Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1204754 +108260 -106657 -106657 +9.8733% -8.1330% -8.1330%
MTAC_3P_Alternating 586322 616475 616475 601557 +15235 -14918 -14918 +2.5984% -2.4199% -2.4199%
MTAC_3P_Standard 596590 623500 623500 607557 +10967 -15943 -15943 +1.8383% -2.5570% -2.5570%
MTAC_Yeast_Alternating_3min 137143 137143 137139 -4 -4 -0.0029% -0.0029%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156618 +977 -115 +56 +0.6277% -0.0734% +0.0358%
MTAC_Yeast_Standard_3min 138509 139777 139662 139662 +1153 -115 +0 +0.8324% -0.0823% +0%
MTAC_Yeast_Standard_5min 158962 158983 158983 159480 +518 +497 +497 +0.3259% +0.3126% +0.3126%
Olsen_Astral_3P 3282083 3760070 3760070 3533662 +251579 -226408 -226408 +7.6652% -6.0214% -6.0214%
Olsen_Exploris_3P 1022736 1155533 1155533 1165289 +142553 +9756 +9756 +13.9384% +0.8443% +0.8443%
SCIEX_3P 672242 749418 749418 757388 +85146 +7970 +7970 +12.6660% +1.0635% +1.0635%
SCP_Astral_1000pg_12ms 40882 41855 41855 43276 +2394 +1421 +1421 +5.8559% +3.3951% +3.3951%
SCP_Astral_1000pg_24ms 41069 42339 42344 42366 +1297 +27 +22 +3.1581% +0.0638% +0.0520%
SCP_Astral_1000pg_3ms 8740 23115 23115 23072 +14332 -43 -43 +163.9817% -0.1860% -0.1860%
SCP_Astral_1000pg_6ms 16935 17553 17553 18569 +1634 +1016 +1016 +9.6487% +5.7882% +5.7882%
SCP_Astral_10ng_12ms 99908 102934 102934 104178 +4270 +1244 +1244 +4.2739% +1.2085% +1.2085%
SCP_Astral_10ng_24ms 71098 72525 72805 72904 +1806 +379 +99 +2.5402% +0.5226% +0.1360%
SCP_Astral_10ng_6ms 115157 117282 117413 117614 +2457 +332 +201 +2.1336% +0.2831% +0.1712%
SCP_Astral_10ng_ms 105704 106497 106497 106052 +348 -445 -445 +0.3292% -0.4179% -0.4179%
SCP_Astral_250pg_12ms 10194 10806 10806 11258 +1064 +452 +452 +10.4375% +4.1829% +4.1829%
SCP_Astral_250pg_24ms 14807 15433 15433 16575 +1768 +1142 +1142 +11.9403% +7.3997% +7.3997%
SCP_Astral_250pg_3ms 1261 2032 2032 2528 +1267 +496 +496 +100.4758% +24.4094% +24.4094%
SCP_Astral_250pg_6ms 1436 4783 4783 5719 +4283 +936 +936 +298.2591% +19.5693% +19.5693%
SCP_Astral_500pg_12ms 21710 21895 21895 22309 +599 +414 +414 +2.7591% +1.8908% +1.8908%
SCP_Astral_500pg_24ms 25860 26143 26143 27155 +1295 +1012 +1012 +5.0077% +3.8710% +3.8710%
SCP_Astral_500pg_3ms 3484 6864 +3380 +97.0149%
SCP_Astral_500pg_6ms 10699 11474 11474 12864 +2165 +1390 +1390 +20.2355% +12.1143% +12.1143%
SCP_Astral_MBR 92167 93648 93648 94934 +2767 +1286 +1286 +3.0022% +1.3732% +1.3732%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 56699 +177 +177 +0.3132% +0.3132%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1756492 +93498 -48756 -48756 +5.6223% -2.7008% -2.7008%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1670340 +61434 -100419 -100419 +3.8184% -5.6710% -5.6710%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 136609 +25105 +2961 +2961 +22.5149% +2.2155% +2.2155%
MTAC_3P_Alternating 108267 117420 117420 118787 +10520 +1367 +1367 +9.7167% +1.1642% +1.1642%
MTAC_3P_Standard 110265 118733 118733 119641 +9376 +908 +908 +8.5032% +0.7647% +0.7647%
MTAC_Yeast_Alternating_3min 48709 48709 49460 +751 +751 +1.5418% +1.5418%
MTAC_Yeast_Alternating_5min 53969 55370 55197 56029 +2060 +659 +832 +3.8170% +1.1902% +1.5073%
MTAC_Yeast_Standard_3min 48621 50039 49836 50882 +2261 +843 +1046 +4.6503% +1.6847% +2.0989%
MTAC_Yeast_Standard_5min 55060 56122 56122 57173 +2113 +1051 +1051 +3.8376% +1.8727% +1.8727%
Olsen_Astral_3P 198770 231187 231187 240446 +41676 +9259 +9259 +20.9669% +4.0050% +4.0050%
Olsen_Exploris_3P 51272 58902 58902 63338 +12066 +4436 +4436 +23.5333% +7.5312% +7.5312%
SCIEX_3P 82206 93832 93832 100597 +18391 +6765 +6765 +22.3718% +7.2097% +7.2097%
SCP_Astral_1000pg_12ms 14440 15016 15016 15687 +1247 +671 +671 +8.6357% +4.4686% +4.4686%
SCP_Astral_1000pg_24ms 14483 15025 15026 15315 +832 +290 +289 +5.7447% +1.9301% +1.9233%
SCP_Astral_1000pg_3ms 8740 9376 9376 9398 +658 +22 +22 +7.5286% +0.2346% +0.2346%
SCP_Astral_1000pg_6ms 8898 9259 9259 9860 +962 +601 +601 +10.8114% +6.4910% +6.4910%
SCP_Astral_10ng_12ms 34865 36293 36293 37056 +2191 +763 +763 +6.2842% +2.1023% +2.1023%
SCP_Astral_10ng_24ms 24649 25391 25531 25828 +1179 +437 +297 +4.7832% +1.7211% +1.1633%
