Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1227198 +130704 -84213 -84213 +11.9202% -6.4216% -6.4216%
MTAC_3P_Alternating 586322 616475 616475 604902 +18580 -11573 -11573 +3.1689% -1.8773% -1.8773%
MTAC_3P_Standard 596590 623500 623500 611761 +15171 -11739 -11739 +2.5430% -1.8828% -1.8828%
MTAC_Yeast_Alternating_3min 137143 137143 137733 +590 +590 +0.4302% +0.4302%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156819 +1178 +86 +257 +0.7569% +0.0549% +0.1642%
MTAC_Yeast_Standard_3min 138509 139777 139662 139506 +997 -271 -156 +0.7198% -0.1939% -0.1117%
MTAC_Yeast_Standard_5min 158962 158983 158983 159342 +380 +359 +359 +0.2391% +0.2258% +0.2258%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1174121 +151385 +18588 +18588 +14.8020% +1.6086% +1.6086%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 42323 +1441 +468 +468 +3.5248% +1.1181% +1.1181%
SCP_Astral_1000pg_24ms 41069 42339 42344 42430 +1361 +91 +86 +3.3139% +0.2149% +0.2031%
SCP_Astral_1000pg_3ms 8740 23115 23115 23023 +14283 -92 -92 +163.4211% -0.3980% -0.3980%
SCP_Astral_1000pg_6ms 16935 17553 17553 18529 +1594 +976 +976 +9.4125% +5.5603% +5.5603%
SCP_Astral_10ng_12ms 99908 102934 102934 103414 +3506 +480 +480 +3.5092% +0.4663% +0.4663%
SCP_Astral_10ng_24ms 71098 72525 72805 71830 +732 -695 -975 +1.0296% -0.9583% -1.3392%
SCP_Astral_10ng_6ms 115157 117282 117413 118396 +3239 +1114 +983 +2.8127% +0.9498% +0.8372%
SCP_Astral_10ng_ms 105704 106497 106497 106030 +326 -467 -467 +0.3084% -0.4385% -0.4385%
SCP_Astral_250pg_12ms 10194 10806 10806 11192 +998 +386 +386 +9.7901% +3.5721% +3.5721%
SCP_Astral_250pg_24ms 14807 15433 15433 15788 +981 +355 +355 +6.6252% +2.3003% +2.3003%
SCP_Astral_250pg_3ms 1261 2032 2032 2528 +1267 +496 +496 +100.4758% +24.4094% +24.4094%
SCP_Astral_250pg_6ms 1436 4783 4783 5754 +4318 +971 +971 +300.6964% +20.3011% +20.3011%
SCP_Astral_500pg_12ms 21710 21895 21895 22297 +587 +402 +402 +2.7038% +1.8360% +1.8360%
SCP_Astral_500pg_24ms 25860 26143 26143 26395 +535 +252 +252 +2.0688% +0.9639% +0.9639%
SCP_Astral_500pg_3ms 3484 6845 +3361 +96.4696%
SCP_Astral_500pg_6ms 10699 11474 11474 12860 +2161 +1386 +1386 +20.1981% +12.0795% +12.0795%
SCP_Astral_MBR 92167 93648 93648 93987 +1820 +339 +339 +1.9747% +0.3620% +0.3620%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 56254 -268 -268 -0.4742% -0.4742%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1760256 +97262 -44992 -44992 +5.8486% -2.4923% -2.4923%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1681851 +72945 -88908 -88908 +4.5338% -5.0209% -5.0209%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 137506 +26002 +3858 +3858 +23.3193% +2.8867% +2.8867%
MTAC_3P_Alternating 108267 117420 117420 119021 +10754 +1601 +1601 +9.9329% +1.3635% +1.3635%
MTAC_3P_Standard 110265 118733 118733 120162 +9897 +1429 +1429 +8.9756% +1.2035% +1.2035%
MTAC_Yeast_Alternating_3min 48709 48709 49573 +864 +864 +1.7738% +1.7738%
MTAC_Yeast_Alternating_5min 53969 55370 55197 56096 +2127 +726 +899 +3.9412% +1.3112% +1.6287%
MTAC_Yeast_Standard_3min 48621 50039 49836 50691 +2070 +652 +855 +4.2574% +1.3030% +1.7156%
MTAC_Yeast_Standard_5min 55060 56122 56122 57027 +1967 +905 +905 +3.5725% +1.6126% +1.6126%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 62607 +11335 +3705 +3705 +22.1076% +6.2901% +6.2901%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 15324 +884 +308 +308 +6.1219% +2.0511% +2.0511%
SCP_Astral_1000pg_24ms 14483 15025 15026 15142 +659 +117 +116 +4.5502% +0.7787% +0.7720%
SCP_Astral_1000pg_3ms 8740 9376 9376 9341 +601 -35 -35 +6.8764% -0.3733% -0.3733%
SCP_Astral_1000pg_6ms 8898 9259 9259 9845 +947 +586 +586 +10.6428% +6.3290% +6.3290%
SCP_Astral_10ng_12ms 34865 36293 36293 36446 +1581 +153 +153 +4.5346% +0.4216% +0.4216%
SCP_Astral_10ng_24ms 24649 25391 25531 25349 +700 -42 -182 +2.8399% -0.1654% -0.7129%
SCP_Astral_10ng_6ms 40156 41556 41511 42140 +1984 +584 +629 +4.9407% +1.4053% +1.5153%
SCP_Astral_10ng_ms 36688 37676 37676 37900 +1212 +224 +224 +3.3035% +0.5945% +0.5945%
SCP_Astral_250pg_12ms 3666 3949 3949 4203 +537 +254 +254 +14.6481% +6.4320% +6.4320%
SCP_Astral_250pg_24ms 5299 5611 5611 5758 +459 +147 +147 +8.6620% +2.6199% +2.6199%
SCP_Astral_250pg_3ms 675 721 721 935 +260 +214 +214 +38.5185% +29.6810% +29.6810%
