Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1293931 +197437 -17480 -17480 +18.0062% -1.3329% -1.3329%
MTAC_3P_Alternating 586322 616475 616475 615581 +29259 -894 -894 +4.9903% -0.1450% -0.1450%
MTAC_3P_Standard 596590 623500 623500 623072 +26482 -428 -428 +4.4389% -0.0686% -0.0686%
MTAC_Yeast_Alternating_3min 137143 137143 137391 +248 +248 +0.1808% +0.1808%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156728 +1087 -5 +166 +0.6984% -0.0032% +0.1060%
MTAC_Yeast_Standard_3min 138509 139777 139662 140279 +1770 +502 +617 +1.2779% +0.3591% +0.4418%
MTAC_Yeast_Standard_5min 158962 158983 158983 159850 +888 +867 +867 +0.5586% +0.5453% +0.5453%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1130798 +108062 -24735 -24735 +10.5660% -2.1406% -2.1406%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 40325 -557 -1530 -1530 -1.3625% -3.6555% -3.6555%
SCP_Astral_1000pg_24ms 41069 42339 42344 37464 -3605 -4875 -4880 -8.7779% -11.5142% -11.5247%
SCP_Astral_1000pg_3ms 8740 23115 23115 23025 +14285 -90 -90 +163.4439% -0.3894% -0.3894%
SCP_Astral_1000pg_6ms 16935 17553 17553 18318 +1383 +765 +765 +8.1665% +4.3582% +4.3582%
SCP_Astral_10ng_12ms 99908 102934 102934 100480 +572 -2454 -2454 +0.5725% -2.3841% -2.3841%
SCP_Astral_10ng_24ms 71098 72525 72805 68590 -2508 -3935 -4215 -3.5275% -5.4257% -5.7894%
SCP_Astral_10ng_6ms 115157 117282 117413 115247 +90 -2035 -2166 +0.0782% -1.7351% -1.8448%
SCP_Astral_10ng_ms 105704 106497 106497 105798 +94 -699 -699 +0.0889% -0.6564% -0.6564%
SCP_Astral_250pg_12ms 10194 10806 10806 11067 +873 +261 +261 +8.5639% +2.4153% +2.4153%
SCP_Astral_250pg_24ms 14807 15433 15433 13626 -1181 -1807 -1807 -7.9760% -11.7087% -11.7087%
SCP_Astral_250pg_3ms 1261 2032 2032 2483 +1222 +451 +451 +96.9072% +22.1949% +22.1949%
SCP_Astral_250pg_6ms 1436 4783 4783 5619 +4183 +836 +836 +291.2953% +17.4786% +17.4786%
SCP_Astral_500pg_12ms 21710 21895 21895 22000 +290 +105 +105 +1.3358% +0.4796% +0.4796%
SCP_Astral_500pg_24ms 25860 26143 26143 22977 -2883 -3166 -3166 -11.1485% -12.1103% -12.1103%
SCP_Astral_500pg_3ms 3484 6931 +3447 +98.9380%
SCP_Astral_500pg_6ms 10699 11474 11474 12833 +2134 +1359 +1359 +19.9458% +11.8442% +11.8442%
SCP_Astral_MBR 92167 93648 93648 92832 +665 -816 -816 +0.7215% -0.8713% -0.8713%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 53981 -2541 -2541 -4.4956% -4.4956%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1808848 +145854 +3600 +3600 +8.7706% +0.1994% +0.1994%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1773948 +165042 +3189 +3189 +10.2580% +0.1801% +0.1801%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 134776 +23272 +1128 +1128 +20.8710% +0.8440% +0.8440%
MTAC_3P_Alternating 108267 117420 117420 117299 +9032 -121 -121 +8.3423% -0.1030% -0.1030%
MTAC_3P_Standard 110265 118733 118733 118423 +8158 -310 -310 +7.3985% -0.2611% -0.2611%
MTAC_Yeast_Alternating_3min 48709 48709 49106 +397 +397 +0.8150% +0.8150%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55448 +1479 +78 +251 +2.7405% +0.1409% +0.4547%
MTAC_Yeast_Standard_3min 48621 50039 49836 50427 +1806 +388 +591 +3.7144% +0.7754% +1.1859%
MTAC_Yeast_Standard_5min 55060 56122 56122 56706 +1646 +584 +584 +2.9895% +1.0406% +1.0406%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 56447 +5175 -2455 -2455 +10.0932% -4.1679% -4.1679%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 14378 -62 -638 -638 -0.4294% -4.2488% -4.2488%
SCP_Astral_1000pg_24ms 14483 15025 15026 13067 -1416 -1958 -1959 -9.7770% -13.0316% -13.0374%
SCP_Astral_1000pg_3ms 8740 9376 9376 9303 +563 -73 -73 +6.4416% -0.7786% -0.7786%
SCP_Astral_1000pg_6ms 8898 9259 9259 9694 +796 +435 +435 +8.9458% +4.6981% +4.6981%
SCP_Astral_10ng_12ms 34865 36293 36293 34881 +16 -1412 -1412 +0.0459% -3.8906% -3.8906%
SCP_Astral_10ng_24ms 24649 25391 25531 23740 -909 -1651 -1791 -3.6878% -6.5023% -7.0150%
SCP_Astral_10ng_6ms 40156 41556 41511 40353 +197 -1203 -1158 +0.4906% -2.8949% -2.7896%
SCP_Astral_10ng_ms 36688 37676 37676 37533 +845 -143 -143 +2.3032% -0.3796% -0.3796%
SCP_Astral_250pg_12ms 3666 3949 3949 4085 +419 +136 +136 +11.4294% +3.4439% +3.4439%
SCP_Astral_250pg_24ms 5299 5611 5611 4795 -504 -816 -816 -9.5112% -14.5429% -14.5429%
SCP_Astral_250pg_3ms 675 721 721 931 +256 +210 +210 +37.9259% +29.1262% +29.1262%
SCP_Astral_250pg_6ms 1436 1738 1738 2116 +680 +378 +378 +47.3538% +21.7491% +21.7491%
SCP_Astral_500pg_12ms 7794 7972 7972 8023 +229 +51 +51 +2.9382% +0.6397% +0.6397%
SCP_Astral_500pg_24ms 9158 9342 9342 8079 -1079 -1263 -1263 -11.7820% -13.5196% -13.5196%
SCP_Astral_500pg_3ms 1846 2629 +783 +42.4160%
SCP_Astral_500pg_6ms 3874 4155 4155 4707 +833 +552 +552 +21.5023% +13.2852% +13.2852%
