Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1260895 +164401 -50516 -50516 +14.9933% -3.8520% -3.8520%
MTAC_3P_Alternating 586322 616475 616475 612546 +26224 -3929 -3929 +4.4726% -0.6373% -0.6373%
MTAC_3P_Standard 596590 623500 623500 621617 +25027 -1883 -1883 +4.1950% -0.3020% -0.3020%
MTAC_Yeast_Alternating_3min 137143 137143 137651 +508 +508 +0.3704% +0.3704%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156666 +1025 -67 +104 +0.6586% -0.0427% +0.0664%
MTAC_Yeast_Standard_3min 138509 139777 139662 139774 +1265 -3 +112 +0.9133% -0.0021% +0.0802%
MTAC_Yeast_Standard_5min 158962 158983 158983 159560 +598 +577 +577 +0.3762% +0.3629% +0.3629%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1166754 +144018 +11221 +11221 +14.0816% +0.9711% +0.9711%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 41306 +424 -549 -549 +1.0371% -1.3117% -1.3117%
SCP_Astral_1000pg_24ms 41069 42339 42344 39406 -1663 -2933 -2938 -4.0493% -6.9274% -6.9384%
SCP_Astral_1000pg_3ms 8740 23115 23115 23032 +14292 -83 -83 +163.5240% -0.3591% -0.3591%
SCP_Astral_1000pg_6ms 16935 17553 17553 18407 +1472 +854 +854 +8.6921% +4.8653% +4.8653%
SCP_Astral_10ng_12ms 99908 102934 102934 101321 +1413 -1613 -1613 +1.4143% -1.5670% -1.5670%
SCP_Astral_10ng_24ms 71098 72525 72805 70190 -908 -2335 -2615 -1.2771% -3.2196% -3.5918%
SCP_Astral_10ng_6ms 115157 117282 117413 116541 +1384 -741 -872 +1.2018% -0.6318% -0.7427%
SCP_Astral_10ng_ms 105704 106497 106497 106254 +550 -243 -243 +0.5203% -0.2282% -0.2282%
SCP_Astral_250pg_12ms 10194 10806 10806 11008 +814 +202 +202 +7.9851% +1.8693% +1.8693%
SCP_Astral_250pg_24ms 14807 15433 15433 14955 +148 -478 -478 +0.9995% -3.0973% -3.0973%
SCP_Astral_250pg_3ms 1261 2032 2032 2637 +1376 +605 +605 +109.1197% +29.7736% +29.7736%
SCP_Astral_250pg_6ms 1436 4783 4783 5650 +4214 +867 +867 +293.4540% +18.1267% +18.1267%
SCP_Astral_500pg_12ms 21710 21895 21895 22130 +420 +235 +235 +1.9346% +1.0733% +1.0733%
SCP_Astral_500pg_24ms 25860 26143 26143 23817 -2043 -2326 -2326 -7.9002% -8.8972% -8.8972%
SCP_Astral_500pg_3ms 3484 6926 +3442 +98.7945%
SCP_Astral_500pg_6ms 10699 11474 11474 12815 +2116 +1341 +1341 +19.7775% +11.6873% +11.6873%
SCP_Astral_MBR 92167 93648 93648 92478 +311 -1170 -1170 +0.3374% -1.2494% -1.2494%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 55203 -1319 -1319 -2.3336% -2.3336%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1772403 +109409 -32845 -32845 +6.5790% -1.8194% -1.8194%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1712022 +103116 -58737 -58737 +6.4091% -3.3171% -3.3171%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 137472 +25968 +3824 +3824 +23.2889% +2.8612% +2.8612%
MTAC_3P_Alternating 108267 117420 117420 118520 +10253 +1100 +1100 +9.4701% +0.9368% +0.9368%
MTAC_3P_Standard 110265 118733 118733 120388 +10123 +1655 +1655 +9.1806% +1.3939% +1.3939%
MTAC_Yeast_Alternating_3min 48709 48709 49256 +547 +547 +1.1230% +1.1230%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55800 +1831 +430 +603 +3.3927% +0.7766% +1.0925%
MTAC_Yeast_Standard_3min 48621 50039 49836 50453 +1832 +414 +617 +3.7679% +0.8274% +1.2381%
MTAC_Yeast_Standard_5min 55060 56122 56122 56826 +1766 +704 +704 +3.2074% +1.2544% +1.2544%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 60729 +9457 +1827 +1827 +18.4448% +3.1018% +3.1018%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 14755 +315 -261 -261 +2.1814% -1.7381% -1.7381%
SCP_Astral_1000pg_24ms 14483 15025 15026 13837 -646 -1188 -1189 -4.4604% -7.9068% -7.9130%
SCP_Astral_1000pg_3ms 8740 9376 9376 9324 +584 -52 -52 +6.6819% -0.5546% -0.5546%
SCP_Astral_1000pg_6ms 8898 9259 9259 9757 +859 +498 +498 +9.6539% +5.3786% +5.3786%
SCP_Astral_10ng_12ms 34865 36293 36293 35465 +600 -828 -828 +1.7209% -2.2814% -2.2814%
SCP_Astral_10ng_24ms 24649 25391 25531 24374 -275 -1017 -1157 -1.1157% -4.0054% -4.5317%
SCP_Astral_10ng_6ms 40156 41556 41511 41181 +1025 -375 -330 +2.5525% -0.9024% -0.7950%
SCP_Astral_10ng_ms 36688 37676 37676 37848 +1160 +172 +172 +3.1618% +0.4565% +0.4565%
SCP_Astral_250pg_12ms 3666 3949 3949 4059 +393 +110 +110 +10.7201% +2.7855% +2.7855%
SCP_Astral_250pg_24ms 5299 5611 5611 5383 +84 -228 -228 +1.5852% -4.0634% -4.0634%
SCP_Astral_250pg_3ms 675 721 721 988 +313 +267 +267 +46.3704% +37.0319% +37.0319%