SCP_Astral_250pg_6ms 1436 1738 1738 2194 +758 +456 +456 +52.7855% +26.2371% +26.2371%
SCP_Astral_500pg_12ms 7794 7972 7972 8106 +312 +134 +134 +4.0031% +1.6809% +1.6809%
SCP_Astral_500pg_24ms 9158 9342 9342 9555 +397 +213 +213 +4.3350% +2.2800% +2.2800%
SCP_Astral_500pg_3ms 1846 2582 +736 +39.8700%
SCP_Astral_500pg_6ms 3874 4155 4155 4733 +859 +578 +578 +22.1735% +13.9110% +13.9110%
SCP_Astral_MBR 24110 25035 25035 25432 +1322 +397 +397 +5.4832% +1.5858% +1.5858%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 56254 -268 -268 -0.4742% -0.4742%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 56973 +6273 +852 +852 +12.3728% +1.5181% +1.5181%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56235 +5644 -86 -86 +11.1561% -0.1527% -0.1527%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 89260 +1340 -3554 -3554 +1.5241% -3.8292% -3.8292%
MTAC_3P_Alternating 63773 64043 64043 63196 -577 -847 -847 -0.9048% -1.3225% -1.3225%
MTAC_3P_Standard 64317 64591 64591 63439 -878 -1152 -1152 -1.3651% -1.7835% -1.7835%
MTAC_Yeast_Alternating_3min 12100 12100 12030 -70 -70 -0.5785% -0.5785%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12522 +90 +111 +109 +0.7239% +0.8944% +0.8781%
MTAC_Yeast_Standard_3min 12008 12020 12034 11997 -11 -23 -37 -0.0916% -0.1913% -0.3075%
MTAC_Yeast_Standard_5min 12561 12508 12508 12507 -54 -1 -1 -0.4299% -0.0080% -0.0080%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 152790 +6566 -1012 -1012 +4.4904% -0.6580% -0.6580%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 9387 +224 -151 -151 +2.4446% -1.5831% -1.5831%
SCP_Astral_1000pg_24ms 9298 9857 9852 9782 +484 -75 -70 +5.2054% -0.7609% -0.7105%
SCP_Astral_1000pg_3ms 2450 6084 6084 6093 +3643 +9 +9 +148.6939% +0.1479% +0.1479%
SCP_Astral_1000pg_6ms 4703 4588 4588 4930 +227 +342 +342 +4.8267% +7.4542% +7.4542%
SCP_Astral_10ng_12ms 16190 16202 16202 16333 +143 +131 +131 +0.8833% +0.8085% +0.8085%
SCP_Astral_10ng_24ms 13599 13792 13697 13557 -42 -235 -140 -0.3088% -1.7039% -1.0221%
SCP_Astral_10ng_6ms 17017 17179 17127 17145 +128 -34 +18 +0.7522% -0.1979% +0.1051%
SCP_Astral_10ng_ms 16252 16276 16276 16047 -205 -229 -229 -1.2614% -1.4070% -1.4070%
SCP_Astral_250pg_12ms 3647 3913 3913 3368 -279 -545 -545 -7.6501% -13.9279% -13.9279%
SCP_Astral_250pg_24ms 4300 4603 4603 4570 +270 -33 -33 +6.2791% -0.7169% -0.7169%
SCP_Astral_250pg_3ms 576 22 22 1013 +437 +991 +991 +75.8681% +4504.5455% +4504.5455%
SCP_Astral_250pg_6ms 637 2080 2080 2114 +1477 +34 +34 +231.8681% +1.6346% +1.6346%
SCP_Astral_500pg_12ms 6245 6346 6346 5977 -268 -369 -369 -4.2914% -5.8147% -5.8147%
SCP_Astral_500pg_24ms 6722 6729 6729 6931 +209 +202 +202 +3.1092% +3.0019% +3.0019%
SCP_Astral_500pg_3ms 982 2318 +1336 +136.0489%
SCP_Astral_500pg_6ms 3708 4007 4007 4069 +361 +62 +62 +9.7357% +1.5473% +1.5473%
SCP_Astral_MBR 20165 20214 20214 19960 -205 -254 -254 -1.0166% -1.2566% -1.2566%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4705 +43 +43 +0.9224% +0.9224%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 245037 +5553 -767 -767 +2.3187% -0.3120% -0.3120%
EWZ_2P_noMBR_Exploris 235990 245406 245406 240265 +4275 -5141 -5141 +1.8115% -2.0949% -2.0949%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8193 +348 +19 +19 +4.4359% +0.2324% +0.2324%
MTAC_3P_Alternating 11361 11494 11494 11471 +110 -23 -23 +0.9682% -0.2001% -0.2001%
MTAC_3P_Standard 11473 11609 11609 11475 +2 -134 -134 +0.0174% -1.1543% -1.1543%
MTAC_Yeast_Alternating_3min 4135 4135 4129 -6 -6 -0.1451% -0.1451%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4274 +59 +45 +42 +1.3998% +1.0641% +0.9924%
MTAC_Yeast_Standard_3min 4075 4100 4113 4114 +39 +14 +1 +0.9571% +0.3415% +0.0243%
MTAC_Yeast_Standard_5min 4249 4249 4249 4260 +11 +11 +11 +0.2589% +0.2589% +0.2589%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 7690 +435 +67 +67 +5.9959% +0.8789% +0.8789%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 3374 +129 -23 -23 +3.9753% -0.6771% -0.6771%
SCP_Astral_1000pg_24ms 3254 3466 3469 3438 +184 -28 -31 +5.6546% -0.8078% -0.8936%
SCP_Astral_1000pg_3ms 2450 2396 2396 2384 -66 -12 -12 -2.6939% -0.5008% -0.5008%
SCP_Astral_1000pg_6ms 2508 2436 2436 2616 +108 +180 +180 +4.3062% +7.3892% +7.3892%