SCP_Astral_MBR 24110 25035 25035 23892 -218 -1143 -1143 -0.9042% -4.5656% -4.5656%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 53981 -2541 -2541 -4.4956% -4.4956%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 56041 +5341 -80 -80 +10.5345% -0.1425% -0.1425%
EWZ_2P_noMBR_Exploris 50591 56321 56321 56298 +5707 -23 -23 +11.2807% -0.0408% -0.0408%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 92163 +4243 -651 -651 +4.8260% -0.7014% -0.7014%
MTAC_3P_Alternating 63773 64043 64043 64046 +273 +3 +3 +0.4281% +0.0047% +0.0047%
MTAC_3P_Standard 64317 64591 64591 64556 +239 -35 -35 +0.3716% -0.0542% -0.0542%
MTAC_Yeast_Alternating_3min 12100 12100 12097 -3 -3 -0.0248% -0.0248%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12427 -5 +16 +14 -0.0402% +0.1289% +0.1128%
MTAC_Yeast_Standard_3min 12008 12020 12034 12098 +90 +78 +64 +0.7495% +0.6489% +0.5318%
MTAC_Yeast_Standard_5min 12561 12508 12508 12512 -49 +4 +4 -0.3901% +0.0320% +0.0320%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 152838 +6614 -964 -964 +4.5232% -0.6268% -0.6268%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 9427 +264 -111 -111 +2.8812% -1.1638% -1.1638%
SCP_Astral_1000pg_24ms 9298 9857 9852 8768 -530 -1089 -1084 -5.7002% -11.0480% -11.0028%
SCP_Astral_1000pg_3ms 2450 6084 6084 6348 +3898 +264 +264 +159.1020% +4.3393% +4.3393%
SCP_Astral_1000pg_6ms 4703 4588 4588 4974 +271 +386 +386 +5.7623% +8.4133% +8.4133%
SCP_Astral_10ng_12ms 16190 16202 16202 16254 +64 +52 +52 +0.3953% +0.3209% +0.3209%
SCP_Astral_10ng_24ms 13599 13792 13697 13558 -41 -234 -139 -0.3015% -1.6966% -1.0148%
SCP_Astral_10ng_6ms 17017 17179 17127 17045 +28 -134 -82 +0.1645% -0.7800% -0.4788%
SCP_Astral_10ng_ms 16252 16276 16276 16113 -139 -163 -163 -0.8553% -1.0015% -1.0015%
SCP_Astral_250pg_12ms 3647 3913 3913 3698 +51 -215 -215 +1.3984% -5.4945% -5.4945%
SCP_Astral_250pg_24ms 4300 4603 4603 4554 +254 -49 -49 +5.9070% -1.0645% -1.0645%
SCP_Astral_250pg_3ms 576 22 22 984 +408 +962 +962 +70.8333% +4372.7273% +4372.7273%
SCP_Astral_250pg_6ms 637 2080 2080 2076 +1439 -4 -4 +225.9027% -0.1923% -0.1923%
SCP_Astral_500pg_12ms 6245 6346 6346 6318 +73 -28 -28 +1.1689% -0.4412% -0.4412%
SCP_Astral_500pg_24ms 6722 6729 6729 6645 -77 -84 -84 -1.1455% -1.2483% -1.2483%
SCP_Astral_500pg_3ms 982 2483 +1501 +152.8513%
SCP_Astral_500pg_6ms 3708 4007 4007 3981 +273 -26 -26 +7.3625% -0.6489% -0.6489%
SCP_Astral_MBR 20165 20214 20214 20527 +362 +313 +313 +1.7952% +1.5484% +1.5484%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4631 -31 -31 -0.6650% -0.6650%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 247113 +7629 +1309 +1309 +3.1856% +0.5325% +0.5325%
EWZ_2P_noMBR_Exploris 235990 245406 245406 245450 +9460 +44 +44 +4.0086% +0.0179% +0.0179%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8213 +368 +39 +39 +4.6909% +0.4771% +0.4771%
MTAC_3P_Alternating 11361 11494 11494 11491 +130 -3 -3 +1.1443% -0.0261% -0.0261%
MTAC_3P_Standard 11473 11609 11609 11591 +118 -18 -18 +1.0285% -0.1551% -0.1551%
MTAC_Yeast_Alternating_3min 4135 4135 4149 +14 +14 +0.3386% +0.3386%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4235 +20 +6 +3 +0.4745% +0.1419% +0.0709%
MTAC_Yeast_Standard_3min 4075 4100 4113 4157 +82 +57 +44 +2.0123% +1.3902% +1.0698%
MTAC_Yeast_Standard_5min 4249 4249 4249 4257 +8 +8 +8 +0.1883% +0.1883% +0.1883%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 7449 +194 -174 -174 +2.6740% -2.2826% -2.2826%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 3374 +129 -23 -23 +3.9753% -0.6771% -0.6771%
SCP_Astral_1000pg_24ms 3254 3466 3469 3073 -181 -393 -396 -5.5624% -11.3387% -11.4154%
SCP_Astral_1000pg_3ms 2450 2396 2396 2505 +55 +109 +109 +2.2449% +4.5492% +4.5492%
SCP_Astral_1000pg_6ms 2508 2436 2436 2631 +123 +195 +195 +4.9043% +8.0049% +8.0049%
SCP_Astral_10ng_12ms 5579 5627 5627 5591 +12 -36 -36 +0.2151% -0.6398% -0.6398%
SCP_Astral_10ng_24ms 4721 4803 4754 4705 -16 -98 -49 -0.3389% -2.0404% -1.0307%
SCP_Astral_10ng_6ms 5846 5950 5930 5884 +38 -66 -46 +0.6500% -1.1092% -0.7757%
SCP_Astral_10ng_ms 5611 5655 5655 5596 -15 -59 -59 -0.2673% -1.0433% -1.0433%
SCP_Astral_250pg_12ms 1292 1424 1424 1348 +56 -76 -76 +4.3344% -5.3371% -5.3371%
SCP_Astral_250pg_24ms 1568 1660 1660 1638 +70 -22 -22 +4.4643% -1.3253% -1.3253%
SCP_Astral_250pg_3ms 307 8 8 373 +66 +365 +365 +21.4984% +4562.5000% +4562.5000%
SCP_Astral_250pg_6ms 637 756 756 767 +130 +11 +11 +20.4082% +1.4550% +1.4550%
SCP_Astral_500pg_12ms 2207 2275 2275 2285 +78 +10 +10 +3.5342% +0.4396% +0.4396%
SCP_Astral_500pg_24ms 2403 2388 2388 2356 -47 -32 -32 -1.9559% -1.3400% -1.3400%
SCP_Astral_500pg_3ms 525 933 +408 +77.7143%
SCP_Astral_500pg_6ms 1318 1447 1447 1454 +136 +7 +7 +10.3187% +0.4838% +0.4838%
SCP_Astral_MBR 4708 4754 4754 4715 +7 -39 -39 +0.1487% -0.8204% -0.8204%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4631 -31 -31 -0.6650% -0.6650%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 7085 +254 +47 +47 +3.7183% +0.6678% +0.6678%
