Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1249544 +153050 -61867 -61867 +13.9581% -4.7176% -4.7176%
MTAC_3P_Alternating 586322 616475 616475 609761 +23439 -6714 -6714 +3.9976% -1.0891% -1.0891%
MTAC_3P_Standard 596590 623500 623500 617240 +20650 -6260 -6260 +3.4613% -1.0040% -1.0040%
MTAC_Yeast_Alternating_3min 137143 137143 137121 -22 -22 -0.0160% -0.0160%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156979 +1338 +246 +417 +0.8597% +0.1570% +0.2663%
MTAC_Yeast_Standard_3min 138509 139777 139662 139652 +1143 -125 -10 +0.8252% -0.0894% -0.0072%
MTAC_Yeast_Standard_5min 158962 158983 158983 159520 +558 +537 +537 +0.3510% +0.3378% +0.3378%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1171169 +148433 +15636 +15636 +14.5133% +1.3531% +1.3531%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 42296 +1414 +441 +441 +3.4587% +1.0536% +1.0536%
SCP_Astral_1000pg_24ms 41069 42339 42344 41711 +642 -628 -633 +1.5632% -1.4833% -1.4949%
SCP_Astral_1000pg_3ms 8740 23115 23115 23090 +14350 -25 -25 +164.1876% -0.1082% -0.1082%
SCP_Astral_1000pg_6ms 16935 17553 17553 18518 +1583 +965 +965 +9.3475% +5.4976% +5.4976%
SCP_Astral_10ng_12ms 99908 102934 102934 102770 +2862 -164 -164 +2.8646% -0.1593% -0.1593%
SCP_Astral_10ng_24ms 71098 72525 72805 71776 +678 -749 -1029 +0.9536% -1.0327% -1.4134%
SCP_Astral_10ng_6ms 115157 117282 117413 117514 +2357 +232 +101 +2.0468% +0.1978% +0.0860%
SCP_Astral_10ng_ms 105704 106497 106497 106296 +592 -201 -201 +0.5601% -0.1887% -0.1887%
SCP_Astral_250pg_12ms 10194 10806 10806 11056 +862 +250 +250 +8.4560% +2.3135% +2.3135%
SCP_Astral_250pg_24ms 14807 15433 15433 15516 +709 +83 +83 +4.7883% +0.5378% +0.5378%
SCP_Astral_250pg_3ms 1261 2032 2032 2462 +1201 +430 +430 +95.2419% +21.1614% +21.1614%
SCP_Astral_250pg_6ms 1436 4783 4783 5616 +4180 +833 +833 +291.0864% +17.4158% +17.4158%
SCP_Astral_500pg_12ms 21710 21895 21895 22384 +674 +489 +489 +3.1046% +2.2334% +2.2334%
SCP_Astral_500pg_24ms 25860 26143 26143 25452 -408 -691 -691 -1.5777% -2.6432% -2.6432%
SCP_Astral_500pg_3ms 3484 6921 +3437 +98.6510%
SCP_Astral_500pg_6ms 10699 11474 11474 12765 +2066 +1291 +1291 +19.3102% +11.2515% +11.2515%
SCP_Astral_MBR 92167 93648 93648 93066 +899 -582 -582 +0.9754% -0.6215% -0.6215%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 55846 -676 -676 -1.1960% -1.1960%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1766729 +103735 -38519 -38519 +6.2378% -2.1337% -2.1337%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1697453 +88547 -73306 -73306 +5.5036% -4.1398% -4.1398%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 137688 +26184 +4040 +4040 +23.4826% +3.0229% +3.0229%
MTAC_3P_Alternating 108267 117420 117420 119120 +10853 +1700 +1700 +10.0243% +1.4478% +1.4478%
MTAC_3P_Standard 110265 118733 118733 120269 +10004 +1536 +1536 +9.0727% +1.2937% +1.2937%
MTAC_Yeast_Alternating_3min 48709 48709 49418 +709 +709 +1.4556% +1.4556%
MTAC_Yeast_Alternating_5min 53969 55370 55197 56069 +2100 +699 +872 +3.8911% +1.2624% +1.5798%
MTAC_Yeast_Standard_3min 48621 50039 49836 50624 +2003 +585 +788 +4.1196% +1.1691% +1.5812%
MTAC_Yeast_Standard_5min 55060 56122 56122 57030 +1970 +908 +908 +3.5779% +1.6179% +1.6179%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 61638 +10366 +2736 +2736 +20.2177% +4.6450% +4.6450%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 15221 +781 +205 +205 +5.4086% +1.3652% +1.3652%
SCP_Astral_1000pg_24ms 14483 15025 15026 14695 +212 -330 -331 +1.4638% -2.1963% -2.2028%
SCP_Astral_1000pg_3ms 8740 9376 9376 9341 +601 -35 -35 +6.8764% -0.3733% -0.3733%
SCP_Astral_1000pg_6ms 8898 9259 9259 9844 +946 +585 +585 +10.6316% +6.3182% +6.3182%
SCP_Astral_10ng_12ms 34865 36293 36293 36143 +1278 -150 -150 +3.6656% -0.4133% -0.4133%
SCP_Astral_10ng_24ms 24649 25391 25531 25049 +400 -342 -482 +1.6228% -1.3469% -1.8879%
SCP_Astral_10ng_6ms 40156 41556 41511 41593 +1437 +37 +82 +3.5785% +0.0890% +0.1975%
SCP_Astral_10ng_ms 36688 37676 37676 37947 +1259 +271 +271 +3.4316% +0.7193% +0.7193%
SCP_Astral_250pg_12ms 3666 3949 3949 4097 +431 +148 +148 +11.7567% +3.7478% +3.7478%
SCP_Astral_250pg_24ms 5299 5611 5611 5615 +316 +4 +4 +5.9634% +0.0713% +0.0713%
SCP_Astral_250pg_3ms 675 721 721 907 +232 +186 +186 +34.3704% +25.7975% +25.7975%
