +0.4282%
SCP_Astral_500pg_3ms 1846 2059 +213 +11.5385%
SCP_Astral_500pg_6ms 3874 4155 4155 4129 +255 -26 -26 +6.5823% -0.6258% -0.6258%
SCP_Astral_MBR 24110 25035 25035 24923 +813 -112 -112 +3.3720% -0.4474% -0.4474%
Seer_Astral_45 69584 89971 89971 58758 -10826 -31213 -31213 -15.5582% -34.6923% -34.6923%
Seer_Astral_single 56522 56522 56577 +55 +55 +0.0973% +0.0973%
YEAST_KO_Astral 66823 87992 87947 8654 -58169 -79338 -79293 -87.0494% -90.1650% -90.1600%
EWZ_2P_MBR_Exploris 50700 56121 56121 55894 +5194 -227 -227 +10.2446% -0.4045% -0.4045%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56042 +5451 -279 -279 +10.7746% -0.4954% -0.4954%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455 723513 +120235 +322 -2942 +19.9303% +0.0445% -0.4050%
KEAP1KO_Eclipse 87920 92814 92814 93070 +5150 +256 +256 +5.8576% +0.2758% +0.2758%
MTAC_3P_Alternating 63773 64043 64043 63696 -77 -347 -347 -0.1207% -0.5418% -0.5418%
MTAC_3P_Standard 64317 64591 64591 64148 -169 -443 -443 -0.2628% -0.6859% -0.6859%
MTAC_Yeast_Alternating_3min 12100 12100 12018 -82 -82 -0.6777% -0.6777%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12383 -49 -28 -30 -0.3941% -0.2256% -0.2417%
MTAC_Yeast_Standard_3min 12008 12020 12034 12044 +36 +24 +10 +0.2998% +0.1997% +0.0831%
MTAC_Yeast_Standard_5min 12561 12508 12508 12414 -147 -94 -94 -1.1703% -0.7515% -0.7515%
Olsen_Astral_3P 236395 245754 245754 243322 +6927 -2432 -2432 +2.9303% -0.9896% -0.9896%
Olsen_Exploris_3P 146224 153802 153802 153190 +6966 -612 -612 +4.7639% -0.3979% -0.3979%
SCIEX_3P 70810 74209 74209 73848 +3038 -361 -361 +4.2904% -0.4865% -0.4865%
SCP_Astral_1000pg_12ms 9163 9538 9538 9533 +370 -5 -5 +4.0380% -0.0524% -0.0524%
SCP_Astral_1000pg_24ms 9298 9857 9852 9740 +442 -117 -112 +4.7537% -1.1870% -1.1368%
SCP_Astral_1000pg_3ms 2450 6084 6084 6253 +3803 +169 +169 +155.2245% +2.7778% +2.7778%
SCP_Astral_1000pg_6ms 4703 4588 4588 4815 +112 +227 +227 +2.3815% +4.9477% +4.9477%
SCP_Astral_10ng_12ms 16190 16202 16202 16284 +94 +82 +82 +0.5806% +0.5061% +0.5061%
SCP_Astral_10ng_24ms 13599 13792 13697 13797 +198 +5 +100 +1.4560% +0.0363% +0.7301%
SCP_Astral_10ng_6ms 17017 17179 17127 17025 +8 -154 -102 +0.0470% -0.8964% -0.5956%
SCP_Astral_10ng_ms 16252 16276 16276 16226 -26 -50 -50 -0.1600% -0.3072% -0.3072%
SCP_Astral_250pg_12ms 3647 3913 3913 3855 +208 -58 -58 +5.7033% -1.4822% -1.4822%
SCP_Astral_250pg_24ms 4300 4603 4603 4734 +434 +131 +131 +10.0930% +2.8460% +2.8460%
SCP_Astral_250pg_3ms 576 22 22 621 +45 +599 +599 +7.8125% +2722.7273% +2722.7273%
SCP_Astral_250pg_6ms 637 2080 2080 2053 +1416 -27 -27 +222.2920% -1.2981% -1.2981%
SCP_Astral_500pg_12ms 6245 6346 6346 6272 +27 -74 -74 +0.4323% -1.1661% -1.1661%
SCP_Astral_500pg_24ms 6722 6729 6729 6695 -27 -34 -34 -0.4017% -0.5053% -0.5053%
SCP_Astral_500pg_3ms 982 1285 +303 +30.8554%
SCP_Astral_500pg_6ms 3708 4007 4007 3970 +262 -37 -37 +7.0658% -0.9234% -0.9234%
SCP_Astral_MBR 20165 20214 20214 20071 -94 -143 -143 -0.4662% -0.7074% -0.7074%
Seer_Astral_45 225377 241502 241502 239864 +14487 -1638 -1638 +6.4279% -0.6783% -0.6783%
Seer_Astral_single 4662 4662 4722 +60 +60 +1.2870% +1.2870%
YEAST_KO_Astral 1300836 1388950 1386974 1359089 +58253 -29861 -27885 +4.4781% -2.1499% -2.0105%
EWZ_2P_MBR_Exploris 239484 245804 245804 246421 +6937 +617 +617 +2.8966% +0.2510% +0.2510%
EWZ_2P_noMBR_Exploris 235990 245406 245406 244614 +8624 -792 -792 +3.6544% -0.3227% -0.3227%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358 28580 +6840 +20 +222 +31.4627% +0.0700% +0.7828%
KEAP1KO_Eclipse 7845 8174 8174 8170 +325 -4 -4 +4.1428% -0.0489% -0.0489%
MTAC_3P_Alternating 11361 11494 11494 11399 +38 -95 -95 +0.3345% -0.8265% -0.8265%
MTAC_3P_Standard 11473 11609 11609 11517 +44 -92 -92 +0.3835% -0.7925% -0.7925%
MTAC_Yeast_Alternating_3min 4135 4135 4101 -34 -34 -0.8222% -0.8222%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4231 +16 +2 -1 +0.3796% +0.0473% -0.0236%