SCP_Astral_10ng_6ms 40156 41556 41511 42049 +1893 +493 +538 +4.7141% +1.1864% +1.2960%
SCP_Astral_10ng_ms 36688 37676 37676 37907 +1219 +231 +231 +3.3226% +0.6131% +0.6131%
SCP_Astral_250pg_12ms 3666 3949 3949 4188 +522 +239 +239 +14.2390% +6.0522% +6.0522%
SCP_Astral_250pg_24ms 5299 5611 5611 6155 +856 +544 +544 +16.1540% +9.6952% +9.6952%
SCP_Astral_250pg_3ms 675 721 721 935 +260 +214 +214 +38.5185% +29.6810% +29.6810%
SCP_Astral_250pg_6ms 1436 1738 1738 2169 +733 +431 +431 +51.0446% +24.7986% +24.7986%
SCP_Astral_500pg_12ms 7794 7972 7972 8167 +373 +195 +195 +4.7857% +2.4461% +2.4461%
SCP_Astral_500pg_24ms 9158 9342 9342 9764 +606 +422 +422 +6.6172% +4.5172% +4.5172%
SCP_Astral_500pg_3ms 1846 2578 +732 +39.6533%
SCP_Astral_500pg_6ms 3874 4155 4155 4747 +873 +592 +592 +22.5348% +14.2479% +14.2479%
SCP_Astral_MBR 24110 25035 25035 26030 +1920 +995 +995 +7.9635% +3.9744% +3.9744%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 56699 +177 +177 +0.3132% +0.3132%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 56906 +6206 +785 +785 +12.2406% +1.3988% +1.3988%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56012 +5421 -309 -309 +10.7153% -0.5486% -0.5486%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 88373 +453 -4441 -4441 +0.5152% -4.7848% -4.7848%
MTAC_3P_Alternating 63773 64043 64043 62831 -942 -1212 -1212 -1.4771% -1.8925% -1.8925%
MTAC_3P_Standard 64317 64591 64591 63266 -1051 -1325 -1325 -1.6341% -2.0514% -2.0514%
MTAC_Yeast_Alternating_3min 12100 12100 12000 -100 -100 -0.8264% -0.8264%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12460 +28 +49 +47 +0.2252% +0.3948% +0.3786%
MTAC_Yeast_Standard_3min 12008 12020 12034 11994 -14 -26 -40 -0.1166% -0.2163% -0.3324%
MTAC_Yeast_Standard_5min 12561 12508 12508 12553 -8 +45 +45 -0.0637% +0.3598% +0.3598%
Olsen_Astral_3P 236395 245754 245754 232911 -3484 -12843 -12843 -1.4738% -5.2260% -5.2260%
Olsen_Exploris_3P 146224 153802 153802 150301 +4077 -3501 -3501 +2.7882% -2.2763% -2.2763%
SCIEX_3P 70810 74209 74209 71622 +812 -2587 -2587 +1.1467% -3.4861% -3.4861%
SCP_Astral_1000pg_12ms 9163 9538 9538 9366 +203 -172 -172 +2.2154% -1.8033% -1.8033%
SCP_Astral_1000pg_24ms 9298 9857 9852 9755 +457 -102 -97 +4.9150% -1.0348% -0.9846%
SCP_Astral_1000pg_3ms 2450 6084 6084 6206 +3756 +122 +122 +153.3061% +2.0053% +2.0053%
SCP_Astral_1000pg_6ms 4703 4588 4588 4963 +260 +375 +375 +5.5284% +8.1735% +8.1735%
SCP_Astral_10ng_12ms 16190 16202 16202 16202 +12 +0 +0 +0.0741% +0% +0%
SCP_Astral_10ng_24ms 13599 13792 13697 13581 -18 -211 -116 -0.1324% -1.5299% -0.8469%
SCP_Astral_10ng_6ms 17017 17179 17127 17041 +24 -138 -86 +0.1410% -0.8033% -0.5021%
SCP_Astral_10ng_ms 16252 16276 16276 16226 -26 -50 -50 -0.1600% -0.3072% -0.3072%
SCP_Astral_250pg_12ms 3647 3913 3913 3799 +152 -114 -114 +4.1678% -2.9134% -2.9134%
SCP_Astral_250pg_24ms 4300 4603 4603 4429 +129 -174 -174 +3% -3.7801% -3.7801%
SCP_Astral_250pg_3ms 576 22 22 1013 +437 +991 +991 +75.8681% +4504.5455% +4504.5455%
SCP_Astral_250pg_6ms 637 2080 2080 2055 +1418 -25 -25 +222.6060% -1.2019% -1.2019%
SCP_Astral_500pg_12ms 6245 6346 6346 6019 -226 -327 -327 -3.6189% -5.1529% -5.1529%
SCP_Astral_500pg_24ms 6722 6729 6729 7125 +403 +396 +396 +5.9952% +5.8850% +5.8850%
SCP_Astral_500pg_3ms 982 2379 +1397 +142.2607%
SCP_Astral_500pg_6ms 3708 4007 4007 4045 +337 +38 +38 +9.0885% +0.9483% +0.9483%
SCP_Astral_MBR 20165 20214 20214 20013 -152 -201 -201 -0.7538% -0.9944% -0.9944%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4685 +23 +23 +0.4934% +0.4934%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 243686 +4202 -2118 -2118 +1.7546% -0.8617% -0.8617%
EWZ_2P_noMBR_Exploris 235990 245406 245406 239295 +3305 -6111 -6111 +1.4005% -2.4902% -2.4902%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8125 +280 -49 -49 +3.5692% -0.5995% -0.5995%
MTAC_3P_Alternating 11361 11494 11494 11422 +61 -72 -72 +0.5369% -0.6264% -0.6264%
MTAC_3P_Standard 11473 11609 11609 11467 -6 -142 -142 -0.0523% -1.2232% -1.2232%
MTAC_Yeast_Alternating_3min 4135 4135 4104 -31 -31 -0.7497% -0.7497%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4247 +32 +18 +15 +0.7592% +0.4256% +0.3544%
