Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374 7562577 +2063241 -207551 -271797 +37.5180% -2.6711% -3.4693%
KEAP1KO_Eclipse 1096494 1311411 1311411 1307201 +210707 -4210 -4210 +19.2164% -0.3210% -0.3210%
MTAC_3P_Alternating 586322 616475 616475 616201 +29879 -274 -274 +5.0960% -0.0444% -0.0444%
MTAC_3P_Standard 596590 623500 623500 623247 +26657 -253 -253 +4.4682% -0.0406% -0.0406%
MTAC_Yeast_Alternating_3min 137143 137143 137467 +324 +324 +0.2362% +0.2362%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156849 +1208 +116 +287 +0.7761% +0.0740% +0.1833%
MTAC_Yeast_Standard_3min 138509 139777 139662 139461 +952 -316 -201 +0.6873% -0.2261% -0.1439%
MTAC_Yeast_Standard_5min 158962 158983 158983 158782 -180 -201 -201 -0.1132% -0.1264% -0.1264%
Olsen_Astral_3P 3282083 3760070 3760070 3748393 +466310 -11677 -11677 +14.2077% -0.3106% -0.3106%
Olsen_Exploris_3P 1022736 1155533 1155533 1150976 +128240 -4557 -4557 +12.5389% -0.3944% -0.3944%
SCIEX_3P 672242 749418 749418 748814 +76572 -604 -604 +11.3905% -0.0806% -0.0806%
SCP_Astral_1000pg_12ms 40882 41855 41855 41559 +677 -296 -296 +1.6560% -0.7072% -0.7072%
SCP_Astral_1000pg_24ms 41069 42339 42344 42342 +1273 +3 -2 +3.0997% +0.0071% -0.0047%
SCP_Astral_1000pg_3ms 8740 23115 23115 23026 +14286 -89 -89 +163.4554% -0.3850% -0.3850%
SCP_Astral_1000pg_6ms 16935 17553 17553 17729 +794 +176 +176 +4.6885% +1.0027% +1.0027%
SCP_Astral_10ng_12ms 99908 102934 102934 103029 +3121 +95 +95 +3.1239% +0.0923% +0.0923%
SCP_Astral_10ng_24ms 71098 72525 72805 72824 +1726 +299 +19 +2.4276% +0.4123% +0.0261%
SCP_Astral_10ng_6ms 115157 117282 117413 117352 +2195 +70 -61 +1.9061% +0.0597% -0.0520%
SCP_Astral_10ng_ms 105704 106497 106497 106425 +721 -72 -72 +0.6821% -0.0676% -0.0676%
SCP_Astral_250pg_12ms 10194 10806 10806 10787 +593 -19 -19 +5.8171% -0.1758% -0.1758%
SCP_Astral_250pg_24ms 14807 15433 15433 15560 +753 +127 +127 +5.0854% +0.8229% +0.8229%
SCP_Astral_250pg_3ms 1261 2032 2032 2041 +780 +9 +9 +61.8557% +0.4429% +0.4429%
SCP_Astral_250pg_6ms 1436 4783 4783 4761 +3325 -22 -22 +231.5460% -0.4600% -0.4600%
SCP_Astral_500pg_12ms 21710 21895 21895 21962 +252 +67 +67 +1.1608% +0.3060% +0.3060%
SCP_Astral_500pg_24ms 25860 26143 26143 26140 +280 -3 -3 +1.0828% -0.0115% -0.0115%
SCP_Astral_500pg_3ms 3484 5693 +2209 +63.4041%
SCP_Astral_500pg_6ms 10699 11474 11474 11454 +755 -20 -20 +7.0567% -0.1743% -0.1743%
SCP_Astral_MBR 92167 93648 93648 93766 +1599 +118 +118 +1.7349% +0.1260% +0.1260%
Seer_Astral_45 2512737 3122633 3122633 3120057 +607320 -2576 -2576 +24.1697% -0.0825% -0.0825%
Seer_Astral_single 56522 56522 56832 +310 +310 +0.5485% +0.5485%
YEAST_KO_Astral 16088274 20363242 20387044 18634937 +2546663 -1728305 -1752107 +15.8293% -8.4874% -8.5942%
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1793381 +130387 -11867 -11867 +7.8405% -0.6574% -0.6574%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1760315 +151409 -10444 -10444 +9.4107% -0.5898% -0.5898%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564 50444 -195724 -380177 -381120 -79.5083% -88.2858% -88.3114%
KEAP1KO_Eclipse 111504 133648 133648 133322 +21818 -326 -326 +19.5670% -0.2439% -0.2439%
MTAC_3P_Alternating 108267 117420 117420 117343 +9076 -77 -77 +8.3830% -0.0656% -0.0656%
MTAC_3P_Standard 110265 118733 118733 118622 +8357 -111 -111 +7.5790% -0.0935% -0.0935%
MTAC_Yeast_Alternating_3min 48709 48709 48821 +112 +112 +0.2299% +0.2299%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55235 +1266 -135 +38 +2.3458% -0.2438% +0.0688%
MTAC_Yeast_Standard_3min 48621 50039 49836 49722 +1101 -317 -114 +2.2645% -0.6335% -0.2288%
MTAC_Yeast_Standard_5min 55060 56122 56122 55913 +853 -209 -209 +1.5492% -0.3724% -0.3724%
Olsen_Astral_3P 198770 231187 231187 122063 -76707 -109124 -109124 -38.5908% -47.2016% -47.2016%
Olsen_Exploris_3P 51272 58902 58902 58634 +7362 -268 -268 +14.3587% -0.4550% -0.4550%
SCIEX_3P 82206 93832 93832 93825 +11619 -7 -7 +14.1340% -0.0075% -0.0075%
SCP_Astral_1000pg_12ms 14440 15016 15016 14912 +472 -104 -104 +3.2687% -0.6926% -0.6926%
SCP_Astral_1000pg_24ms 14483 15025 15026 14973 +490 -52 -53 +3.3833% -0.3461% -0.3527%
SCP_Astral_1000pg_3ms 8740 9376 9376 9329 +589 -47 -47 +6.7391% -0.5013% -0.5013%
SCP_Astral_1000pg_6ms 8898 9259 9259 9356 +458 +97 +97 +5.1472% +1.0476% +1.0476%