SCP_Astral_250pg_6ms 1436 1738 1738 2153 +717 +415 +415 +49.9304% +23.8780% +23.8780%
SCP_Astral_500pg_12ms 7794 7972 7972 8132 +338 +160 +160 +4.3367% +2.0070% +2.0070%
SCP_Astral_500pg_24ms 9158 9342 9342 8398 -760 -944 -944 -8.2988% -10.1049% -10.1049%
SCP_Astral_500pg_3ms 1846 2609 +763 +41.3326%
SCP_Astral_500pg_6ms 3874 4155 4155 4699 +825 +544 +544 +21.2958% +13.0927% +13.0927%
SCP_Astral_MBR 24110 25035 25035 24232 +122 -803 -803 +0.5060% -3.2075% -3.2075%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 55203 -1319 -1319 -2.3336% -2.3336%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 56650 +5950 +529 +529 +11.7357% +0.9426% +0.9426%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56537 +5946 +216 +216 +11.7531% +0.3835% +0.3835%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 90549 +2629 -2265 -2265 +2.9902% -2.4404% -2.4404%
MTAC_3P_Alternating 63773 64043 64043 63873 +100 -170 -170 +0.1568% -0.2654% -0.2654%
MTAC_3P_Standard 64317 64591 64591 64576 +259 -15 -15 +0.4027% -0.0232% -0.0232%
MTAC_Yeast_Alternating_3min 12100 12100 12069 -31 -31 -0.2562% -0.2562%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12501 +69 +90 +88 +0.5550% +0.7252% +0.7089%
MTAC_Yeast_Standard_3min 12008 12020 12034 11995 -13 -25 -39 -0.1083% -0.2080% -0.3241%
MTAC_Yeast_Standard_5min 12561 12508 12508 12501 -60 -7 -7 -0.4777% -0.0560% -0.0560%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 153165 +6941 -637 -637 +4.7468% -0.4142% -0.4142%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 9494 +331 -44 -44 +3.6124% -0.4613% -0.4613%
SCP_Astral_1000pg_24ms 9298 9857 9852 9270 -28 -587 -582 -0.3011% -5.9552% -5.9074%
SCP_Astral_1000pg_3ms 2450 6084 6084 6180 +3730 +96 +96 +152.2449% +1.5779% +1.5779%
SCP_Astral_1000pg_6ms 4703 4588 4588 4950 +247 +362 +362 +5.2520% +7.8901% +7.8901%
SCP_Astral_10ng_12ms 16190 16202 16202 16170 -20 -32 -32 -0.1235% -0.1975% -0.1975%
SCP_Astral_10ng_24ms 13599 13792 13697 13529 -70 -263 -168 -0.5147% -1.9069% -1.2265%
SCP_Astral_10ng_6ms 17017 17179 17127 17108 +91 -71 -19 +0.5348% -0.4133% -0.1109%
SCP_Astral_10ng_ms 16252 16276 16276 16129 -123 -147 -147 -0.7568% -0.9032% -0.9032%
SCP_Astral_250pg_12ms 3647 3913 3913 3661 +14 -252 -252 +0.3839% -6.4401% -6.4401%
SCP_Astral_250pg_24ms 4300 4603 4603 4334 +34 -269 -269 +0.7907% -5.8440% -5.8440%
SCP_Astral_250pg_3ms 576 22 22 980 +404 +958 +958 +70.1389% +4354.5455% +4354.5455%
SCP_Astral_250pg_6ms 637 2080 2080 1994 +1357 -86 -86 +213.0298% -4.1346% -4.1346%
SCP_Astral_500pg_12ms 6245 6346 6346 5941 -304 -405 -405 -4.8679% -6.3820% -6.3820%
SCP_Astral_500pg_24ms 6722 6729 6729 6483 -239 -246 -246 -3.5555% -3.6558% -3.6558%
SCP_Astral_500pg_3ms 982 2424 +1442 +146.8432%
SCP_Astral_500pg_6ms 3708 4007 4007 4117 +409 +110 +110 +11.0302% +2.7452% +2.7452%
SCP_Astral_MBR 20165 20214 20214 20041 -124 -173 -173 -0.6149% -0.8558% -0.8558%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4702 +40 +40 +0.8580% +0.8580%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 244921 +5437 -883 -883 +2.2703% -0.3592% -0.3592%
EWZ_2P_noMBR_Exploris 235990 245406 245406 242276 +6286 -3130 -3130 +2.6637% -1.2754% -1.2754%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8235 +390 +61 +61 +4.9713% +0.7463% +0.7463%
MTAC_3P_Alternating 11361 11494 11494 11540 +179 +46 +46 +1.5756% +0.4002% +0.4002%
MTAC_3P_Standard 11473 11609 11609 11683 +210 +74 +74 +1.8304% +0.6374% +0.6374%
MTAC_Yeast_Alternating_3min 4135 4135 4136 +1 +1 +0.0242% +0.0242%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4269 +54 +40 +37 +1.2811% +0.9459% +0.8743%
MTAC_Yeast_Standard_3min 4075 4100 4113 4090 +15 -10 -23 +0.3681% -0.2439% -0.5592%
MTAC_Yeast_Standard_5min 4249 4249 4249 4250 +1 +1 +1 +0.0235% +0.0235% +0.0235%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 7623 +368 +0 +0 +5.0724% +0% +0%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 3393 +148 -4 -4 +4.5609% -0.1178% -0.1178%
SCP_Astral_1000pg_24ms 3254 3466 3469 3238 -16 -228 -231 -0.4917% -6.5782% -6.6590%
SCP_Astral_1000pg_3ms 2450 2396 2396 2411 -39 +15 +15 -1.5918% +0.6260% +0.6260%
SCP_Astral_1000pg_6ms 2508 2436 2436 2610 +102 +174 +174 +4.0670% +7.1429% +7.1429%
SCP_Astral_10ng_12ms 5579 5627 5627 5595 +16 -32 -32 +0.2868% -0.5687% -0.5687%
