Regression Metrics eFDR Plots

Regression Metrics Report

Versions: v0.6.4, develop, current

Metric: identification.precursors.total

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop	% current vs v0.6.4	% current vs develop
APMS_Astral			7770128
KEAP1KO_Eclipse			1311411
MTAC_3P_Alternating			616475
MTAC_3P_Standard			623500
MTAC_Yeast_Alternating_3min			137143
MTAC_Yeast_Alternating_5min			156487
MTAC_Yeast_Standard_3min			139534
MTAC_Yeast_Standard_5min			158917
Olsen_Astral_3P			3760070
Olsen_Exploris_3P			1155533
SCIEX_3P			749418
SCP_Astral_1000pg_12ms			41855
SCP_Astral_1000pg_24ms			42339
SCP_Astral_1000pg_3ms			23115
SCP_Astral_1000pg_6ms			17553
SCP_Astral_10ng_12ms			102934
SCP_Astral_10ng_24ms			72805
SCP_Astral_10ng_6ms			117282
SCP_Astral_10ng_ms			106497
SCP_Astral_250pg_12ms			10806
SCP_Astral_250pg_24ms			15433
SCP_Astral_250pg_3ms			2032
SCP_Astral_250pg_6ms			4783
SCP_Astral_500pg_12ms			21895
SCP_Astral_500pg_24ms			26143
SCP_Astral_500pg_6ms			11474
SCP_Astral_MBR			93648
Seer_Astral_45			3122633
Seer_Astral_single			56522
YEAST_KO_Astral			20380959
EWZ_2P_MBR_Exploris			1805248
EWZ_2P_noMBR_Exploris			1770759

Metric: identification.precursors.unique

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop	% current vs v0.6.4	% current vs develop
APMS_Astral			430621
KEAP1KO_Eclipse			133648
MTAC_3P_Alternating			117420
MTAC_3P_Standard			118733
MTAC_Yeast_Alternating_3min			48709
MTAC_Yeast_Alternating_5min			55028
MTAC_Yeast_Standard_3min			49787
MTAC_Yeast_Standard_5min			56078
Olsen_Astral_3P			231187
Olsen_Exploris_3P			58902
SCIEX_3P			93832
SCP_Astral_1000pg_12ms			15016
SCP_Astral_1000pg_24ms			15025
SCP_Astral_1000pg_3ms			9376
SCP_Astral_1000pg_6ms			9259
SCP_Astral_10ng_12ms			36293
SCP_Astral_10ng_24ms			25531
SCP_Astral_10ng_6ms			41556
SCP_Astral_10ng_ms			37676
SCP_Astral_250pg_12ms			3949
SCP_Astral_250pg_24ms			5611
SCP_Astral_250pg_3ms			721
SCP_Astral_250pg_6ms			1738
SCP_Astral_500pg_12ms			7972
SCP_Astral_500pg_24ms			9342
SCP_Astral_500pg_6ms			4155
SCP_Astral_MBR			25035
Seer_Astral_45			89971
Seer_Astral_single			56522
YEAST_KO_Astral			87613
EWZ_2P_MBR_Exploris			56121
EWZ_2P_noMBR_Exploris			56321

Metric: identification.protein_groups.total

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop	% current vs v0.6.4	% current vs develop
APMS_Astral			723191
KEAP1KO_Eclipse			92814
MTAC_3P_Alternating			64043
MTAC_3P_Standard			64591
MTAC_Yeast_Alternating_3min			12100
MTAC_Yeast_Alternating_5min			12489
MTAC_Yeast_Standard_3min			12051
MTAC_Yeast_Standard_5min			12451
Olsen_Astral_3P			245754
Olsen_Exploris_3P			153802
SCIEX_3P			74209
SCP_Astral_1000pg_12ms			9538
SCP_Astral_1000pg_24ms			9857
SCP_Astral_1000pg_3ms			6084
SCP_Astral_1000pg_6ms			4588
SCP_Astral_10ng_12ms			16202
SCP_Astral_10ng_24ms			13697
SCP_Astral_10ng_6ms			17179
SCP_Astral_10ng_ms			16276
SCP_Astral_250pg_12ms			3913
SCP_Astral_250pg_24ms			4603
SCP_Astral_250pg_3ms			22
SCP_Astral_250pg_6ms			2080
SCP_Astral_500pg_12ms			6346
SCP_Astral_500pg_24ms			6729
SCP_Astral_500pg_6ms			4007
SCP_Astral_MBR			20214
Seer_Astral_45			241502
Seer_Astral_single			4662
YEAST_KO_Astral			1389752
EWZ_2P_MBR_Exploris			245804
EWZ_2P_noMBR_Exploris			245406