SCP_Astral_10ng_12ms 34865 36293 36293 36284 +1419 -9 -9 +4.0700% -0.0248% -0.0248%
SCP_Astral_10ng_24ms 24649 25391 25531 25534 +885 +143 +3 +3.5904% +0.5632% +0.0118%
SCP_Astral_10ng_6ms 40156 41556 41511 41554 +1398 -2 +43 +3.4814% -0.0048% +0.1036%
SCP_Astral_10ng_ms 36688 37676 37676 37639 +951 -37 -37 +2.5921% -0.0982% -0.0982%
SCP_Astral_250pg_12ms 3666 3949 3949 3949 +283 +0 +0 +7.7196% +0% +0%
SCP_Astral_250pg_24ms 5299 5611 5611 5668 +369 +57 +57 +6.9636% +1.0159% +1.0159%
SCP_Astral_250pg_3ms 675 721 721 722 +47 +1 +1 +6.9630% +0.1387% +0.1387%
SCP_Astral_250pg_6ms 1436 1738 1738 1731 +295 -7 -7 +20.5432% -0.4028% -0.4028%
SCP_Astral_500pg_12ms 7794 7972 7972 8007 +213 +35 +35 +2.7329% +0.4390% +0.4390%
SCP_Astral_500pg_24ms 9158 9342 9342 9334 +176 -8 -8 +1.9218% -0.0856% -0.0856%
SCP_Astral_500pg_3ms 1846 2060 +214 +11.5926%
SCP_Astral_500pg_6ms 3874 4155 4155 4155 +281 +0 +0 +7.2535% +0% +0%
SCP_Astral_MBR 24110 25035 25035 25075 +965 +40 +40 +4.0025% +0.1598% +0.1598%
Seer_Astral_45 69584 89971 89971 58376 -11208 -31595 -31595 -16.1072% -35.1169% -35.1169%
Seer_Astral_single 56522 56522 56832 +310 +310 +0.5485% +0.5485%
YEAST_KO_Astral 66823 87992 87947 8757 -58066 -79235 -79190 -86.8952% -90.0480% -90.0429%
EWZ_2P_MBR_Exploris 50700 56121 56121 55646 +4946 -475 -475 +9.7554% -0.8464% -0.8464%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56216 +5625 -105 -105 +11.1186% -0.1864% -0.1864%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455 709002 +105724 -14189 -17453 +17.5249% -1.9620% -2.4025%
KEAP1KO_Eclipse 87920 92814 92814 92846 +4926 +32 +32 +5.6028% +0.0345% +0.0345%
MTAC_3P_Alternating 63773 64043 64043 63974 +201 -69 -69 +0.3152% -0.1077% -0.1077%
MTAC_3P_Standard 64317 64591 64591 64586 +269 -5 -5 +0.4182% -0.0077% -0.0077%
MTAC_Yeast_Alternating_3min 12100 12100 12110 +10 +10 +0.0826% +0.0826%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12472 +40 +61 +59 +0.3218% +0.4915% +0.4753%
MTAC_Yeast_Standard_3min 12008 12020 12034 12080 +72 +60 +46 +0.5996% +0.4992% +0.3823%
MTAC_Yeast_Standard_5min 12561 12508 12508 12450 -111 -58 -58 -0.8837% -0.4637% -0.4637%
Olsen_Astral_3P 236395 245754 245754 244237 +7842 -1517 -1517 +3.3173% -0.6173% -0.6173%
Olsen_Exploris_3P 146224 153802 153802 152247 +6023 -1555 -1555 +4.1190% -1.0110% -1.0110%
SCIEX_3P 70810 74209 74209 74271 +3461 +62 +62 +4.8877% +0.0835% +0.0835%
SCP_Astral_1000pg_12ms 9163 9538 9538 9524 +361 -14 -14 +3.9398% -0.1468% -0.1468%
SCP_Astral_1000pg_24ms 9298 9857 9852 9737 +439 -120 -115 +4.7214% -1.2174% -1.1673%
SCP_Astral_1000pg_3ms 2450 6084 6084 6268 +3818 +184 +184 +155.8367% +3.0243% +3.0243%
SCP_Astral_1000pg_6ms 4703 4588 4588 4829 +126 +241 +241 +2.6791% +5.2528% +5.2528%
SCP_Astral_10ng_12ms 16190 16202 16202 16369 +179 +167 +167 +1.1056% +1.0307% +1.0307%
SCP_Astral_10ng_24ms 13599 13792 13697 13817 +218 +25 +120 +1.6031% +0.1813% +0.8761%
SCP_Astral_10ng_6ms 17017 17179 17127 17206 +189 +27 +79 +1.1107% +0.1572% +0.4613%
SCP_Astral_10ng_ms 16252 16276 16276 16213 -39 -63 -63 -0.2400% -0.3871% -0.3871%
SCP_Astral_250pg_12ms 3647 3913 3913 3855 +208 -58 -58 +5.7033% -1.4822% -1.4822%
SCP_Astral_250pg_24ms 4300 4603 4603 4776 +476 +173 +173 +11.0698% +3.7584% +3.7584%
SCP_Astral_250pg_3ms 576 22 22 530 -46 +508 +508 -7.9861% +2309.0909% +2309.0909%
SCP_Astral_250pg_6ms 637 2080 2080 1674 +1037 -406 -406 +162.7943% -19.5192% -19.5192%
SCP_Astral_500pg_12ms 6245 6346 6346 6277 +32 -69 -69 +0.5124% -1.0873% -1.0873%
SCP_Astral_500pg_24ms 6722 6729 6729 6653 -69 -76 -76 -1.0265% -1.1294% -1.1294%
SCP_Astral_500pg_3ms 982 1609 +627 +63.8493%
SCP_Astral_500pg_6ms 3708 4007 4007 3982 +274 -25 -25 +7.3894% -0.6239% -0.6239%
SCP_Astral_MBR 20165 20214 20214 20247 +82 +33 +33 +0.4066% +0.1633% +0.1633%
Seer_Astral_45 225377 241502 241502 237554 +12177 -3948 -3948 +5.4029% -1.6348% -1.6348%
Seer_Astral_single 4662 4662 4720 +58 +58 +1.2441% +1.2441%
YEAST_KO_Astral 1300836 1388950 1386974 1288419 -12417 -100531 -98555 -0.9545% -7.2379% -7.1058%
EWZ_2P_MBR_Exploris 239484 245804 245804 241978 +2494 -3826 -3826 +1.0414% -1.5565% -1.5565%
EWZ_2P_noMBR_Exploris 235990 245406 245406 243414 +7424 -1992 -1992 +3.1459% -0.8117% -0.8117%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358 27048 +5308 -1512 -1310 +24.4158% -5.2941% -4.6195%
KEAP1KO_Eclipse 7845 8174 8174 8177 +332 +3 +3 +4.2320% +0.0367% +0.0367%