SCP_Astral_10ng_24ms 4721 4803 4754 4709 -12 -94 -45 -0.2542% -1.9571% -0.9466%
SCP_Astral_10ng_6ms 5846 5950 5930 5929 +83 -21 -1 +1.4198% -0.3529% -0.0169%
SCP_Astral_10ng_ms 5611 5655 5655 5619 +8 -36 -36 +0.1426% -0.6366% -0.6366%
SCP_Astral_250pg_12ms 1292 1424 1424 1333 +41 -91 -91 +3.1734% -6.3904% -6.3904%
SCP_Astral_250pg_24ms 1568 1660 1660 1543 -25 -117 -117 -1.5944% -7.0482% -7.0482%
SCP_Astral_250pg_3ms 307 8 8 352 +45 +344 +344 +14.6580% +4300% +4300%
SCP_Astral_250pg_6ms 637 756 756 763 +126 +7 +7 +19.7802% +0.9259% +0.9259%
SCP_Astral_500pg_12ms 2207 2275 2275 2141 -66 -134 -134 -2.9905% -5.8901% -5.8901%
SCP_Astral_500pg_24ms 2403 2388 2388 2285 -118 -103 -103 -4.9105% -4.3132% -4.3132%
SCP_Astral_500pg_3ms 525 919 +394 +75.0476%
SCP_Astral_500pg_6ms 1318 1447 1447 1501 +183 +54 +54 +13.8847% +3.7319% +3.7319%
SCP_Astral_MBR 4708 4754 4754 4677 -31 -77 -77 -0.6585% -1.6197% -1.6197%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4702 +40 +40 +0.8580% +0.8580%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 7085 +254 +47 +47 +3.7183% +0.6678% +0.6678%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7097 +239 -18 -18 +3.4850% -0.2530% -0.2530%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0005 +0.0001 -0.0002 -0.0002
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0004 +0.0001 -0.0003 -0.0003
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 -0.0001 +0.0013 -0.0003 -0.0003
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0016 +0.0004 +0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0010 -0.0007 +0.0002 +0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0019 +0.0000 -0.0006 -0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0016 -0.0006 +0.0003
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 0.0000 +0.0002 -0.0002
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0030 -0.0007 -0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0023 +0.0031 +0.0010
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0046 -0.0016 -0.0009 -0.0009
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0023 -0.0021 -0.0012 -0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0011 +0.0011 +0.0012 +0.0012
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0011 +0.0009 -0.0020
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0026 -0.0002 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0007 +0.0001 -0.0004
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0042 -0.0003 -0.0002
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0011 -0.0009 +0.0001
SCP_Astral_250pg_6ms_Entrapment -0.0051
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0011 +0.0011 +0.0009 +0.0009
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0036 -0.0024 -0.0005
SCP_Astral_500pg_3ms_Entrapment -0.0013 0.0005 +0.0018
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 0.0003 +0.0033 +0.0033
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0022 +0.0005 -0.0005
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0029 -0.0019 +0.0003 +0.0003
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0010 +0.0000 -0.0004 -0.0004
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0031 -0.0019 -0.0009 -0.0009
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0045 +0.0005 +0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0041 +0.0000 -0.0002 -0.0002
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0065 -0.0007 -0.0015 -0.0015
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0029 +0.0007 +0.0017
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0001 +0.0029 -0.0003
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0046 +0.0003 -0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0049 +0.0021 +0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0064 -0.0005 -0.0029 -0.0029
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0050 -0.0032 -0.0000 -0.0000
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0044 +0.0011 +0.0006 +0.0006
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0056 -0.0023 -0.0033
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0044 -0.0008 +0.0029
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0013 +0.0041 +0.0010
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0066 -0.0012 +0.0011