MTAC_Yeast_Standard_3min 4075 4100 4113 4115 +40 +15 +2 +0.9816% +0.3659% +0.0486%
MTAC_Yeast_Standard_5min 4249 4249 4249 4275 +26 +26 +26 +0.6119% +0.6119% +0.6119%
Olsen_Astral_3P 13820 14399 14399 14058 +238 -341 -341 +1.7221% -2.3682% -2.3682%
Olsen_Exploris_3P 7255 7623 7623 7648 +393 +25 +25 +5.4170% +0.3280% +0.3280%
SCIEX_3P 8652 9081 9081 9051 +399 -30 -30 +4.6117% -0.3304% -0.3304%
SCP_Astral_1000pg_12ms 3245 3397 3397 3314 +69 -83 -83 +2.1263% -2.4433% -2.4433%
SCP_Astral_1000pg_24ms 3254 3466 3469 3465 +211 -1 -4 +6.4843% -0.0289% -0.1153%
SCP_Astral_1000pg_3ms 2450 2396 2396 2440 -10 +44 +44 -0.4082% +1.8364% +1.8364%
SCP_Astral_1000pg_6ms 2508 2436 2436 2639 +131 +203 +203 +5.2233% +8.3333% +8.3333%
SCP_Astral_10ng_12ms 5579 5627 5627 5623 +44 -4 -4 +0.7887% -0.0711% -0.0711%
SCP_Astral_10ng_24ms 4721 4803 4754 4738 +17 -65 -16 +0.3601% -1.3533% -0.3366%
SCP_Astral_10ng_6ms 5846 5950 5930 5916 +70 -34 -14 +1.1974% -0.5714% -0.2361%
SCP_Astral_10ng_ms 5611 5655 5655 5666 +55 +11 +11 +0.9802% +0.1945% +0.1945%
SCP_Astral_250pg_12ms 1292 1424 1424 1396 +104 -28 -28 +8.0495% -1.9663% -1.9663%
SCP_Astral_250pg_24ms 1568 1660 1660 1580 +12 -80 -80 +0.7653% -4.8193% -4.8193%
SCP_Astral_250pg_3ms 307 8 8 379 +72 +371 +371 +23.4528% +4637.5000% +4637.5000%
SCP_Astral_250pg_6ms 637 756 756 757 +120 +1 +1 +18.8383% +0.1323% +0.1323%
SCP_Astral_500pg_12ms 2207 2275 2275 2187 -20 -88 -88 -0.9062% -3.8681% -3.8681%
SCP_Astral_500pg_24ms 2403 2388 2388 2502 +99 +114 +114 +4.1199% +4.7739% +4.7739%
SCP_Astral_500pg_3ms 525 903 +378 +72%
SCP_Astral_500pg_6ms 1318 1447 1447 1486 +168 +39 +39 +12.7466% +2.6952% +2.6952%
SCP_Astral_MBR 4708 4754 4754 4769 +61 +15 +15 +1.2957% +0.3155% +0.3155%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4685 +23 +23 +0.4934% +0.4934%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 7080 +249 +42 +42 +3.6451% +0.5968% +0.5968%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7084 +226 -31 -31 +3.2954% -0.4357% -0.4357%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0012 -0.0006 -0.0009 -0.0009
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0007 -0.0002 -0.0006 -0.0006
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 -0.0001 +0.0013 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0033 -0.0014 -0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0016 -0.0012 -0.0003 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0017 +0.0002 -0.0004 -0.0004
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0023 -0.0013 -0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0011 -0.0016 -0.0001 -0.0005
Olsen_Exploris_3P_Entrapment -0.0002 0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001 0.0001 +0.0006 +0.0002
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0020 +0.0002 -0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0031 +0.0023 +0.0002
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0031 -0.0002 +0.0005 +0.0005
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0028 -0.0026 -0.0017 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0027 -0.0005 -0.0004 -0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0009 +0.0012 -0.0018
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0021 +0.0003 +0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0008 -0.0001 -0.0006
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0055 -0.0016 -0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0047 -0.0045 -0.0035
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0045 +0.0006
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0022 -0.0001 -0.0002 -0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0014 -0.0001 +0.0018
SCP_Astral_500pg_3ms_Entrapment -0.0013 -0.0015 -0.0002
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0022 +0.0009 +0.0009
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0026 +0.0000 -0.0009
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0005 +0.0005 +0.0026 +0.0026
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0041 -0.0031 -0.0035 -0.0035