MTAC_Yeast_Standard_3min 4075 4100 4113 4117 +42 +17 +4 +1.0307% +0.4146% +0.0973%
MTAC_Yeast_Standard_5min 4249 4249 4249 4213 -36 -36 -36 -0.8473% -0.8473% -0.8473%
Olsen_Astral_3P 13820 14399 14399 14266 +446 -133 -133 +3.2272% -0.9237% -0.9237%
Olsen_Exploris_3P 7255 7623 7623 7607 +352 -16 -16 +4.8518% -0.2099% -0.2099%
SCIEX_3P 8652 9081 9081 9016 +364 -65 -65 +4.2071% -0.7158% -0.7158%
SCP_Astral_1000pg_12ms 3245 3397 3397 3406 +161 +9 +9 +4.9615% +0.2649% +0.2649%
SCP_Astral_1000pg_24ms 3254 3466 3469 3422 +168 -44 -47 +5.1629% -1.2695% -1.3549%
SCP_Astral_1000pg_3ms 2450 2396 2396 2450 +0 +54 +54 +0% +2.2538% +2.2538%
SCP_Astral_1000pg_6ms 2508 2436 2436 2531 +23 +95 +95 +0.9171% +3.8998% +3.8998%
SCP_Astral_10ng_12ms 5579 5627 5627 5656 +77 +29 +29 +1.3802% +0.5154% +0.5154%
SCP_Astral_10ng_24ms 4721 4803 4754 4832 +111 +29 +78 +2.3512% +0.6038% +1.6407%
SCP_Astral_10ng_6ms 5846 5950 5930 5902 +56 -48 -28 +0.9579% -0.8067% -0.4722%
SCP_Astral_10ng_ms 5611 5655 5655 5621 +10 -34 -34 +0.1782% -0.6012% -0.6012%
SCP_Astral_250pg_12ms 1292 1424 1424 1400 +108 -24 -24 +8.3591% -1.6854% -1.6854%
SCP_Astral_250pg_24ms 1568 1660 1660 1754 +186 +94 +94 +11.8622% +5.6627% +5.6627%
SCP_Astral_250pg_3ms 307 8 8 232 -75 +224 +224 -24.4300% +2800% +2800%
SCP_Astral_250pg_6ms 637 756 756 753 +116 -3 -3 +18.2104% -0.3968% -0.3968%
SCP_Astral_500pg_12ms 2207 2275 2275 2240 +33 -35 -35 +1.4952% -1.5385% -1.5385%
SCP_Astral_500pg_24ms 2403 2388 2388 2368 -35 -20 -20 -1.4565% -0.8375% -0.8375%
SCP_Astral_500pg_3ms 525 460 -65 -12.3810%
SCP_Astral_500pg_6ms 1318 1447 1447 1436 +118 -11 -11 +8.9530% -0.7602% -0.7602%
SCP_Astral_MBR 4708 4754 4754 4718 +10 -36 -36 +0.2124% -0.7573% -0.7573%
Seer_Astral_45 5802 6299 6299 6206 +404 -93 -93 +6.9631% -1.4764% -1.4764%
Seer_Astral_single 4662 4662 4722 +60 +60 +1.2870% +1.2870%
YEAST_KO_Astral 4565 4793 4786 4686 +121 -107 -100 +2.6506% -2.2324% -2.0894%
EWZ_2P_MBR_Exploris 6831 7038 7038 7068 +237 +30 +30 +3.4695% +0.4263% +0.4263%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7073 +215 -42 -42 +3.1350% -0.5903% -0.5903%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0009 -0.0003 -0.0006 -0.0006
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0002 +0.0003 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0001 +0.0015 -0.0000 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0013 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0015 -0.0011 -0.0003 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0014 +0.0005 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0014 -0.0004 +0.0005
Olsen_Astral_3P_Entrapment -0.0015 -0.0011 -0.0009 +0.0006 +0.0002
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 0.0005 +0.0007 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 0.0002 +0.0007 +0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0015 +0.0007 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0035 +0.0019 -0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0043 -0.0013 -0.0006 -0.0006
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0026 -0.0023 -0.0014 -0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0025 -0.0003 -0.0002 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0004 +0.0017 -0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0022 +0.0002 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 0.0003 +0.0011 +0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0030 -0.0028 -0.0018
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0074 -0.0023
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0015 +0.0006 +0.0004 +0.0004
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0024 -0.0011 +0.0007
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0037 -0.0024
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0032 -0.0001 -0.0001
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0011 +0.0015 +0.0006
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025 -0.0022 +0.0002 +0.0003 +0.0003