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0060 -0.0019 -0.0019
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0087 +0.0012 -0.0020 -0.0020
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0011 +0.0025 +0.0043 +0.0043
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0038 -0.0018 -0.0030
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0012 +0.0029 -0.0083
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0008 +0.0037 +0.0037 +0.0037
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0025 +0.0034 -0.0007
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0004 +0.0001 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0002 +0.0003 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 -0.0001 +0.0008 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0009 +0.0003 +0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0004 -0.0000 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0010 -0.0002 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0010 -0.0002 +0.0000
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 0.0005 +0.0009 +0.0000
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0021 -0.0006 -0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0023 +0.0022 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0029 -0.0009 -0.0007 -0.0007
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0018 -0.0020 -0.0012 -0.0012
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0012 +0.0004 +0.0000 +0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0008 +0.0005 -0.0012
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0018 +0.0001 +0.0002
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0001 +0.0005 -0.0002
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0028 +0.0002 -0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 0.0002 +0.0009 +0.0010
SCP_Astral_250pg_6ms_Entrapment -0.0037
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0013 +0.0006 -0.0001 -0.0001
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0029 -0.0013 -0.0009
SCP_Astral_500pg_3ms_Entrapment 0.0019 0.0028 +0.0009
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0017 +0.0008 +0.0008
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0016 +0.0001 -0.0002
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0000 +0.0001 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0017 -0.0009 -0.0005 -0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0021 +0.0009 +0.0009
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0020 +0.0017 +0.0001 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0039 -0.0001 -0.0007 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0025 -0.0002 +0.0002
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 0.0003 +0.0029 -0.0002
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0023 +0.0014 +0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0034 +0.0014 +0.0021
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0030 +0.0014 -0.0014 -0.0014
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0035 -0.0010 -0.0000 -0.0000
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0032 +0.0015 +0.0000 +0.0000
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0040 -0.0008 -0.0027
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0037 -0.0016 +0.0009
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0015 +0.0024 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0041 -0.0003 -0.0000
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0043 -0.0030 -0.0011
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0079 -0.0018 +0.0003 +0.0003
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0050 +0.0049 +0.0018 +0.0018
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0025 +0.0015 +0.0015 +0.0015
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0022 -0.0003 -0.0021
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0013 +0.0019 -0.0080
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0013 +0.0007 +0.0009 +0.0009
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0013 +0.0011 +0.0002
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0052 -0.0079 -0.0015 -0.0015

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0.0606 +0.0130 -0.3480 -0.3480