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0038 -0.0025 -0.0015 -0.0015
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0068 -0.0018 -0.0018
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0043 -0.0002 -0.0005 -0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0042 +0.0016 +0.0008 +0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0021 +0.0015 +0.0024
Olsen_Astral_3P_Entrapment -0.0041 -0.0034 -0.0017 +0.0024 +0.0017
Olsen_Exploris_3P_Entrapment -0.0029 0.0002
SCIEX_3P_Entrapment -0.0031 -0.0032 -0.0026 +0.0006 +0.0007
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0058 -0.0009 -0.0012
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0026 +0.0044 +0.0032
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0054 +0.0005 -0.0018 -0.0018
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0067 -0.0049 -0.0017 -0.0017
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0050 +0.0005 -0.0000 -0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0028 +0.0005 -0.0005
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0046 -0.0009 +0.0027
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0042 +0.0013 -0.0018
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0054 -0.0000 +0.0023
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0014 +0.0028 +0.0028
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0087 +0.0012 -0.0020 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0069 -0.0033 -0.0015 -0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0027 -0.0007 -0.0018
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 0.0040 +0.0082 -0.0031
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0042 +0.0003 +0.0003 +0.0003
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0028 +0.0032 -0.0009
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0005 +0.0000 -0.0001 -0.0001
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 -0.0002 -0.0001 -0.0005 -0.0005
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 -0.0001 +0.0008 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0019 -0.0006 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0007 -0.0003 +0.0001 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0010 -0.0002 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0011 -0.0003 -0.0001
Olsen_Astral_3P_Entrapment -0.0008 -0.0004 -0.0009 -0.0001 -0.0005
Olsen_Exploris_3P_Entrapment -0.0004 0.0005
SCIEX_3P_Entrapment -0.0005 -0.0001 -0.0000 +0.0005 +0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0018 -0.0003 -0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0025 +0.0021 +0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0023 -0.0003 -0.0001 -0.0001
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0024 -0.0025 -0.0018 -0.0018
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0021 -0.0005 -0.0009 -0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0008 +0.0005 -0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0013 +0.0007 +0.0007
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0003 +0.0003 -0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0029 +0.0001 -0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0035 -0.0027 -0.0026
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0020 +0.0017
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0019 -0.0000 -0.0007 -0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0021 -0.0005 -0.0001
SCP_Astral_500pg_3ms_Entrapment 0.0019 0.0008 -0.0010
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0011 +0.0015 +0.0015
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0014 +0.0004 +0.0001
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0019 -0.0018 -0.0020 -0.0020
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0019 -0.0011 -0.0007 -0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0042 -0.0012 -0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0027 +0.0010 -0.0006 -0.0006
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0029 +0.0009 +0.0003 +0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0019 +0.0004 +0.0008
Olsen_Astral_3P_Entrapment -0.0024 -0.0024 -0.0016 +0.0008 +0.0007
Olsen_Exploris_3P_Entrapment -0.0026 0.0005