MTAC_3P_Alternating 11361 11494 11494 11462 +101 -32 -32 +0.8890% -0.2784% -0.2784%
MTAC_3P_Standard 11473 11609 11609 11612 +139 +3 +3 +1.2115% +0.0258% +0.0258%
MTAC_Yeast_Alternating_3min 4135 4135 4149 +14 +14 +0.3386% +0.3386%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4243 +28 +14 +11 +0.6643% +0.3310% +0.2599%
MTAC_Yeast_Standard_3min 4075 4100 4113 4142 +67 +42 +29 +1.6442% +1.0244% +0.7051%
MTAC_Yeast_Standard_5min 4249 4249 4249 4229 -20 -20 -20 -0.4707% -0.4707% -0.4707%
Olsen_Astral_3P 13820 14399 14399 14323 +503 -76 -76 +3.6397% -0.5278% -0.5278%
Olsen_Exploris_3P 7255 7623 7623 7565 +310 -58 -58 +4.2729% -0.7609% -0.7609%
SCIEX_3P 8652 9081 9081 9095 +443 +14 +14 +5.1202% +0.1542% +0.1542%
SCP_Astral_1000pg_12ms 3245 3397 3397 3411 +166 +14 +14 +5.1156% +0.4121% +0.4121%
SCP_Astral_1000pg_24ms 3254 3466 3469 3420 +166 -46 -49 +5.1014% -1.3272% -1.4125%
SCP_Astral_1000pg_3ms 2450 2396 2396 2457 +7 +61 +61 +0.2857% +2.5459% +2.5459%
SCP_Astral_1000pg_6ms 2508 2436 2436 2536 +28 +100 +100 +1.1164% +4.1051% +4.1051%
SCP_Astral_10ng_12ms 5579 5627 5627 5677 +98 +50 +50 +1.7566% +0.8886% +0.8886%
SCP_Astral_10ng_24ms 4721 4803 4754 4808 +87 +5 +54 +1.8428% +0.1041% +1.1359%
SCP_Astral_10ng_6ms 5846 5950 5930 5973 +127 +23 +43 +2.1724% +0.3866% +0.7251%
SCP_Astral_10ng_ms 5611 5655 5655 5622 +11 -33 -33 +0.1960% -0.5836% -0.5836%
SCP_Astral_250pg_12ms 1292 1424 1424 1399 +107 -25 -25 +8.2817% -1.7556% -1.7556%
SCP_Astral_250pg_24ms 1568 1660 1660 1728 +160 +68 +68 +10.2041% +4.0964% +4.0964%
SCP_Astral_250pg_3ms 307 8 8 218 -89 +210 +210 -28.9902% +2625% +2625%
SCP_Astral_250pg_6ms 637 756 756 591 -46 -165 -165 -7.2214% -21.8254% -21.8254%
SCP_Astral_500pg_12ms 2207 2275 2275 2241 +34 -34 -34 +1.5406% -1.4945% -1.4945%
SCP_Astral_500pg_24ms 2403 2388 2388 2346 -57 -42 -42 -2.3720% -1.7588% -1.7588%
SCP_Astral_500pg_3ms 525 589 +64 +12.1905%
SCP_Astral_500pg_6ms 1318 1447 1447 1440 +122 -7 -7 +9.2564% -0.4838% -0.4838%
SCP_Astral_MBR 4708 4754 4754 4766 +58 +12 +12 +1.2319% +0.2524% +0.2524%
Seer_Astral_45 5802 6299 6299 6173 +371 -126 -126 +6.3943% -2.0003% -2.0003%
Seer_Astral_single 4662 4662 4720 +58 +58 +1.2441% +1.2441%
YEAST_KO_Astral 4565 4793 4786 4523 -42 -270 -263 -0.9200% -5.6332% -5.4952%
EWZ_2P_MBR_Exploris 6831 7038 7038 6907 +76 -131 -131 +1.1126% -1.8613% -1.8613%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7063 +205 -52 -52 +2.9892% -0.7309% -0.7309%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0002 +0.0004 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0007 -0.0002 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0003 +0.0017 +0.0001 +0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0024 -0.0004 -0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0011 -0.0007 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0017 -0.0007 +0.0002
Olsen_Astral_3P_Entrapment -0.0015 -0.0011 -0.0010 +0.0005 +0.0001
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 0.0005 +0.0007 +0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001 0.0005 +0.0010 +0.0006
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0023 -0.0000 -0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0037 +0.0016 -0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0045 -0.0015 -0.0008 -0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0024 -0.0022 -0.0013 -0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0018 +0.0004 +0.0005 +0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 0.0006 +0.0027 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0025 -0.0001 +0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 0.0005 +0.0013 +0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0058 -0.0019 -0.0017
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0014 -0.0012 -0.0002
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0085 -0.0034
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0017 +0.0005 +0.0003 +0.0003
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0001 +0.0011 +0.0030
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0037 -0.0024
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0019 +0.0011 +0.0011
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0015 +0.0012 +0.0002
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025 -0.0020 +0.0004 +0.0004 +0.0004