SCP_Astral_250pg_6ms 1436 1738 1738 2115 +679 +377 +377 +47.2841% +21.6916% +21.6916%
SCP_Astral_500pg_12ms 7794 7972 7972 8162 +368 +190 +190 +4.7216% +2.3833% +2.3833%
SCP_Astral_500pg_24ms 9158 9342 9342 9115 -43 -227 -227 -0.4695% -2.4299% -2.4299%
SCP_Astral_500pg_3ms 1846 2626 +780 +42.2535%
SCP_Astral_500pg_6ms 3874 4155 4155 4689 +815 +534 +534 +21.0377% +12.8520% +12.8520%
SCP_Astral_MBR 24110 25035 25035 24783 +673 -252 -252 +2.7914% -1.0066% -1.0066%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 55846 -676 -676 -1.1960% -1.1960%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 56969 +6269 +848 +848 +12.3649% +1.5110% +1.5110%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56452 +5861 +131 +131 +11.5851% +0.2326% +0.2326%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 90111 +2191 -2703 -2703 +2.4920% -2.9123% -2.9123%
MTAC_3P_Alternating 63773 64043 64043 63636 -137 -407 -407 -0.2148% -0.6355% -0.6355%
MTAC_3P_Standard 64317 64591 64591 64362 +45 -229 -229 +0.0700% -0.3545% -0.3545%
MTAC_Yeast_Alternating_3min 12100 12100 12079 -21 -21 -0.1736% -0.1736%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12541 +109 +130 +128 +0.8768% +1.0475% +1.0312%
MTAC_Yeast_Standard_3min 12008 12020 12034 12050 +42 +30 +16 +0.3498% +0.2496% +0.1330%
MTAC_Yeast_Standard_5min 12561 12508 12508 12603 +42 +95 +95 +0.3344% +0.7595% +0.7595%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 153113 +6889 -689 -689 +4.7113% -0.4480% -0.4480%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 9403 +240 -135 -135 +2.6192% -1.4154% -1.4154%
SCP_Astral_1000pg_24ms 9298 9857 9852 9523 +225 -334 -329 +2.4199% -3.3885% -3.3394%
SCP_Astral_1000pg_3ms 2450 6084 6084 6273 +3823 +189 +189 +156.0408% +3.1065% +3.1065%
SCP_Astral_1000pg_6ms 4703 4588 4588 4940 +237 +352 +352 +5.0393% +7.6722% +7.6722%
SCP_Astral_10ng_12ms 16190 16202 16202 16289 +99 +87 +87 +0.6115% +0.5370% +0.5370%
SCP_Astral_10ng_24ms 13599 13792 13697 13597 -2 -195 -100 -0.0147% -1.4139% -0.7301%
SCP_Astral_10ng_6ms 17017 17179 17127 17111 +94 -68 -16 +0.5524% -0.3958% -0.0934%
SCP_Astral_10ng_ms 16252 16276 16276 16104 -148 -172 -172 -0.9107% -1.0568% -1.0568%
SCP_Astral_250pg_12ms 3647 3913 3913 3429 -218 -484 -484 -5.9775% -12.3690% -12.3690%
SCP_Astral_250pg_24ms 4300 4603 4603 4489 +189 -114 -114 +4.3953% -2.4766% -2.4766%
SCP_Astral_250pg_3ms 576 22 22 901 +325 +879 +879 +56.4236% +3995.4545% +3995.4545%
SCP_Astral_250pg_6ms 637 2080 2080 2062 +1425 -18 -18 +223.7049% -0.8654% -0.8654%
SCP_Astral_500pg_12ms 6245 6346 6346 5987 -258 -359 -359 -4.1313% -5.6571% -5.6571%
SCP_Astral_500pg_24ms 6722 6729 6729 6928 +206 +199 +199 +3.0646% +2.9573% +2.9573%
SCP_Astral_500pg_3ms 982 2329 +1347 +137.1690%
SCP_Astral_500pg_6ms 3708 4007 4007 4009 +301 +2 +2 +8.1176% +0.0499% +0.0499%
SCP_Astral_MBR 20165 20214 20214 20020 -145 -194 -194 -0.7191% -0.9597% -0.9597%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4728 +66 +66 +1.4157% +1.4157%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 243979 +4495 -1825 -1825 +1.8770% -0.7425% -0.7425%
EWZ_2P_noMBR_Exploris 235990 245406 245406 241352 +5362 -4054 -4054 +2.2721% -1.6520% -1.6520%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8210 +365 +36 +36 +4.6526% +0.4404% +0.4404%
MTAC_3P_Alternating 11361 11494 11494 11540 +179 +46 +46 +1.5756% +0.4002% +0.4002%
MTAC_3P_Standard 11473 11609 11609 11681 +208 +72 +72 +1.8130% +0.6202% +0.6202%
MTAC_Yeast_Alternating_3min 4135 4135 4144 +9 +9 +0.2177% +0.2177%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4278 +63 +49 +46 +1.4947% +1.1587% +1.0870%
MTAC_Yeast_Standard_3min 4075 4100 4113 4130 +55 +30 +17 +1.3497% +0.7317% +0.4133%
MTAC_Yeast_Standard_5min 4249 4249 4249 4295 +46 +46 +46 +1.0826% +1.0826% +1.0826%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 7705 +450 +82 +82 +6.2026% +1.0757% +1.0757%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 3334 +89 -63 -63 +2.7427% -1.8546% -1.8546%
SCP_Astral_1000pg_24ms 3254 3466 3469 3333 +79 -133 -136 +2.4278% -3.8373% -3.9204%
SCP_Astral_1000pg_3ms 2450 2396 2396 2468 +18 +72 +72 +0.7347% +3.0050% +3.0050%
SCP_Astral_1000pg_6ms 2508 2436 2436 2613 +105 +177 +177 +4.1866% +7.2660% +7.2660%
SCP_Astral_10ng_12ms 5579 5627 5627 5654 +75 +27 +27 +1.3443% +0.4798% +0.4798%