SCP_Astral_10ng_12ms 5579 5627 5627 5685 +106 +58 +58 +1.9000% +1.0307% +1.0307%
SCP_Astral_10ng_24ms 4721 4803 4754 4714 -7 -89 -40 -0.1483% -1.8530% -0.8414%
SCP_Astral_10ng_6ms 5846 5950 5930 5931 +85 -19 +1 +1.4540% -0.3193% +0.0169%
SCP_Astral_10ng_ms 5611 5655 5655 5590 -21 -65 -65 -0.3743% -1.1494% -1.1494%
SCP_Astral_250pg_12ms 1292 1424 1424 1225 -67 -199 -199 -5.1858% -13.9747% -13.9747%
SCP_Astral_250pg_24ms 1568 1660 1660 1669 +101 +9 +9 +6.4413% +0.5422% +0.5422%
SCP_Astral_250pg_3ms 307 8 8 379 +72 +371 +371 +23.4528% +4637.5000% +4637.5000%
SCP_Astral_250pg_6ms 637 756 756 781 +144 +25 +25 +22.6060% +3.3069% +3.3069%
SCP_Astral_500pg_12ms 2207 2275 2275 2179 -28 -96 -96 -1.2687% -4.2198% -4.2198%
SCP_Astral_500pg_24ms 2403 2388 2388 2494 +91 +106 +106 +3.7869% +4.4389% +4.4389%
SCP_Astral_500pg_3ms 525 876 +351 +66.8571%
SCP_Astral_500pg_6ms 1318 1447 1447 1479 +161 +32 +32 +12.2155% +2.2115% +2.2115%
SCP_Astral_MBR 4708 4754 4754 4750 +42 -4 -4 +0.8921% -0.0841% -0.0841%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4705 +43 +43 +0.9224% +0.9224%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 7124 +293 +86 +86 +4.2893% +1.2219% +1.2219%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7087 +229 -28 -28 +3.3392% -0.3935% -0.3935%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0011 -0.0005 -0.0008 -0.0008
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0000 +0.0004 +0.0001 +0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0000 +0.0014 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0021 -0.0002 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0011 -0.0007 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0013 +0.0006 +0.0000 +0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0016 -0.0006 +0.0003
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 -0.0001 +0.0001 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0029 -0.0006 -0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0029 +0.0025 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0056 -0.0027 -0.0020 -0.0020
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0024 -0.0022 -0.0013 -0.0013
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0019 +0.0003 +0.0004 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0010 +0.0010 -0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0025 -0.0000 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0008 -0.0001 -0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0047 -0.0009 -0.0007
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0039 -0.0037 -0.0027
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0045 +0.0006
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0026 -0.0004 -0.0006 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0029 -0.0017 +0.0002
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0027 -0.0014
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0015 +0.0016 +0.0016
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0010 +0.0016 +0.0007
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0022 -0.0013 +0.0009 +0.0009
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0012 -0.0002 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0034 -0.0022 -0.0012 -0.0012
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0058 -0.0008 -0.0008
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0029 +0.0012 +0.0010 +0.0010
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0050 +0.0009 +0.0000 +0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0029 +0.0007 +0.0017
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0033 -0.0004 -0.0035
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0071 -0.0022 -0.0025
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0070 -0.0000 -0.0012
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0056 +0.0004 -0.0020 -0.0020
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0037 -0.0020 +0.0012 +0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0040 +0.0014 +0.0009 +0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0030 +0.0003 -0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0048 -0.0011 +0.0025
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0029 +0.0026 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0082 -0.0029 -0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0025 +0.0016 +0.0017