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0030 -0.0020 +0.0001 +0.0001
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0010 +0.0000 -0.0004 -0.0004
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0012 +0.0000 +0.0010 +0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0057 -0.0007 -0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0039 +0.0003 -0.0000 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0048 -0.0012 -0.0003
Olsen_Astral_3P_Entrapment -0.0041 -0.0034 -0.0029 +0.0012 +0.0005
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0011 +0.0018 -0.0014
SCIEX_3P_Entrapment -0.0031 -0.0032 -0.0047 -0.0016 -0.0015
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0056 -0.0006 -0.0010
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0055 +0.0015 +0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0043 +0.0016 -0.0008 -0.0008
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0025 -0.0007 +0.0024 +0.0024
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0051 +0.0003 -0.0002 -0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0037 -0.0004 -0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0069 -0.0033 +0.0004
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0024 +0.0031 -0.0000
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0076 -0.0023 +0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0049 -0.0008 -0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 -0.0089 -0.0061 -0.0089 -0.0089
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0095 +0.0004 -0.0029 -0.0029
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0049 -0.0013 +0.0005 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0027 -0.0007 -0.0019
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0040 +0.0002 -0.0110
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0001 +0.0044 +0.0044 +0.0044
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0032 +0.0027 -0.0014
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049 -0.0022 +0.0043 +0.0027 +0.0027