SCIEX_3P_Entrapment -0.0036 -0.0031 -0.0023 +0.0013 +0.0008
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0045 -0.0008 -0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0030 +0.0019 +0.0026
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0028 +0.0016 -0.0013 -0.0013
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0042 -0.0017 -0.0007 -0.0007
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0036 +0.0012 -0.0003 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0020 +0.0012 -0.0007
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0031 -0.0010 +0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0039 -0.0001 -0.0009
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0036 +0.0002 +0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 0.0001 +0.0015 +0.0033
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0055 +0.0005 +0.0026 +0.0026
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0033 +0.0067 +0.0036 +0.0036
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0046 -0.0007 -0.0006 -0.0006
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0016 +0.0003 -0.0015
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 0.0019 +0.0051 -0.0048
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0015 +0.0005 +0.0007 +0.0007
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0023 +0.0001 -0.0008
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0083 -0.0048 +0.0017 +0.0017

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.0277 -0.0199 -0.3809 -0.3809

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 10 +4 +0 -3
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 11 +4 +0 -2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 12 +3 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1358 -0.0101 -0.0065 -0.0065
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1306 -0.0087 -0.0057 -0.0057
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1420 -0.0036 -0.0036
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1383 -0.0147 -0.0019 -0.0020
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1611 -0.0086 -0.0032 -0.0030
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1349 -0.0154 -0.0020 -0.0020
Olsen_Astral_3P 0.0823 0.0884 0.0884 0.0790 -0.0032 -0.0094 -0.0094
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1472 -0.0008 -0.0027 -0.0027
SCIEX_3P 0.1284 0.1281 0.1281 0.1243 -0.0041 -0.0038 -0.0038

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0712 -0.0051 -0.0026 -0.0026
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0678 -0.0046 -0.0026 -0.0026
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0675 +0.0004 +0.0004
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0593 -0.0185 -0.0003 -0.0005
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0745 -0.0047 -0.0027 -0.0027
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0577 -0.0193 +0.0011 +0.0011
Olsen_Astral_3P 0.0374 0.0373 0.0373 0.0342 -0.0032 -0.0031 -0.0031
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.0997 -0.0032 -0.0023 -0.0023
SCIEX_3P 0.0864 0.0834 0.0834 0.0795 -0.0069 -0.0039 -0.0039

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0783 -0.0024 +0 +0.0093
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0350 -0.0079 +0 -0.0002
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0124 +0.0017 +0 +0.0081
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1321 +0.0015 +0 +0.0061
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0726 -0.0055 +0 -0.0004
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0161 -0.0083 +0 -0.0093
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 -0.0543 +0.0114 +0 -0.0141
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 -0.2162 +0.0117 +0 +0.0032
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 0.0445 -0.0069 +0 +0.0320
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 -0.0143 +0.0067 +0 +0.0039
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 -0.3276 +0.0083 +0 -0.0064
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 0.0747 -0.0025 +0 -0.0005
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 0.1080 +0.0108 +0 +0.0216