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0087 +0.0012 -0.0020 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0028 +0.0008 +0.0026 +0.0026
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0032 -0.0012 -0.0024
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0036 +0.0006 -0.0106
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0041 +0.0004 +0.0004 +0.0004
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0039 +0.0020 -0.0020
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0008 -0.0003 -0.0004 -0.0004
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0001 +0.0003 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 -0.0001 +0.0007 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0014 -0.0002 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0006 -0.0002 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0007 +0.0001 +0.0000 +0.0000
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0009 -0.0001 +0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0002 +0.0006 -0.0003
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0024 -0.0009 -0.0011
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0026 +0.0020 +0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0036 -0.0016 -0.0014 -0.0014
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0022 -0.0024 -0.0017 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0011 +0.0006 +0.0001 +0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0007 +0.0006 -0.0011
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0018 +0.0001 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0001 +0.0004 -0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0036 -0.0006 -0.0009
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0025 -0.0017 -0.0016
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0020 +0.0017
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0018 +0.0000 -0.0006 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0019 -0.0003 +0.0001
SCP_Astral_500pg_3ms_Entrapment 0.0019 -0.0005 -0.0023
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0004 +0.0021 +0.0021
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0005 +0.0013 +0.0010
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0006 -0.0005 -0.0007 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0020 -0.0012 -0.0008 -0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0032 -0.0002 -0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0016 +0.0021 +0.0005 +0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0033 +0.0005 -0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0017 +0.0006 +0.0010
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0011 +0.0015 -0.0016
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0047 -0.0010 -0.0015
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0054 -0.0006 +0.0001
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0032 +0.0012 -0.0016 -0.0016
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0031 -0.0006 +0.0004 +0.0004
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0032 +0.0015 -0.0000 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0016 +0.0016 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0031 -0.0010 +0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0027 +0.0012 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0045 -0.0006 -0.0004
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0019 -0.0005 +0.0013
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0055 +0.0005 +0.0026 +0.0026
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0033 +0.0067 +0.0036 +0.0036
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0002 +0.0038 +0.0039 +0.0039
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0017 +0.0003 -0.0016
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0005 +0.0027 -0.0071
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0035 -0.0015 -0.0013 -0.0013
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0020 +0.0004 -0.0005
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0081 -0.0050 +0.0014 +0.0014

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.0435 -0.0041 -0.3651 -0.3651