SCP_Astral_10ng_24ms 4721 4803 4754 4719 -2 -84 -35 -0.0424% -1.7489% -0.7362%
SCP_Astral_10ng_6ms 5846 5950 5930 5928 +82 -22 -2 +1.4027% -0.3697% -0.0337%
SCP_Astral_10ng_ms 5611 5655 5655 5595 -16 -60 -60 -0.2852% -1.0610% -1.0610%
SCP_Astral_250pg_12ms 1292 1424 1424 1273 -19 -151 -151 -1.4706% -10.6039% -10.6039%
SCP_Astral_250pg_24ms 1568 1660 1660 1633 +65 -27 -27 +4.1454% -1.6265% -1.6265%
SCP_Astral_250pg_3ms 307 8 8 339 +32 +331 +331 +10.4235% +4137.5000% +4137.5000%
SCP_Astral_250pg_6ms 637 756 756 791 +154 +35 +35 +24.1758% +4.6296% +4.6296%
SCP_Astral_500pg_12ms 2207 2275 2275 2184 -23 -91 -91 -1.0421% -4% -4%
SCP_Astral_500pg_24ms 2403 2388 2388 2467 +64 +79 +79 +2.6633% +3.3082% +3.3082%
SCP_Astral_500pg_3ms 525 891 +366 +69.7143%
SCP_Astral_500pg_6ms 1318 1447 1447 1466 +148 +19 +19 +11.2291% +1.3131% +1.3131%
SCP_Astral_MBR 4708 4754 4754 4708 +0 -46 -46 +0% -0.9676% -0.9676%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4728 +66 +66 +1.4157% +1.4157%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 7065 +234 +27 +27 +3.4256% +0.3836% +0.3836%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7091 +233 -24 -24 +3.3975% -0.3373% -0.3373%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0006 -0.0001 -0.0004 -0.0004
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0001 +0.0004 -0.0000 -0.0000
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0002 +0.0016 +0.0000 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0022 -0.0003 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0010 -0.0007 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0016 +0.0003 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0020 -0.0010 -0.0001
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 0.0002 +0.0004 -0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0015 +0.0008 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0029 +0.0025 +0.0004
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0047 -0.0017 -0.0010 -0.0010
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0022 -0.0020 -0.0011 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0014 +0.0008 +0.0009 +0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0014 +0.0006 -0.0023
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0028 -0.0004 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 0.0010 +0.0017 +0.0012
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0045 -0.0007 -0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0028 -0.0026 -0.0016
SCP_Astral_250pg_6ms_Entrapment -0.0051
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0031 -0.0010 -0.0012 -0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0040 -0.0027 -0.0009
SCP_Astral_500pg_3ms_Entrapment -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 -0.0035 -0.0004 -0.0004
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0008 +0.0018 +0.0009
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0011 -0.0001 +0.0020 +0.0020
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0005 +0.0006 +0.0002 +0.0002
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0026 -0.0013 -0.0004 -0.0004
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0048 +0.0002 +0.0002
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0041 +0.0000 -0.0003 -0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0052 +0.0006 -0.0002 -0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0038 -0.0002 +0.0007
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 0.0006 +0.0035 +0.0004
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0045 +0.0004 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0054 +0.0016 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0058 +0.0001 -0.0022 -0.0022
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0039 -0.0022 +0.0010 +0.0010
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0059 -0.0005 -0.0010 -0.0010
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0003 +0.0030 +0.0020
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0053 -0.0016 +0.0020
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0013 +0.0042 +0.0011
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0081 -0.0028 -0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0021 +0.0021 +0.0021
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 0.0025 +0.0124 +0.0092 +0.0092