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 -0.2081 +0.0011 +0 -0.0193
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 0.2490 +0.0262 +0 +0.0288
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.1954 -0.0038 +0 -0.0280
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0805 +0.0068 +0 +0.0050
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2397 +0.0186 +0 -0.0344
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1050 +0.0049 +0 +0.0046
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0548 +0.0004 +0 +0.0008
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2044 +0.0054 +0 -0.0009
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0652 -0.0014 +0 +0.0188
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1105 +0.0042 +0 -0.0013
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0480 +0.0227 +0 -0.0426
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 -0.0705 +0.0187 +0 -0.0013
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0576 -0.0042 +0 +0.0037
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 0.0055 -0.0050 +0 -0.0041
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 -0.0453 +0.0117 +0 +0.0001
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0580 -0.0241 +0 +0.0016
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0160 -0.0332 +0 +0.0007
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 -0.0115 +0.0110 +0 -0.0079
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0589 -0.0352 +0 -0.0123
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0404 -0.0479 +0 -0.0029

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0666 +0.0011 +0 +0.0001
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0354 -0.0083 +0 -0.0015
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0163 +0.0048 +0 +0.0099
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1326 +0.0000 +0 +0.0081
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0688 -0.0064 +0 -0.0020
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0146 -0.0075 +0 -0.0102
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 -0.0460 +0.0198 +0 -0.0190
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 -0.1478 +0.0046 +0 -0.0182
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 0.0823 -0.0344 +0 +0.0567
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 -0.0228 +0.0070 +0 +0.0009
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 -0.2890 +0.0075 +0 -0.0113
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 0.0704 -0.0001 +0 +0.0004
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 0.0906 +0.0118 +0 +0.0246
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 -0.1715 +0.0003 +0 -0.0282
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 0.2246 +0.0273 +0 +0.0283
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.1815 -0.0039 +0 -0.0318
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0753 +0.0080 +0 +0.0010
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.2648 +0.0484 +0 -0.0394
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0883 +0.0037 +0 +0.0005
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0519 +0.0006 +0 +0.0011
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.1993 +0.0038 +0 -0.0034
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0547 -0.0047 +0 +0.0161
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1077 +0.0068 +0 -0.0085
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0798 +0.0509 +0 -0.0245
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 -0.0561 +0.0198 +0 -0.0053
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0450 -0.0072 +0 -0.0009
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 0.0086 +0.0003 +0 -0.0066
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 -0.0439 +0.0132 +0 -0.0011
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0595 -0.0239 +0 +0.0015
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0162 -0.0349 +0 +0.0022
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 -0.0116 +0.0141 +0 -0.0117
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0569 -0.0420 +0 -0.0162