Metric: identification.protein_groups.unique

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop	% current vs v0.6.4	% current vs develop
APMS_Astral			28560
KEAP1KO_Eclipse			8174
MTAC_3P_Alternating			11494
MTAC_3P_Standard			11609
MTAC_Yeast_Alternating_3min			4135
MTAC_Yeast_Alternating_5min			4263
MTAC_Yeast_Standard_3min			4129
MTAC_Yeast_Standard_5min			4234
Olsen_Astral_3P			14399
Olsen_Exploris_3P			7623
SCIEX_3P			9081
SCP_Astral_1000pg_12ms			3397
SCP_Astral_1000pg_24ms			3466
SCP_Astral_1000pg_3ms			2396
SCP_Astral_1000pg_6ms			2436
SCP_Astral_10ng_12ms			5627
SCP_Astral_10ng_24ms			4754
SCP_Astral_10ng_6ms			5950
SCP_Astral_10ng_ms			5655
SCP_Astral_250pg_12ms			1424
SCP_Astral_250pg_24ms			1660
SCP_Astral_250pg_3ms			8
SCP_Astral_250pg_6ms			756
SCP_Astral_500pg_12ms			2275
SCP_Astral_500pg_24ms			2388
SCP_Astral_500pg_6ms			1447
SCP_Astral_MBR			4754
Seer_Astral_45			6299
Seer_Astral_single			4662
YEAST_KO_Astral			4780
EWZ_2P_MBR_Exploris			7038
EWZ_2P_noMBR_Exploris			7115

Metric: entrapment.summaries.global_precursors.difference

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment			-0.0003
MTAC_3P_Alternating_Entrapment			-0.0001
MTAC_3P_Standard_Entrapment			0.0002
MTAC_Yeast_Alternating_3min_Entrapment			-0.0020
MTAC_Yeast_Alternating_5min_Entrapment			-0.0013
MTAC_Yeast_Standard_3min_Entrapment			-0.0013
MTAC_Yeast_Standard_5min_Entrapment			-0.0020
Olsen_Astral_3P_Entrapment			-0.0011
Olsen_Exploris_3P_Entrapment			0.0002
SCP_Astral_1000pg_12ms_Entrapment			-0.0016
SCP_Astral_1000pg_24ms_Entrapment			-0.0033
SCP_Astral_1000pg_3ms_Entrapment			-0.0048
SCP_Astral_1000pg_6ms_Entrapment			-0.0011
SCP_Astral_10ng_12ms_Entrapment			-0.0023
SCP_Astral_10ng_24ms_Entrapment			0.0009
SCP_Astral_10ng_3ms_Entrapment			-0.0027
SCP_Astral_10ng_6ms_Entrapment			-0.0003
SCP_Astral_250pg_12ms_Entrapment			-0.0040
SCP_Astral_250pg_24ms_Entrapment			-0.0012
SCP_Astral_500pg_12ms_Entrapment			-0.0020
SCP_Astral_500pg_3ms_Entrapment			-0.0013
YEAST_KO_Astral_Entrapment			-0.0023