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0004 +0.0001 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0000 +0.0001 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 0.0001 +0.0009 -0.0000 -0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0014 -0.0002 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0005 -0.0001 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0011 -0.0003 -0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0004 -0.0004 +0.0004 +0.0000
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0005 +0.0010 +0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001 0.0001 +0.0006 +0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0020 -0.0005 -0.0007
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 +0.0014 -0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0029 -0.0009 -0.0007 -0.0007
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0015 -0.0017 -0.0009 -0.0009
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0010 +0.0006 +0.0002 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 0.0003 +0.0016 -0.0001
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0020 -0.0000 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 0.0006 +0.0011 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0033 -0.0003 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0006 +0.0001 +0.0002
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0057 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0012 +0.0006 -0.0000 -0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0002 +0.0014 +0.0019
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0032 -0.0050
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0015 +0.0010 +0.0010
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0014 +0.0004 +0.0001
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006 -0.0008 +0.0005 -0.0002 -0.0002

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0006 -0.0005 -0.0007 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0008 +0.0000 +0.0004 +0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0030 +0.0000 +0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0018 +0.0019 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0030 -0.0007 -0.0003
Olsen_Astral_3P_Entrapment -0.0024 -0.0024 -0.0017 +0.0007 +0.0006
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0006 +0.0021 -0.0011
SCIEX_3P_Entrapment -0.0036 -0.0031 -0.0039 -0.0004 -0.0008
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0045 -0.0008 -0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0039 +0.0009 +0.0016
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0015 +0.0029 +0.0001 +0.0001
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0022 +0.0003 +0.0013 +0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0038 +0.0009 -0.0006 -0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0031 +0.0001 -0.0018
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0048 -0.0027 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0026 +0.0013 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0041 -0.0003 -0.0000
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0028 -0.0015 +0.0004
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0035 +0.0025 +0.0046 +0.0046
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0069 +0.0031 -0.0001 -0.0001
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0040 -0.0001 +0.0000 +0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0010 +0.0009 -0.0009
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0034 -0.0002 -0.0100
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0012 +0.0008 +0.0010 +0.0010
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0019 +0.0004 -0.0004
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029 -0.0014 +0.0027 +0.0015 +0.0015