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0035 +0.0001 +0.0019 +0.0019
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0029 -0.0009 -0.0020
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0038 +0.0004 -0.0108
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0061 -0.0016 -0.0015 -0.0015
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0012 +0.0047 +0.0007
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0004 +0.0001 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0003 +0.0004 -0.0000 -0.0000
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 0.0000 +0.0009 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0013 -0.0000 -0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0005 -0.0002 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0010 -0.0002 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0014 -0.0006 -0.0004
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0004 +0.0008 -0.0001
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0015 +0.0000 -0.0002
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0023 +0.0023 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0025 -0.0005 -0.0003 -0.0003
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0019 -0.0021 -0.0014 -0.0014
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0011 +0.0006 +0.0002 +0.0002
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0011 +0.0003 -0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0022 -0.0002 -0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 0.0006 +0.0011 +0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0024 +0.0006 +0.0003
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0015 -0.0008 -0.0007
SCP_Astral_250pg_6ms_Entrapment -0.0037
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0019 -0.0001 -0.0007 -0.0007
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0031 -0.0016 -0.0011
SCP_Astral_500pg_3ms_Entrapment 0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0021 +0.0005 +0.0005
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0007 +0.0010 +0.0007
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0011 -0.0009 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 0.0004 +0.0005 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0014 -0.0005 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0029 +0.0001 +0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0026 +0.0012 -0.0004 -0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0031 +0.0007 +0.0001 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0026 -0.0003 +0.0001
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 0.0003 +0.0029 -0.0003
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0031 +0.0006 +0.0001
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0046 +0.0002 +0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0021 +0.0023 -0.0006 -0.0006
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0023 +0.0001 +0.0012 +0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0044 +0.0004 -0.0011 -0.0011
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0016 +0.0016 -0.0003
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0033 -0.0012 +0.0013
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0025 +0.0014 +0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0050 -0.0011 -0.0009
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0017 -0.0004 +0.0015
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0055 +0.0005 +0.0026 +0.0026
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 0.0027 +0.0126 +0.0095 +0.0095
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0023 +0.0016 +0.0017 +0.0017
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0011 +0.0009 -0.0010
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0028 +0.0004 -0.0095
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0047 -0.0027 -0.0025 -0.0025
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0010 +0.0014 +0.0005
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0068 -0.0063 +0.0001 +0.0001

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.0097 -0.0379 -0.3989 -0.3989

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 0 +1 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 13 +4 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 12 +4 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 13 +3 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1404 -0.0055 -0.0019 -0.0019