Metric: entrapment.summaries.global_proteins.difference

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment			-0.0031
MTAC_3P_Alternating_Entrapment			-0.0006
MTAC_3P_Standard_Entrapment			-0.0022
MTAC_Yeast_Alternating_3min_Entrapment			-0.0050
MTAC_Yeast_Alternating_5min_Entrapment			-0.0038
MTAC_Yeast_Standard_3min_Entrapment			-0.0050
MTAC_Yeast_Standard_5min_Entrapment			-0.0045
Olsen_Astral_3P_Entrapment			-0.0034
Olsen_Exploris_3P_Entrapment			0.0002
SCP_Astral_1000pg_12ms_Entrapment			-0.0046
SCP_Astral_1000pg_24ms_Entrapment			-0.0058
SCP_Astral_1000pg_3ms_Entrapment			-0.0059
SCP_Astral_1000pg_6ms_Entrapment			-0.0049
SCP_Astral_10ng_12ms_Entrapment			-0.0049
SCP_Astral_10ng_24ms_Entrapment			-0.0023
SCP_Astral_10ng_3ms_Entrapment			-0.0073
SCP_Astral_10ng_6ms_Entrapment			-0.0023
SCP_Astral_250pg_12ms_Entrapment			-0.0076
SCP_Astral_250pg_24ms_Entrapment			-0.0042
SCP_Astral_250pg_3ms_Entrapment			0
SCP_Astral_250pg_6ms_Entrapment			-0.0067
SCP_Astral_500pg_12ms_Entrapment			-0.0054
SCP_Astral_500pg_3ms_Entrapment			0.0071
YEAST_KO_Astral_Entrapment			-0.0044

Metric: entrapment.summaries.precursors.difference

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment			-0.0004
MTAC_3P_Alternating_Entrapment			0.0003
MTAC_3P_Standard_Entrapment			0.0001
MTAC_Yeast_Alternating_3min_Entrapment			-0.0013
MTAC_Yeast_Alternating_5min_Entrapment			-0.0008
MTAC_Yeast_Standard_3min_Entrapment			-0.0007
MTAC_Yeast_Standard_5min_Entrapment			-0.0010
Olsen_Astral_3P_Entrapment			-0.0004
Olsen_Exploris_3P_Entrapment			0.0005
SCP_Astral_1000pg_12ms_Entrapment			-0.0013
SCP_Astral_1000pg_24ms_Entrapment			-0.0028
SCP_Astral_1000pg_3ms_Entrapment			-0.0029
SCP_Astral_1000pg_6ms_Entrapment			-0.0006
SCP_Astral_10ng_12ms_Entrapment			-0.0012
SCP_Astral_10ng_24ms_Entrapment			0.0004
SCP_Astral_10ng_3ms_Entrapment			-0.0020
SCP_Astral_10ng_6ms_Entrapment			0.0002
SCP_Astral_250pg_12ms_Entrapment			-0.0027
SCP_Astral_250pg_24ms_Entrapment			-0.0008
SCP_Astral_500pg_12ms_Entrapment			-0.0012
SCP_Astral_500pg_3ms_Entrapment			0.0019
YEAST_KO_Astral_Entrapment			-0.0007

Metric: entrapment.summaries.proteins.difference

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment			-0.0019
MTAC_3P_Alternating_Entrapment			0.0001
MTAC_3P_Standard_Entrapment			-0.0012
MTAC_Yeast_Alternating_3min_Entrapment			-0.0030
MTAC_Yeast_Alternating_5min_Entrapment			-0.0021
MTAC_Yeast_Standard_3min_Entrapment			-0.0032
MTAC_Yeast_Standard_5min_Entrapment			-0.0027
Olsen_Astral_3P_Entrapment			-0.0024
Olsen_Exploris_3P_Entrapment			0.0005
SCP_Astral_1000pg_12ms_Entrapment			-0.0032
SCP_Astral_1000pg_24ms_Entrapment			-0.0056
SCP_Astral_1000pg_3ms_Entrapment			-0.0033
SCP_Astral_1000pg_6ms_Entrapment			-0.0035
SCP_Astral_10ng_12ms_Entrapment			-0.0032
SCP_Astral_10ng_24ms_Entrapment			-0.0014
SCP_Astral_10ng_3ms_Entrapment			-0.0046
SCP_Astral_10ng_6ms_Entrapment			-0.0030
SCP_Astral_250pg_12ms_Entrapment			-0.0041
SCP_Astral_250pg_24ms_Entrapment			-0.0032
SCP_Astral_250pg_3ms_Entrapment			-0.0082
SCP_Astral_250pg_6ms_Entrapment			-0.0068
SCP_Astral_500pg_12ms_Entrapment			-0.0040
SCP_Astral_500pg_3ms_Entrapment			0.0066
YEAST_KO_Astral_Entrapment			-0.0025