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0396 -0.0520 +0 -0.0104

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2571 +0.0367 +0 -0.0416
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2074 +0.0142 +0 -0.0052
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2519 +0.0148 +0 -0.0187
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2692 +0.0404 +0 -0.0394
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2123 +0.0168 +0 -0.0107
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2533 +0.0186 +0 -0.0208
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 0.3965 +0.0550 +0 -0.2023
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 0.3010 +0.0384 +0 -0.0941
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 0.7924 +0.1923 +0 -0.5681
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 0.2259 +0.0439 +0 -0.0280
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 0.3033 +0.0486 +0 -0.0383
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 0.2942 +0.0538 +0 -0.0642
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 0.2518 +0.0371 +0 -0.0790
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 0.2558 +0.0296 +0 -0.0291
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 0.3617 +0.0788 +0 -0.1945
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.5115 +0.0339 +0 -0.1007
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1178 -0.0061 +0 -0.0389
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.7544 +0.0041 +0 -0.0540
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3174 +0.0015 +0 -0.0214
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1530 +0.0655 +0 -0.0221
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.2955 +0.0280 +0 -0.0349
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.5618 -0.0228 +0 -0.0343
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2103 +0.0964 +0 -0.0359
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.0334 +0.0666 +0 -0.1191
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 0.4305 +0.0340 +0 -0.1043
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 0.5374 +0.0136 +0 -0.0617
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 0.1576 -0.0003 +0 +0.0113
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 0.2194 +0.0190 +0 +0.0062
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 0.2259 +0.0284 +0 -0.0195
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 0.2106 +0.0280 +0 +0.0121
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 0.2182 +0.0124 +0 -0.0283
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 0.4756 +0.0431 +0 -0.1394
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 0.4061 +0.0632 +0 -0.1452

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1179 +0.0230 +0 -0.0346
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0676 +0.0026 +0 -0.0081
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1151 -0.0177 +0 +0.0028
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1159 -0.0076 +0 -0.0085
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0590 +0.0026 +0 -0.0116
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1193 +0.0033 +0 -0.0101
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 0.1151 +0.0399 +0 -0.1172
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 0.0776 +0.0252 +0 -0.0566
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 0.1702 +0.0889 +0 -0.2591
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 0.0320 +0.0025 +0 -0.0125
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 0.0502 +0.0100 +0 -0.0148
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 0.0407 +0.0069 +0 -0.0190
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 0.0386 -0.0030 +0 -0.0148
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 0.0550 +0.0023 +0 +0.0045
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 0.0815 +0.0328 +0 -0.0472
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.1981 +0.0457 +0 -0.0509
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0477 -0.0061 +0 -0.0098
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.4543 -0.0364 +0 +0.0323
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0634 -0.0059 +0 +0.0047