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1343 -0.0050 -0.0020 -0.0020
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1429 -0.0027 -0.0027
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1390 -0.0141 -0.0013 -0.0014
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1623 -0.0075 -0.0021 -0.0018
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1352 -0.0151 -0.0017 -0.0017
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1506 +0.0026 +0.0006 +0.0006
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0737 -0.0026 -0.0000 -0.0000
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0697 -0.0027 -0.0008 -0.0008
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0671 +0.0001 +0.0001
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0593 -0.0185 -0.0003 -0.0006
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0758 -0.0034 -0.0014 -0.0013
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0576 -0.0195 +0.0009 +0.0009
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1013 -0.0016 -0.0007 -0.0007
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0784 -0.0024 +0 +0.0094
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0380 -0.0079 +0 +0.0028
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0061 +0.0017 +0 +0.0018
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1296 +0.0015 +0 +0.0035
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0740 -0.0055 +0 +0.0010
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0226 -0.0083 +0 -0.0028
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2103 -0.0038 +0 -0.0131
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0745 +0.0068 +0 -0.0010
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2662 +0.0186 +0 -0.0079
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1039 +0.0049 +0 +0.0035
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0525 +0.0004 +0 -0.0014
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2078 +0.0054 +0 +0.0025
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0605 -0.0014 +0 +0.0141
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1082 +0.0042 +0 -0.0035
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0570 +0.0227 +0 -0.0336
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0723 +0.0011 +0 +0.0058
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0375 -0.0083 +0 +0.0007
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0101 +0.0048 +0 +0.0036
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1271 +0.0000 +0 +0.0026
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0729 -0.0064 +0 +0.0021
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0202 -0.0075 +0 -0.0045
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2093 -0.0039 +0 -0.0039
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0685 +0.0080 +0 -0.0058
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.2880 +0.0484 +0 -0.0162
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0909 +0.0037 +0 +0.0032
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0490 +0.0006 +0 -0.0018
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2053 +0.0038 +0 +0.0027
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0471 -0.0047 +0 +0.0085
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1021 +0.0068 +0 -0.0142
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0618 +0.0509 +0 -0.0425
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2685 +0.0367 +0 -0.0301
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2188 +0.0142 +0 +0.0062
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2597 +0.0148 +0 -0.0110
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2807 +0.0404 +0 -0.0279
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2187 +0.0168 +0 -0.0043
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2610 +0.0186 +0 -0.0131
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.5366 +0.0339 +0 -0.0756
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1566 -0.0061 +0 -0.0001
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.7393 +0.0041 +0 -0.0692
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3156 +0.0015 +0 -0.0231