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0024 -0.0014 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0004 +0.0006 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0022 -0.0009 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0033 +0.0017 +0.0017
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0036 +0.0005 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0035 +0.0023 +0.0015 +0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0041 -0.0005 +0.0004
Olsen_Astral_3P_Entrapment -0.0041 -0.0034 -0.0029 +0.0011 +0.0005
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0014 +0.0015 -0.0016
SCIEX_3P_Entrapment -0.0031 -0.0032 -0.0042 -0.0011 -0.0010
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0036 +0.0013 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0057 +0.0013 +0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0067 -0.0008 -0.0031 -0.0031
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0033 -0.0015 +0.0016 +0.0016
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0051 +0.0003 -0.0002 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0032 +0.0000 -0.0009
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0064 -0.0027 +0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0029 +0.0025 -0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0027 +0.0014 +0.0014
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 -0.0089 -0.0061 -0.0089 -0.0089
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0064 +0.0035 +0.0002 +0.0002
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0039 -0.0004 +0.0015 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0006 +0.0014 +0.0003
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0028 +0.0013 -0.0099
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 0.0014 +0.0059 +0.0060 +0.0060
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0025 +0.0034 -0.0007
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049 -0.0043 +0.0022 +0.0006 +0.0006

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0008 -0.0003 -0.0004 -0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0002 +0.0003 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 0.0001 +0.0010 -0.0000 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0008 +0.0005 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0008 -0.0004 -0.0000 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0009 -0.0000 -0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0009 -0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0004 -0.0004 +0.0005 +0.0001
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0007 +0.0011 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0001 +0.0004 +0.0000
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0016 -0.0001 -0.0003
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0029 +0.0017 -0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0031 -0.0011 -0.0009 -0.0009
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0019 -0.0021 -0.0013 -0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0015 +0.0002 -0.0003 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0004 +0.0009 -0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0018 +0.0001 +0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 0.0004 +0.0009 +0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0018 -0.0010 -0.0009
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0057 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0013 +0.0006 -0.0001 -0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0018 -0.0002 +0.0002
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0025 -0.0044
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0024 +0.0002 +0.0002
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0013 +0.0005 +0.0002
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006 -0.0008 +0.0004 -0.0002 -0.0002

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0001 +0.0000 -0.0002 -0.0002
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0011 -0.0002 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0023 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0020 +0.0017 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0026 +0.0011 +0.0005 +0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0025 -0.0003 +0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0024 -0.0018 +0.0007 +0.0006
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0007 +0.0020 -0.0012
SCIEX_3P_Entrapment -0.0036 -0.0031 -0.0033 +0.0002 -0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0022 +0.0015 +0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0054 -0.0006 +0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0044 -0.0000 -0.0028 -0.0028
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0020 +0.0005 +0.0015 +0.0015
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0041 +0.0006 -0.0009 -0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0026 +0.0006 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0042 -0.0021 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0031 +0.0008 -0.0001
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0015 -0.0002 +0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0035 +0.0025 +0.0046 +0.0046
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0050 +0.0050 +0.0019 +0.0019
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0025 +0.0015 +0.0016 +0.0016
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 0.0007 +0.0026 +0.0008
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0035 -0.0003 -0.0101
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0017 +0.0003 +0.0005 +0.0005
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0014 +0.0010 +0.0002
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029 -0.0026 +0.0016 +0.0004 +0.0004