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 12 +4 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 12 +4 +0 -1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 12 +3 +0 -1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1422 -0.0037 -0.0001 -0.0001
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1361 -0.0032 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1449 -0.0006 -0.0006
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1395 -0.0136 -0.0008 -0.0009
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1629 -0.0068 -0.0014 -0.0011
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1358 -0.0145 -0.0011 -0.0011
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1515 +0.0035 +0.0015 +0.0015
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0737 -0.0026 -0.0000 -0.0000
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0703 -0.0021 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0680 +0.0010 +0.0010
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0598 -0.0180 +0.0002 -0.0000
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0761 -0.0031 -0.0011 -0.0010
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0568 -0.0202 +0.0002 +0.0002
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1020 -0.0009 -0.0000 -0.0000
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0762 -0.0024 +0 +0.0073
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0388 -0.0079 +0 +0.0036
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 0.0034 +0.0017 +0 -0.0009
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1284 +0.0015 +0 +0.0024
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0741 -0.0055 +0 +0.0011
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0264 -0.0083 +0 +0.0010
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2192 -0.0038 +0 -0.0042
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0742 +0.0068 +0 -0.0013
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2738 +0.0186 +0 -0.0003
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1034 +0.0049 +0 +0.0030
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0519 +0.0004 +0 -0.0020
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2093 +0.0054 +0 +0.0041
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0506 -0.0014 +0 +0.0042
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1105 +0.0042 +0 -0.0013
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0598 +0.0227 +0 -0.0308
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0694 +0.0011 +0 +0.0030
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0390 -0.0083 +0 +0.0022
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 0.0061 +0.0048 +0 -0.0004
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1228 +0.0000 +0 -0.0016
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0713 -0.0064 +0 +0.0005
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0233 -0.0075 +0 -0.0014
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2146 -0.0039 +0 +0.0013
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0638 +0.0080 +0 -0.0105
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.2995 +0.0484 +0 -0.0047
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0906 +0.0037 +0 +0.0029
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0481 +0.0006 +0 -0.0027
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2064 +0.0038 +0 +0.0038
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0413 -0.0047 +0 +0.0027
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1097 +0.0068 +0 -0.0066
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.0740 +0.0509 +0 -0.0303
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2677 +0.0367 +0 -0.0309
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2194 +0.0142 +0 +0.0068
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2660 +0.0148 +0 -0.0047
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2953 +0.0404 +0 -0.0132
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2205 +0.0168 +0 -0.0025
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2668 +0.0186 +0 -0.0072
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.5618 +0.0339 +0 -0.0505
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1611 -0.0061 +0 +0.0044
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.8626 +0.0041 +0 +0.0542
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3225 +0.0015 +0 -0.0162