Metric: ftr.precursors.false_transfer_rate

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris			0.0067

Metric: ftr.protein_groups.false_transfer_rate

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
EWZ_2P_MBR_Exploris			0.4086

keap1.precursors

Filter:

Dataset	Gene	Run	current
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_1	1
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_2	1
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_3	0
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_1	13
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_2	13
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_3	13
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_1	1
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_2	1
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_3	1
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_1	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_2	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_3	0

keap1.protein_groups

Filter:

Dataset	Gene	Run	current
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_1	0
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_2	0
KEAP1KO_Eclipse	KEAP1	KEAP1_KO_3	0
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_1	1
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_2	1
KEAP1KO_Eclipse	KEAP1	KEAP1_WT_3	1
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_1	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_2	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_KO_3	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_1	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_2	0
KEAP1KO_Eclipse	NFE2L2	KEAP1_WT_3	0

Metric: cv.precursors.median_cv

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
MTAC_3P_Alternating			0.1423
MTAC_3P_Standard			0.1363
MTAC_Yeast_Alternating_3min			0.1456
MTAC_Yeast_Alternating_5min			0.1408
MTAC_Yeast_Standard_3min			0.1640
MTAC_Yeast_Standard_5min			0.1370
Olsen_Astral_3P			0.0884
Olsen_Exploris_3P			0.1500
SCIEX_3P			0.1281

Metric: cv.protein_groups.median_cv

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop
MTAC_3P_Alternating			0.0738
MTAC_3P_Standard			0.0704
MTAC_Yeast_Alternating_3min			0.0670
MTAC_Yeast_Alternating_5min			0.0596
MTAC_Yeast_Standard_3min			0.0765
MTAC_Yeast_Standard_5min			0.0567
Olsen_Astral_3P			0.0373
Olsen_Exploris_3P			0.1020
SCIEX_3P			0.0834

fold_change.error.precursors

Filter:

Dataset	Species	Condition	current
MTAC_3P_Alternating	ecoli	A vs B	-0.0690
MTAC_3P_Alternating	human	A vs B	-0.0352
MTAC_3P_Alternating	yeast	A vs B	0.0043
MTAC_3P_Standard	ecoli	A vs B	-0.1260
MTAC_3P_Standard	human	A vs B	-0.0730
MTAC_3P_Standard	yeast	A vs B	-0.0254
Olsen_Astral_3P	ecoli	B vs A	-0.0684
Olsen_Astral_3P	ecoli	D vs C	-0.2131
Olsen_Astral_3P	ecoli	F vs E	-0.0124
Olsen_Astral_3P	human	B vs A	-0.0104
Olsen_Astral_3P	human	D vs C	-0.3340
Olsen_Astral_3P	human	F vs E	0.0752
Olsen_Astral_3P	yeast	B vs A	0.0863
Olsen_Astral_3P	yeast	D vs C	-0.2274
Olsen_Astral_3P	yeast	F vs E	0.2202
Olsen_Exploris_3P	ecoli	B vs A	0.2234
Olsen_Exploris_3P	ecoli	D vs C	-0.0755
Olsen_Exploris_3P	ecoli	F vs E	0.2741
Olsen_Exploris_3P	human	B vs A	0.1004
Olsen_Exploris_3P	human	D vs C	-0.0539
Olsen_Exploris_3P	human	F vs E	0.2053
Olsen_Exploris_3P	yeast	B vs A	0.0464
Olsen_Exploris_3P	yeast	D vs C	-0.1118
Olsen_Exploris_3P	yeast	F vs E	-0.0906
SCIEX_3P	ecoli	B vs A	-0.0718
SCIEX_3P	ecoli	C vs A	-0.0539
SCIEX_3P	ecoli	C vs B	0.0095
SCIEX_3P	human	B vs A	-0.0452
SCIEX_3P	human	C vs A	-0.0564
SCIEX_3P	human	C vs B	-0.0152
SCIEX_3P	yeast	B vs A	-0.0194
SCIEX_3P	yeast	C vs A	-0.0712
SCIEX_3P	yeast	C vs B	-0.0433

fold_change.error.protein_groups

Filter:

Dataset	Species	Condition	current
MTAC_3P_Alternating	ecoli	A vs B	-0.0665
MTAC_3P_Alternating	human	A vs B	-0.0368
MTAC_3P_Alternating	yeast	A vs B	0.0064
MTAC_3P_Standard	ecoli	A vs B	-0.1245
MTAC_3P_Standard	human	A vs B	-0.0708
MTAC_3P_Standard	yeast	A vs B	-0.0248
Olsen_Astral_3P	ecoli	B vs A	-0.0651
Olsen_Astral_3P	ecoli	D vs C	-0.1660
Olsen_Astral_3P	ecoli	F vs E	0.0256
Olsen_Astral_3P	human	B vs A	-0.0219
Olsen_Astral_3P	human	D vs C	-0.3003
Olsen_Astral_3P	human	F vs E	0.0700
Olsen_Astral_3P	yeast	B vs A	0.0660
Olsen_Astral_3P	yeast	D vs C	-0.1997
Olsen_Astral_3P	yeast	F vs E	0.1963
Olsen_Exploris_3P	ecoli	B vs A	0.2133
Olsen_Exploris_3P	ecoli	D vs C	-0.0743
Olsen_Exploris_3P	ecoli	F vs E	0.3042
Olsen_Exploris_3P	human	B vs A	0.0878
Olsen_Exploris_3P	human	D vs C	-0.0508
Olsen_Exploris_3P	human	F vs E	0.2026
Olsen_Exploris_3P	yeast	B vs A	0.0386
Olsen_Exploris_3P	yeast	D vs C	-0.1163
Olsen_Exploris_3P	yeast	F vs E	-0.1043
SCIEX_3P	ecoli	B vs A	-0.0613
SCIEX_3P	ecoli	C vs A	-0.0459
SCIEX_3P	ecoli	C vs B	0.0153
SCIEX_3P	human	B vs A	-0.0450
SCIEX_3P	human	C vs A	-0.0580
SCIEX_3P	human	C vs B	-0.0140
SCIEX_3P	yeast	B vs A	-0.0233
SCIEX_3P	yeast	C vs A	-0.0731
SCIEX_3P	yeast	C vs B	-0.0500

fold_change.variance.precursors

Filter:

Dataset	Species	Condition	current
MTAC_3P_Alternating	ecoli	A vs B	0.2986
MTAC_3P_Alternating	human	A vs B	0.2126
MTAC_3P_Alternating	yeast	A vs B	0.2707
MTAC_3P_Standard	ecoli	A vs B	0.3085
MTAC_3P_Standard	human	A vs B	0.2230
MTAC_3P_Standard	yeast	A vs B	0.2741
Olsen_Astral_3P	ecoli	B vs A	0.5988
Olsen_Astral_3P	ecoli	D vs C	0.3951
Olsen_Astral_3P	ecoli	F vs E	1.3605
Olsen_Astral_3P	human	B vs A	0.2539
Olsen_Astral_3P	human	D vs C	0.3416
Olsen_Astral_3P	human	F vs E	0.3584
Olsen_Astral_3P	yeast	B vs A	0.3308
Olsen_Astral_3P	yeast	D vs C	0.2849
Olsen_Astral_3P	yeast	F vs E	0.5563
Olsen_Exploris_3P	ecoli	B vs A	0.6122
Olsen_Exploris_3P	ecoli	D vs C	0.1567
Olsen_Exploris_3P	ecoli	F vs E	0.8085
Olsen_Exploris_3P	human	B vs A	0.3388
Olsen_Exploris_3P	human	D vs C	0.1750
Olsen_Exploris_3P	human	F vs E	0.3305
Olsen_Exploris_3P	yeast	B vs A	0.5961
Olsen_Exploris_3P	yeast	D vs C	0.2462
Olsen_Exploris_3P	yeast	F vs E	1.1525
SCIEX_3P	ecoli	B vs A	0.5347
SCIEX_3P	ecoli	C vs A	0.5991
SCIEX_3P	ecoli	C vs B	0.1463
SCIEX_3P	human	B vs A	0.2132
SCIEX_3P	human	C vs A	0.2455
SCIEX_3P	human	C vs B	0.1985
SCIEX_3P	yeast	B vs A	0.2465
SCIEX_3P	yeast	C vs A	0.6150
SCIEX_3P	yeast	C vs B	0.5513

fold_change.variance.protein_groups

Filter:

Dataset	Species	Condition	current
MTAC_3P_Alternating	ecoli	A vs B	0.1525
MTAC_3P_Alternating	human	A vs B	0.0757
MTAC_3P_Alternating	yeast	A vs B	0.1123
MTAC_3P_Standard	ecoli	A vs B	0.1244
MTAC_3P_Standard	human	A vs B	0.0706
MTAC_3P_Standard	yeast	A vs B	0.1294
Olsen_Astral_3P	ecoli	B vs A	0.2322
Olsen_Astral_3P	ecoli	D vs C	0.1342
Olsen_Astral_3P	ecoli	F vs E	0.4293
Olsen_Astral_3P	human	B vs A	0.0445
Olsen_Astral_3P	human	D vs C	0.0649
Olsen_Astral_3P	human	F vs E	0.0597
Olsen_Astral_3P	yeast	B vs A	0.0533
Olsen_Astral_3P	yeast	D vs C	0.0505
Olsen_Astral_3P	yeast	F vs E	0.1287
Olsen_Exploris_3P	ecoli	B vs A	0.2490
Olsen_Exploris_3P	ecoli	D vs C	0.0575
Olsen_Exploris_3P	ecoli	F vs E	0.4220
Olsen_Exploris_3P	human	B vs A	0.0587
Olsen_Exploris_3P	human	D vs C	0.0346
Olsen_Exploris_3P	human	F vs E	0.0741
Olsen_Exploris_3P	yeast	B vs A	0.2060
Olsen_Exploris_3P	yeast	D vs C	0.0758
Olsen_Exploris_3P	yeast	F vs E	0.4212
SCIEX_3P	ecoli	B vs A	0.3229
SCIEX_3P	ecoli	C vs A	0.3082
SCIEX_3P	ecoli	C vs B	0.0650
SCIEX_3P	human	B vs A	0.0604
SCIEX_3P	human	C vs A	0.0655
SCIEX_3P	human	C vs B	0.0615
SCIEX_3P	yeast	B vs A	0.0968
SCIEX_3P	yeast	C vs A	0.3167
SCIEX_3P	yeast	C vs B	0.2947

Metric: runtime

Filter:

Dataset	v0.6.4	develop	current	Δ current vs v0.6.4	Δ current vs develop	% current vs v0.6.4	% current vs develop
APMS_Astral			257.4800
KEAP1KO_Eclipse			19.0600
MTAC_3P_Alternating			9.1900
MTAC_3P_Standard			9.8300
MTAC_Yeast_Alternating_3min			4.4200
MTAC_Yeast_Alternating_5min			4.7600
MTAC_Yeast_Standard_3min			4.4600
MTAC_Yeast_Standard_5min			4.6300
Olsen_Astral_3P			62.0500
Olsen_Exploris_3P			19.5000
SCIEX_3P			26.8700
SCP_Astral_1000pg_12ms			4.4800
SCP_Astral_1000pg_3ms			3.9000
SCP_Astral_1000pg_6ms			3.7000
SCP_Astral_10ng_12ms			5.6900
SCP_Astral_10ng_24ms			6.1100
SCP_Astral_10ng_6ms			4.7900
SCP_Astral_10ng_ms			5.1200
SCP_Astral_250pg_3ms			3.6800
SCP_Astral_250pg_6ms			3.4300
SCP_Astral_500pg_12ms			3.5600
SCP_Astral_500pg_24ms			4.0300
SCP_Astral_500pg_6ms			3.7500
Seer_Astral_45			57.9100
Seer_Astral_single			4.4600
YEAST_KO_Astral			183.3500
EWZ_2P_MBR_Exploris			24.2500
EWZ_2P_noMBR_Exploris			22.3200

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

Olsen_Astral_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png

YEAST_KO_Astral_Entrapment

efdr_comparison_MBR_boosted_global_prob.png

efdr_comparison_MBR_boosted_prec_prob.png

efdr_comparison_global_pg_score.png

efdr_comparison_pg_score.png