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0089 -0.0042 +0.0022 +0.0022

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.0037 -0.0438 -0.4049 -0.4049

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 2 +1 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 12 +4 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 12 +4 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 12 +3 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1414 -0.0045 -0.0009 -0.0009
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1355 -0.0038 -0.0009 -0.0009
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1453 -0.0003 -0.0003
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1399 -0.0132 -0.0004 -0.0005
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1636 -0.0062 -0.0008 -0.0005
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1367 -0.0136 -0.0002 -0.0002
Olsen_Astral_3P 0.0823 0.0884 0.0884 0.0938 +0.0115 +0.0054 +0.0054
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1497 +0.0017 -0.0002 -0.0002
SCIEX_3P 0.1284 0.1281 0.1281 0.1277 -0.0007 -0.0004 -0.0004

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0732 -0.0031 -0.0005 -0.0005
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0698 -0.0026 -0.0007 -0.0007
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0673 +0.0003 +0.0003
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0597 -0.0181 +0.0001 -0.0001
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0768 -0.0024 -0.0004 -0.0004
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0564 -0.0206 -0.0003 -0.0003
Olsen_Astral_3P 0.0374 0.0373 0.0373 0.0369 -0.0005 -0.0004 -0.0004
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1017 -0.0012 -0.0003 -0.0003
SCIEX_3P 0.0864 0.0834 0.0834 0.0831 -0.0033 -0.0004 -0.0004

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0703 -0.0024 +0 +0.0013
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0353 -0.0079 +0 +0.0000
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0038 +0.0017 +0 -0.0005
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1263 +0.0015 +0 +0.0003
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0729 -0.0055 +0 -0.0001
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0239 -0.0083 +0 -0.0015
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 -0.1151 +0.0114 +0 +0.0467
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 -0.2437 +0.0117 +0 +0.0307
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0872 -0.0069 +0 +0.0747
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 -0.0160 +0.0067 +0 +0.0056
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 -0.3332 +0.0083 +0 -0.0009
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 0.0715 -0.0025 +0 -0.0037
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 0.0778 +0.0108 +0 -0.0086
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 -0.2311 +0.0011 +0 +0.0036
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 0.2129 +0.0262 +0 -0.0073
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2214 -0.0038 +0 -0.0020
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0754 +0.0068 +0 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2771 +0.0186 +0 +0.0030
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1005 +0.0049 +0 +0.0002
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0542 +0.0004 +0 +0.0003
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2052 +0.0054 +0 -0.0001
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0464 -0.0014 +0 +0.0000
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1118 +0.0042 +0 +0.0000
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0750 +0.0227 +0 -0.0156
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 -0.0709 +0.0187 +0 -0.0009
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0538 -0.0042 +0 -0.0001
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 0.0094 -0.0050 +0 -0.0001
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 -0.0452 +0.0117 +0 +0.0001
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0567 -0.0241 +0 +0.0003
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0151 -0.0332 +0 -0.0001
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 -0.0186 +0.0110 +0 -0.0008
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0708 -0.0352 +0 -0.0003
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0448 -0.0479 +0 +0.0015

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0642 +0.0011 +0 -0.0022
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0365 -0.0083 +0 -0.0003
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0076 +0.0048 +0 +0.0012
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1245 +0.0000 +0 +0.0001
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0707 -0.0064 +0 -0.0001
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0234 -0.0075 +0 -0.0013
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 -0.0606 +0.0198 +0 -0.0045
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 -0.1797 +0.0046 +0 +0.0137
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 0.0349 -0.0344 +0 +0.0093
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 -0.0213 +0.0070 +0 -0.0006
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 -0.3004 +0.0075 +0 +0.0001
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 0.0696 -0.0001 +0 -0.0003
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 0.0675 +0.0118 +0 +0.0015
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 -0.1994 +0.0003 +0 -0.0003
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 0.1989 +0.0273 +0 +0.0026
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2121 -0.0039 +0 -0.0012
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0727 +0.0080 +0 -0.0016
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.3012 +0.0484 +0 -0.0030
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0870 +0.0037 +0 -0.0008
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0506 +0.0006 +0 -0.0002
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2027 +0.0038 +0 +0.0001
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0433 -0.0047 +0 +0.0047
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1128 +0.0068 +0 -0.0035
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0960 +0.0509 +0 -0.0083
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 -0.0656 +0.0198 +0 +0.0043
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0456 -0.0072 +0 -0.0003
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 0.0137 +0.0003 +0 -0.0016
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 -0.0446 +0.0132 +0 -0.0004
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0586 -0.0239 +0 +0.0006
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0142 -0.0349 +0 +0.0002
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 -0.0225 +0.0141 +0 -0.0008
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0669 -0.0420 +0 -0.0062
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0478 -0.0520 +0 -0.0022