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0231 +0.0045 +0 -0.0115
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0615 -0.0018 +0 -0.0126
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.1996 -0.0276 +0 -0.0064
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0613 +0.0043 +0 -0.0145
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.2822 -0.1098 +0 -0.1390
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 0.1400 +0.1039 +0 -0.1829
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 0.1931 +0.0434 +0 -0.1151
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 0.0444 +0.0076 +0 -0.0206
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 0.0523 -0.0052 +0 -0.0082
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 0.0497 -0.0076 +0 -0.0158
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 0.0521 +0.0059 +0 -0.0094
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 0.0803 -0.0129 +0 -0.0166
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 0.1746 +0.0229 +0 -0.1421
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 0.1725 +0.0416 +0 -0.1223

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 36.9100 +12.8400 +14.1100 +17.2600 +53.3444% +61.8860% +87.8372%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 15.6700 +2.9200 +1.9900 +7.1000 +22.9020% +14.5468% +82.8471%
MTAC_3P_Standard 12.3100 13.0600 10.2700 16.8900 +4.5800 +3.8300 +6.6200 +37.2055% +29.3262% +64.4596%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 4.1200 -1.3700 +0.0600 -24.9545% +1.4778%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.2400 -1.1400 -0.4800 +0.0900 -21.1896% -10.1695% +2.1687%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 4.1700 -1.2600 -1.4800 +0.1500 -23.2044% -26.1947% +3.7313%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.2900 -1.2600 -0.0100 +0 -22.7027% -0.2326% +0%
Olsen_Astral_3P 76.4000 66.2000 62.2200 326.4200 +250.0200 +260.2200 +264.2000 +327.2513% +393.0816% +424.6223%
Olsen_Exploris_3P 27.6600 23.7200 20.3200 69.6600 +42 +45.9400 +49.3400 +151.8438% +193.6762% +242.8150%
SCIEX_3P 30.2900 33.2900 28.0700 45.1400 +14.8500 +11.8500 +17.0700 +49.0261% +35.5963% +60.8123%
SCP_Astral_1000pg_12ms 5.7900 5.9000 4.1800 -1.6100 -1.7200 -27.8066% -29.1525%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7400 -0.7800 -2.3700 -0.0200 -17.2566% -38.7889% -0.5319%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.5600 -2.1800 +0.0300 +0.0300 -37.9791% +0.8499% +0.8499%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.9200 -1.1500 +0.2900 +0.4800 -16.2659% +5.1510% +8.8235%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 5.3400 -2.0400 +0.4500 +0.5500 -27.6423% +9.2025% +11.4823%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.4900 -1.9600 -0.7000 -0.1700 -30.3876% -13.4875% -3.6481%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.4400 -1.3000 -0.0700 -0.0300 -27.4262% -1.9943% -0.8646%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100 3.7200 -1.5400 -0.4700 +0.1100 -29.2776% -11.2172% +3.0471%
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4600 -1.1900 -0.3700 +0 -25.5914% -9.6606% +0%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3200 -0.8500 -0.0700 +0.0500 -20.3837% -2.0649% +1.5291%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.6100 -1.6700 +0.1200 +0.0700 -31.6288% +3.4384% +1.9774%
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300 3.4700 -1.2600 -26.6385%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.4400 -1.2100 +0.0100 -0.0700 -26.0215% +0.2915% -1.9943%
SCP_Astral_MBR 9.0400 7.4500 -1.5900 -17.5885%
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 5.4300 +1.1200 -0.3100 +25.9861% -5.4007%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 56.4700 +27.4700 +27.2800 +31.7200 +94.7241% +93.4567% +128.1616%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 51.8300 +24.7200 +23.5200 +29.7600 +91.1841% +83.0802% +134.8437%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Astral_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCIEX_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png