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 10 +4 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 11 +4 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 12 +3 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1381 -0.0078 -0.0042 -0.0042
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1321 -0.0072 -0.0042 -0.0042
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1432 -0.0024 -0.0024
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1388 -0.0143 -0.0015 -0.0016
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1613 -0.0085 -0.0031 -0.0028
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1344 -0.0159 -0.0025 -0.0025
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1492 +0.0012 -0.0007 -0.0007
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0722 -0.0041 -0.0016 -0.0016
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0684 -0.0039 -0.0020 -0.0020
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0669 -0.0001 -0.0001
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0599 -0.0178 +0.0004 +0.0001
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0749 -0.0043 -0.0023 -0.0022
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0575 -0.0195 +0.0009 +0.0009
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1010 -0.0018 -0.0010 -0.0010
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0801 -0.0024 +0 +0.0111
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0379 -0.0079 +0 +0.0026
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0082 +0.0017 +0 +0.0039
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1307 +0.0015 +0 +0.0047
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0724 -0.0055 +0 -0.0006
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0172 -0.0083 +0 -0.0082
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2015 -0.0038 +0 -0.0219
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0753 +0.0068 +0 -0.0002
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2560 +0.0186 +0 -0.0181
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1031 +0.0049 +0 +0.0027
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0526 +0.0004 +0 -0.0013
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2064 +0.0054 +0 +0.0011
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0632 -0.0014 +0 +0.0168
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1088 +0.0042 +0 -0.0030
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0503 +0.0227 +0 -0.0404
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0710 +0.0011 +0 +0.0046
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0387 -0.0083 +0 +0.0019
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0120 +0.0048 +0 +0.0055
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1289 +0.0000 +0 +0.0044
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0693 -0.0064 +0 -0.0015
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0174 -0.0075 +0 -0.0074
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.1964 -0.0039 +0 -0.0169
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0732 +0.0080 +0 -0.0011
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.2765 +0.0484 +0 -0.0277
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0895 +0.0037 +0 +0.0018
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0494 +0.0006 +0 -0.0014
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2018 +0.0038 +0 -0.0008
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0632 -0.0047 +0 +0.0246
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1037 +0.0068 +0 -0.0125
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0642 +0.0509 +0 -0.0401
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2726 +0.0367 +0 -0.0261
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2151 +0.0142 +0 +0.0025
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2521 +0.0148 +0 -0.0186
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2673 +0.0404 +0 -0.0413
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2138 +0.0168 +0 -0.0092
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2562 +0.0186 +0 -0.0178
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.4798 +0.0339 +0 -0.1325
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1351 -0.0061 +0 -0.0216