EWZ_2P_noMBR_Exploris 6858 7115 7115 7103 +245 -12 -12 +3.5725% -0.1687% -0.1687%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0008 -0.0002 -0.0005 -0.0005
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0002 +0.0002 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 0.0002 +0.0016 +0.0000 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0021 -0.0001 -0.0001
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0012 -0.0008 +0.0000 +0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0022 -0.0003 -0.0009 -0.0009
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0016 -0.0006 +0.0004
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 -0.0010 -0.0008 -0.0012
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0031 -0.0008 -0.0015
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0027 +0.0027 +0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0019 +0.0011 +0.0018 +0.0018
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0022 -0.0020 -0.0011 -0.0011
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0027 -0.0005 -0.0004 -0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0016 +0.0005 -0.0024
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0029 -0.0005 -0.0003
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0011 -0.0003 -0.0008
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0068 -0.0029 -0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 -0.0029 -0.0027 -0.0017
SCP_Astral_250pg_6ms_Entrapment -0.0051
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 0.0000 +0.0022 +0.0020 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0032 -0.0019 -0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 0.0013 +0.0044 +0.0044
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0020 +0.0006 -0.0003
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0017 -0.0007 +0.0015 +0.0015
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0004 +0.0006 +0.0003 +0.0003
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0032 -0.0020 -0.0010 -0.0010
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0055 -0.0005 -0.0005
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0034 +0.0008 +0.0005 +0.0005
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0052 +0.0006 -0.0003 -0.0003
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0038 -0.0002 +0.0007
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0030 -0.0000 -0.0032
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0040 +0.0009 +0.0006
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0023 +0.0047 +0.0036
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0054 +0.0005 -0.0018 -0.0018
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0050 -0.0032 -0.0000 -0.0000
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0042 +0.0012 +0.0007 +0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0037 -0.0005 -0.0014
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0062 -0.0025 +0.0012
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0004 +0.0050 +0.0019
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0077 -0.0024 -0.0001
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0066 -0.0025 -0.0024
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0057 +0.0042 +0.0010 +0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0064 -0.0028 -0.0010 -0.0010
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0045 -0.0025 -0.0037
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0036 +0.0006 -0.0107
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 0.0006 +0.0051 +0.0052 +0.0052
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0028 +0.0031 -0.0009
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0007 -0.0002 -0.0003 -0.0003
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 0.0002 +0.0003 -0.0001 -0.0001
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 0.0000 +0.0009 -0.0001 -0.0001
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0013 -0.0000 -0.0000
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0007 -0.0004 +0.0000 +0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0013 -0.0004 -0.0006 -0.0006
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0012 -0.0004 -0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0004 +0.0001 -0.0008
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0026 -0.0011 -0.0013
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0022 +0.0024 +0.0006
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0015 +0.0005 +0.0007 +0.0007
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0021 -0.0023 -0.0015 -0.0015