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1523 +0.0655 +0 -0.0228
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3208 +0.0280 +0 -0.0096
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.5627 -0.0228 +0 -0.0334
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.1986 +0.0964 +0 -0.0476
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.1435 +0.0666 +0 -0.0090
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1388 +0.0230 +0 -0.0137
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0680 +0.0026 +0 -0.0077
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1184 -0.0177 +0 +0.0062
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1167 -0.0076 +0 -0.0077
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0721 +0.0026 +0 +0.0016
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1222 +0.0033 +0 -0.0072
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.1856 +0.0457 +0 -0.0634
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0528 -0.0061 +0 -0.0048
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.4728 -0.0364 +0 +0.0508
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0575 -0.0059 +0 -0.0012
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0340 +0.0045 +0 -0.0006
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0741 -0.0018 +0 +0.0000
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.1911 -0.0276 +0 -0.0149
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0714 +0.0043 +0 -0.0044
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.3639 -0.1098 +0 -0.0573
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 20.7400 -3.3300 -2.0600 +1.0900 -13.8346% -9.0351% +5.5471%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 9.6500 -3.1000 -4.0300 +1.0800 -24.3137% -29.4591% +12.6021%
MTAC_3P_Standard 12.3100 13.0600 10.2700 9.7900 -2.5200 -3.2700 -0.4800 -20.4712% -25.0383% -4.6738%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 4.0400 -1.4500 -0.0200 -26.4117% -0.4926%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.1800 -1.2000 -0.5400 +0.0300 -22.3048% -11.4407% +0.7229%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 4.2200 -1.2100 -1.4300 +0.2000 -22.2836% -25.3097% +4.9751%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.1900 -1.3600 -0.1100 -0.1000 -24.5045% -2.5581% -2.3310%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 21.7700 -5.8900 -1.9500 +1.4500 -21.2943% -8.2209% +7.1358%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000 4.0300 -1.7600 -1.8700 -30.3972% -31.6949%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400 4.3500 -1.9100 -0.8500 -0.0900 -30.5112% -16.3462% -2.0270%
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.9700 -0.5500 -2.1400 +0.2100 -12.1681% -35.0245% +5.5851%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.5100 -2.2300 -0.0200 -0.0200 -38.8502% -0.5666% -0.5666%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.2400 -1.8300 -0.3900 -0.2000 -25.8840% -6.9272% -3.6765%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200 5.7400 -1.8500 -2.6200 -0.1800 -24.3742% -31.3397% -3.0405%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 4.9100 -2.4700 +0.0200 +0.1200 -33.4688% +0.4090% +2.5052%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.2600 -2.1900 -0.9300 -0.4000 -33.9535% -17.9191% -8.5837%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.4000 -1.3400 -0.1100 -0.0700 -28.2700% -3.1339% -2.0173%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100 3.5800 -1.6800 -0.6100 -0.0300 -31.9392% -14.5585% -0.8310%
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3100 -0.8600 -0.0800 +0.0400 -20.6235% -2.3599% +1.2232%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.6200 -1.6600 +0.1300 +0.0800 -31.4394% +3.7249% +2.2599%
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300 3.7300 -1.0000 -21.1416%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.4300 -1.2200 +0 -0.0800 -26.2366% +0% -2.2792%
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 5.3000 +0.9900 -0.4400 +22.9698% -7.6655%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 32.6400 +3.6400 +3.4500 +7.8900 +12.5517% +11.8191% +31.8788%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 30.6800 +3.5700 +2.3700 +8.6100 +13.1686% +8.3716% +39.0122%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png