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1567 +0.0655 +0 -0.0183
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3307 +0.0280 +0 +0.0003
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.6076 -0.0228 +0 +0.0115
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2351 +0.0964 +0 -0.0111
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.0915 +0.0666 +0 -0.0610
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1431 +0.0230 +0 -0.0094
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0729 +0.0026 +0 -0.0028
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1157 -0.0177 +0 +0.0034
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1266 -0.0076 +0 +0.0022
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0684 +0.0026 +0 -0.0022
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1299 +0.0033 +0 +0.0005
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2024 +0.0457 +0 -0.0466
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0725 -0.0061 +0 +0.0150
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.3729 -0.0364 +0 -0.0491
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0572 -0.0059 +0 -0.0015
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0313 +0.0045 +0 -0.0033
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0738 -0.0018 +0 -0.0003
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.2330 -0.0276 +0 +0.0270
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0741 +0.0043 +0 -0.0017
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.5641 -0.1098 +0 +0.1429
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 19.4000 -4.6700 -3.4000 -0.2500 -19.4017% -14.9123% -1.2723%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 8.7400 -4.0100 -4.9400 +0.1700 -31.4510% -36.1111% +1.9837%
MTAC_3P_Standard 12.3100 13.0600 10.2700 8.9800 -3.3300 -4.0800 -1.2900 -27.0512% -31.2404% -12.5609%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 3.9800 -1.5100 -0.0800 -27.5046% -1.9704%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.1300 -1.2500 -0.5900 -0.0200 -23.2342% -12.5000% -0.4819%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 4.0400 -1.3900 -1.6100 +0.0200 -25.5985% -28.4956% +0.4975%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.1700 -1.3800 -0.1300 -0.1200 -24.8649% -3.0233% -2.7972%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 18.9300 -8.7300 -4.7900 -1.3900 -31.5618% -20.1939% -6.8406%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000 3.9700 -1.8200 -1.9300 -31.4335% -32.7119%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7000 -0.8200 -2.4100 -0.0600 -18.1416% -39.4435% -1.5957%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.5200 -2.2200 -0.0100 -0.0100 -38.6760% -0.2833% -0.2833%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.1600 -1.9100 -0.4700 -0.2800 -27.0156% -8.3481% -5.1471%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200 5.8100 -1.7800 -2.5500 -0.1100 -23.4519% -30.5024% -1.8581%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 4.8600 -2.5200 -0.0300 +0.0700 -34.1463% -0.6135% +1.4614%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.4200 -2.0300 -0.7700 -0.2400 -31.4729% -14.8362% -5.1502%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.6700 -1.0700 +0.1600 +0.2000 -22.5738% +4.5584% +5.7637%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4400 -1.2100 -0.3900 -0.0200 -26.0215% -10.1828% -0.5780%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3100 -0.8600 -0.0800 +0.0400 -20.6235% -2.3599% +1.2232%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.4800 -1.8000 -0.0100 -0.0600 -34.0909% -0.2865% -1.6949%
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300 3.4600 -1.2700 -26.8499%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.4200 -1.2300 -0.0100 -0.0900 -26.4516% -0.2915% -2.5641%
SCP_Astral_MBR 9.0400 5.7900 -3.2500 -35.9513%
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 4.3300 +0.0200 -1.4100 +0.4640% -24.5645%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 29.1600 +0.1600 -0.0300 +4.4100 +0.5517% -0.1028% +17.8182%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 27.5500 +0.4400 -0.7600 +5.4800 +1.6230% -2.6846% +24.8301%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png