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0016 +0.0000 -0.0004 -0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0009 +0.0004 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0020 -0.0000 +0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0005 -0.0000 -0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0039 -0.0009 -0.0013
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0028 -0.0021 -0.0020
SCP_Astral_250pg_6ms_Entrapment -0.0037
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0004 +0.0014 +0.0008 +0.0008
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0029 -0.0013 -0.0009
SCP_Astral_500pg_3ms_Entrapment 0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0004 +0.0021 +0.0021
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0016 +0.0001 -0.0002
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0010 -0.0008 +0.0009 +0.0009
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0006 -0.0005 -0.0007 -0.0007
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0012 -0.0004 +0.0000 +0.0000
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0034 -0.0004 -0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0021 +0.0016 -0.0000 -0.0000
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0030 +0.0008 +0.0002 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0025 -0.0002 +0.0002
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0019 +0.0008 -0.0024
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0027 +0.0010 +0.0005
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0023 +0.0025 +0.0032
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0030 +0.0014 -0.0014 -0.0014
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0033 -0.0008 +0.0002 +0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0038 +0.0010 -0.0005 -0.0005
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0027 +0.0005 -0.0013
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0040 -0.0019 +0.0006
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0015 +0.0024 +0.0015
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0047 -0.0008 -0.0006
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0063 -0.0049 -0.0031
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0028 +0.0072 +0.0040 +0.0040
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0028 +0.0011 +0.0012 +0.0012
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0021 -0.0002 -0.0021
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0018 +0.0014 -0.0085
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 0.0007 +0.0026 +0.0029 +0.0029
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0027 -0.0003 -0.0011
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0111 -0.0020 +0.0044 +0.0044

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0 -0.0476 -0.4086 -0.4086

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 1 +1 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 14 +4 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 +4 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 15 +3 +0 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 2 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 2 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 2 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1449 -0.0010 +0.0026 +0.0026
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1385 -0.0008 +0.0022 +0.0022
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1448 -0.0007 -0.0007
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1406 -0.0124 +0.0004 +0.0003
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1634 -0.0064 -0.0010 -0.0007
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1370 -0.0133 +0.0002 +0.0002
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1518 +0.0038 +0.0019 +0.0019
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0753 -0.0010 +0.0015 +0.0015
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0710 -0.0014 +0.0005 +0.0005
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0683 +0.0013 +0.0013
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0593 -0.0185 -0.0003 -0.0005
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0754 -0.0038 -0.0017 -0.0017
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0579 -0.0191 +0.0012 +0.0012
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1031 +0.0003 +0.0012 +0.0012
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0744 -0.0024 +0 +0.0054
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0391 -0.0079 +0 +0.0038
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 -0.0012 +0.0017 +0 -0.0031
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1239 +0.0015 +0 -0.0021
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0733 -0.0055 +0 +0.0003
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0301 -0.0083 +0 +0.0047
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2410 -0.0038 +0 +0.0176