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2936 +0.0367 +0 -0.0050
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2150 +0.0142 +0 +0.0024
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2683 +0.0148 +0 -0.0023
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.3052 +0.0404 +0 -0.0033
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2217 +0.0168 +0 -0.0013
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2753 +0.0186 +0 +0.0013
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 0.8215 +0.0550 +0 +0.2227
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 0.4134 +0.0384 +0 +0.0183
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 1.8493 +0.1923 +0 +0.4888
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 0.2545 +0.0439 +0 +0.0006
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 0.3270 +0.0486 +0 -0.0146
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 0.3511 +0.0538 +0 -0.0073
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 0.3432 +0.0371 +0 +0.0124
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 0.2892 +0.0296 +0 +0.0043
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 0.5910 +0.0788 +0 +0.0347
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.6060 +0.0339 +0 -0.0062
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1569 -0.0061 +0 +0.0002
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.8316 +0.0041 +0 +0.0232
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3410 +0.0015 +0 +0.0022
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1738 +0.0655 +0 -0.0012
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3330 +0.0280 +0 +0.0026
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.6202 -0.0228 +0 +0.0241
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2463 +0.0964 +0 +0.0001
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.1956 +0.0666 +0 +0.0431
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 0.5497 +0.0340 +0 +0.0149
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 0.6006 +0.0136 +0 +0.0015
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 0.1453 -0.0003 +0 -0.0010
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 0.2154 +0.0190 +0 +0.0022
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 0.2421 +0.0284 +0 -0.0033
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 0.2013 +0.0280 +0 +0.0028
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 0.2447 +0.0124 +0 -0.0018
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 0.6405 +0.0431 +0 +0.0255
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 0.5527 +0.0632 +0 +0.0014

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1391 +0.0230 +0 -0.0134
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0695 +0.0026 +0 -0.0061
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1109 -0.0177 +0 -0.0014
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1200 -0.0076 +0 -0.0044
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0652 +0.0026 +0 -0.0054
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1277 +0.0033 +0 -0.0018
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 0.2414 +0.0399 +0 +0.0091
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 0.1305 +0.0252 +0 -0.0036
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 0.4936 +0.0889 +0 +0.0643
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 0.0480 +0.0025 +0 +0.0035
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 0.0618 +0.0100 +0 -0.0031
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 0.0542 +0.0069 +0 -0.0055
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 0.0540 -0.0030 +0 +0.0006
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 0.0551 +0.0023 +0 +0.0046
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 0.1209 +0.0328 +0 -0.0077
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2548 +0.0457 +0 +0.0058
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0551 -0.0061 +0 -0.0025
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.4555 -0.0364 +0 +0.0335
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0581 -0.0059 +0 -0.0006
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0336 +0.0045 +0 -0.0010
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0766 -0.0018 +0 +0.0025
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.1999 -0.0276 +0 -0.0061
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0712 +0.0043 +0 -0.0046
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.4308 -0.1098 +0 +0.0097
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 0.2849 +0.1039 +0 -0.0381
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 0.2651 +0.0434 +0 -0.0431
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 0.0715 +0.0076 +0 +0.0065
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 0.0573 -0.0052 +0 -0.0032
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 0.0676 -0.0076 +0 +0.0021
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 0.0615 +0.0059 +0 -0.0000
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 0.0959 -0.0129 +0 -0.0009
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 0.3174 +0.0229 +0 +0.0007
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 0.2837 +0.0416 +0 -0.0110

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600 166.6500 -80.5800 -77.6200 -80.5100 -32.5931% -31.7763% -32.5740%
KEAP1KO_Eclipse 24.0700 22.8000 19.6500
MTAC_3P_Alternating 12.7500 13.6800 8.5700
MTAC_3P_Standard 12.3100 13.0600 10.2700
MTAC_Yeast_Alternating_3min 5.4900 4.0600
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400
YEAST_KO_Astral 235.6300 216.9300 213.3300 139.3400 -96.2900 -77.5900 -73.9900 -40.8649% -35.7673% -34.6834%
EWZ_2P_MBR_Exploris 29 29.1900 24.7500
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Astral_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCIEX_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

YEAST_KO_Astral_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png