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0030 -0.0101 -0.0037 -0.0037

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0 -0.0476 -0.4086 -0.4086

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 2 +0 +0 +2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 16 +4 +0 +3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 15 +4 +0 +2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 15 +3 +0 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1423 -0.0036 +0.0000 +0.0000
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1363 -0.0030 +0.0000 +0.0000
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1458 +0.0002 +0.0002
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1410 -0.0121 +0.0007 +0.0006
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1641 -0.0057 -0.0003 -0.0000
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1365 -0.0138 -0.0003 -0.0003
Olsen_Astral_3P 0.0823 0.0884 0.0884 0.0943 +0.0120 +0.0059 +0.0059
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1498 +0.0018 -0.0001 -0.0001
SCIEX_3P 0.1284 0.1281 0.1281 0.1281 -0.0003 -0.0000 -0.0000

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0737 -0.0026 -0.0000 -0.0000
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0704 -0.0019 -0.0000 -0.0000
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0665 -0.0005 -0.0005
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0605 -0.0173 +0.0009 +0.0007
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0763 -0.0030 -0.0009 -0.0009
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0562 -0.0208 -0.0005 -0.0005
Olsen_Astral_3P 0.0374 0.0373 0.0373 0.0371 -0.0003 -0.0002 -0.0002
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1016 -0.0012 -0.0004 -0.0004
SCIEX_3P 0.0864 0.0834 0.0834 0.0835 -0.0030 +0.0000 +0.0000

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0704 -0.0024 +0 +0.0014
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0356 -0.0079 +0 +0.0003
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0034 +0.0017 +0 -0.0009
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1254 +0.0015 +0 -0.0006
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0725 -0.0055 +0 -0.0005
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0259 -0.0083 +0 +0.0005
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 -0.1111 +0.0114 +0 +0.0426
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 -0.2449 +0.0117 +0 +0.0319
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0855 -0.0069 +0 +0.0730
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 -0.0156 +0.0067 +0 +0.0053
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 -0.3340 +0.0083 +0 -0.0000
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 0.0720 -0.0025 +0 -0.0032
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 0.0783 +0.0108 +0 -0.0080
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 -0.2323 +0.0011 +0 +0.0049
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 0.2144 +0.0262 +0 -0.0058
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2244 -0.0038 +0 +0.0010
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0758 +0.0068 +0 +0.0003
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2760 +0.0186 +0 +0.0019
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1007 +0.0049 +0 +0.0003
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0543 +0.0004 +0 +0.0004
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2049 +0.0054 +0 -0.0004
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0445 -0.0014 +0 -0.0019
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1118 +0.0042 +0 +0.0000
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0770 +0.0227 +0 -0.0136
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 -0.0701 +0.0187 +0 -0.0017
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0543 -0.0042 +0 +0.0005
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 0.0106 -0.0050 +0 +0.0010
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 -0.0451 +0.0117 +0 -0.0001
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0570 -0.0241 +0 +0.0006
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0156 -0.0332 +0 +0.0004
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 -0.0184 +0.0110 +0 -0.0010
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0702 -0.0352 +0 -0.0010
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0436 -0.0479 +0 +0.0002

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0640 +0.0011 +0 -0.0024
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0368 -0.0083 +0 -0.0000
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0057 +0.0048 +0 -0.0008
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1269 +0.0000 +0 +0.0025
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0704 -0.0064 +0 -0.0004
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0244 -0.0075 +0 -0.0003
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 -0.0611 +0.0198 +0 -0.0040
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 -0.1684 +0.0046 +0 +0.0025
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 0.0258 -0.0344 +0 +0.0002
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 -0.0218 +0.0070 +0 -0.0000
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 -0.3016 +0.0075 +0 +0.0013
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 0.0705 -0.0001 +0 +0.0005
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 0.0670 +0.0118 +0 +0.0009
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 -0.1995 +0.0003 +0 -0.0002
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 0.1996 +0.0273 +0 +0.0033
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2182 -0.0039 +0 +0.0050
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0738 +0.0080 +0 -0.0005
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.3069 +0.0484 +0 +0.0027
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0879 +0.0037 +0 +0.0002
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0513 +0.0006 +0 +0.0005
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2046 +0.0038 +0 +0.0020
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0432 -0.0047 +0 +0.0046
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1119 +0.0068 +0 -0.0044
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0827 +0.0509 +0 -0.0217
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 -0.0697 +0.0198 +0 +0.0084
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0513 -0.0072 +0 +0.0055
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 0.0146 +0.0003 +0 -0.0006
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 -0.0446 +0.0132 +0 -0.0004
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0585 -0.0239 +0 +0.0006
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0147 -0.0349 +0 +0.0007
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 -0.0229 +0.0141 +0 -0.0004
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0727 -0.0420 +0 -0.0004
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0503 -0.0520 +0 +0.0003