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.6246 +0.0041 +0 -0.1838
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3153 +0.0015 +0 -0.0234
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1608 +0.0655 +0 -0.0142
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3132 +0.0280 +0 -0.0172
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.5526 -0.0228 +0 -0.0435
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2203 +0.0964 +0 -0.0259
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.0638 +0.0666 +0 -0.0887
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1292 +0.0230 +0 -0.0233
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0686 +0.0026 +0 -0.0071
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1290 -0.0177 +0 +0.0167
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1049 -0.0076 +0 -0.0195
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0609 +0.0026 +0 -0.0097
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1160 +0.0033 +0 -0.0134
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.1960 +0.0457 +0 -0.0529
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0451 -0.0061 +0 -0.0125
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.4087 -0.0364 +0 -0.0133
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0561 -0.0059 +0 -0.0026
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0331 +0.0045 +0 -0.0014
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0774 -0.0018 +0 +0.0034
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.2403 -0.0276 +0 +0.0343
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0636 +0.0043 +0 -0.0122
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.4333 -0.1098 +0 +0.0121
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 24.1700 +0.1000 +1.3700 +4.5200 +0.4155% +6.0088% +23.0025%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 11.3000 -1.4500 -2.3800 +2.7300 -11.3725% -17.3977% +31.8553%
MTAC_3P_Standard 12.3100 13.0600 10.2700 11.4500 -0.8600 -1.6100 +1.1800 -6.9862% -12.3277% +11.4898%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 4.0800 -1.4100 +0.0200 -25.6831% +0.4926%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.2000 -1.1800 -0.5200 +0.0500 -21.9331% -11.0169% +1.2048%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 4.1200 -1.3100 -1.5300 +0.1000 -24.1252% -27.0796% +2.4876%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.7000 -0.8500 +0.4000 +0.4100 -15.3153% +9.3023% +9.5571%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 30.8400 +3.1800 +7.1200 +10.5200 +11.4967% +30.0169% +51.7717%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000 4.0700 -1.7200 -1.8300 -29.7064% -31.0169%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400 4.3200 -1.9400 -0.8800 -0.1200 -30.9904% -16.9231% -2.7027%
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7500 -0.7700 -2.3600 -0.0100 -17.0354% -38.6252% -0.2660%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 4.5500 -1.1900 +1.0200 +1.0200 -20.7317% +28.8952% +28.8952%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.6000 -1.4700 -0.0300 +0.1600 -20.7921% -0.5329% +2.9412%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200 5.3600 -2.2300 -3.0000 -0.5600 -29.3808% -35.8852% -9.4595%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 5.1400 -2.2400 +0.2500 +0.3500 -30.3523% +5.1125% +7.3069%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.3100 -2.1400 -0.8800 -0.3500 -33.1783% -16.9557% -7.5107%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4700 -1.1800 -0.3600 +0.0100 -25.3763% -9.3995% +0.2890%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3300 -0.8400 -0.0600 +0.0600 -20.1439% -1.7699% +1.8349%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300 3.4500 -1.2800 -27.0613%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.5100 -1.1400 +0.0800 +0 -24.5161% +2.3324% +0%
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 5.1800 +0.8700 -0.5600 +20.1856% -9.7561%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 39.3700 +10.3700 +10.1800 +14.6200 +35.7586% +34.8750% +59.0707%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 36.8200 +9.7100 +8.5100 +14.7500 +35.8170% +30.0600% +66.8328%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png