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2946 +0.0367 +0 -0.0041
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2148 +0.0142 +0 +0.0022
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2700 +0.0148 +0 -0.0006
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.3024 +0.0404 +0 -0.0061
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2230 +0.0168 +0 -0.0001
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2736 +0.0186 +0 -0.0005
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 0.7463 +0.0550 +0 +0.1475
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 0.4560 +0.0384 +0 +0.0610
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 1.8873 +0.1923 +0 +0.5268
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 0.2543 +0.0439 +0 +0.0004
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 0.3280 +0.0486 +0 -0.0136
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 0.3561 +0.0538 +0 -0.0024
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 0.3451 +0.0371 +0 +0.0143
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 0.2833 +0.0296 +0 -0.0017
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 0.5915 +0.0788 +0 +0.0352
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.6032 +0.0339 +0 -0.0090
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1388 -0.0061 +0 -0.0179
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.8219 +0.0041 +0 +0.0134
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3340 +0.0015 +0 -0.0048
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1768 +0.0655 +0 +0.0018
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3297 +0.0280 +0 -0.0008
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.5810 -0.0228 +0 -0.0151
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2286 +0.0964 +0 -0.0175
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.1351 +0.0666 +0 -0.0175
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 0.5413 +0.0340 +0 +0.0065
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 0.5845 +0.0136 +0 -0.0147
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 0.1529 -0.0003 +0 +0.0066
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 0.2145 +0.0190 +0 +0.0013
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 0.2454 +0.0284 +0 -0.0000
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 0.2019 +0.0280 +0 +0.0034
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 0.2408 +0.0124 +0 -0.0057
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 0.6244 +0.0431 +0 +0.0095
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 0.5559 +0.0632 +0 +0.0046

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1622 +0.0230 +0 +0.0097
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0761 +0.0026 +0 +0.0004
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1113 -0.0177 +0 -0.0010
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1220 -0.0076 +0 -0.0024
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0722 +0.0026 +0 +0.0017
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1255 +0.0033 +0 -0.0039
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 0.2116 +0.0399 +0 -0.0207
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 0.1220 +0.0252 +0 -0.0121
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 0.4805 +0.0889 +0 +0.0512
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 0.0432 +0.0025 +0 -0.0013
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 0.0620 +0.0100 +0 -0.0029
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 0.0595 +0.0069 +0 -0.0002
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 0.0512 -0.0030 +0 -0.0021
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 0.0499 +0.0023 +0 -0.0007
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 0.1161 +0.0328 +0 -0.0126
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2540 +0.0457 +0 +0.0050
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0517 -0.0061 +0 -0.0059
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.4513 -0.0364 +0 +0.0293
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0595 -0.0059 +0 +0.0008
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0329 +0.0045 +0 -0.0016
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0708 -0.0018 +0 -0.0033
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.2202 -0.0276 +0 +0.0142
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0821 +0.0043 +0 +0.0062
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.3310 -0.1098 +0 -0.0902
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 0.3162 +0.1039 +0 -0.0067
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 0.3415 +0.0434 +0 +0.0333
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 0.0712 +0.0076 +0 +0.0062
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 0.0623 -0.0052 +0 +0.0018
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 0.0676 -0.0076 +0 +0.0021
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 0.0623 +0.0059 +0 +0.0008
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 0.0899 -0.0129 +0 -0.0069
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 0.3159 +0.0229 +0 -0.0008
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 0.2913 +0.0416 +0 -0.0034

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600 164.9800 -82.2500 -79.2900 -82.1800 -33.2686% -32.4600% -33.2497%
KEAP1KO_Eclipse 24.0700 22.8000 19.6500
MTAC_3P_Alternating 12.7500 13.6800 8.5700
MTAC_3P_Standard 12.3100 13.0600 10.2700
MTAC_Yeast_Alternating_3min 5.4900 4.0600
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400
YEAST_KO_Astral 235.6300 216.9300 213.3300 142.0300 -93.6000 -74.9000 -71.3000 -39.7233% -34.5273% -33.4224%
EWZ_2P_MBR_Exploris 29 29.1900 24.7500
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Astral_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCIEX_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

YEAST_KO_Astral_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png