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0711 +0.0068 +0 -0.0044
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.3044 +0.0186 +0 +0.0303
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.1003 +0.0049 +0 -0.0000
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0517 +0.0004 +0 -0.0022
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2077 +0.0054 +0 +0.0024
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0256 -0.0014 +0 -0.0208
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1100 +0.0042 +0 -0.0017
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0890 +0.0227 +0 -0.0016
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0679 +0.0011 +0 +0.0014
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0400 -0.0083 +0 +0.0032
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 -0.0055 +0.0048 +0 -0.0009
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1246 +0.0000 +0 +0.0001
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0710 -0.0064 +0 +0.0003
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0315 -0.0075 +0 +0.0068
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2164 -0.0039 +0 +0.0031
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0620 +0.0080 +0 -0.0123
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.3180 +0.0484 +0 +0.0138
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0887 +0.0037 +0 +0.0010
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0479 +0.0006 +0 -0.0029
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2075 +0.0038 +0 +0.0049
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0267 -0.0047 +0 -0.0119
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1157 +0.0068 +0 -0.0006
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.1168 +0.0509 +0 +0.0125
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2881 +0.0367 +0 -0.0106
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2181 +0.0142 +0 +0.0055
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2778 +0.0148 +0 +0.0072
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2949 +0.0404 +0 -0.0136
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2211 +0.0168 +0 -0.0019
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2731 +0.0186 +0 -0.0010
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.5962 +0.0339 +0 -0.0160
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1508 -0.0061 +0 -0.0059
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 0.9026 +0.0041 +0 +0.0941
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3335 +0.0015 +0 -0.0053
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1625 +0.0655 +0 -0.0125
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3218 +0.0280 +0 -0.0087
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.6255 -0.0228 +0 +0.0294
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2565 +0.0964 +0 +0.0103
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.1642 +0.0666 +0 +0.0117
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1427 +0.0230 +0 -0.0098
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0681 +0.0026 +0 -0.0075
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1219 -0.0177 +0 +0.0096
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1233 -0.0076 +0 -0.0011
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0705 +0.0026 +0 -0.0001
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1304 +0.0033 +0 +0.0009
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.1863 +0.0457 +0 -0.0627
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0773 -0.0061 +0 +0.0197
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.3438 -0.0364 +0 -0.0782
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0600 -0.0059 +0 +0.0013
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0355 +0.0045 +0 +0.0010
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0814 -0.0018 +0 +0.0073
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.1833 -0.0276 +0 -0.0227
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0691 +0.0043 +0 -0.0067
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.4931 -0.1098 +0 +0.0719
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 16.8000 -7.2700 -6 -2.8500 -30.2036% -26.3158% -14.5038%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 7.9500 -4.8000 -5.7300 -0.6200 -37.6471% -41.8860% -7.2345%
MTAC_3P_Standard 12.3100 13.0600 10.2700 8.1900 -4.1200 -4.8700 -2.0800 -33.4687% -37.2894% -20.2532%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 4.3200 -1.1700 +0.2600 -21.3115% +6.4039%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.1000 -1.2800 -0.6200 -0.0500 -23.7918% -13.1356% -1.2048%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 4.0200 -1.4100 -1.6300 +0 -25.9669% -28.8496% +0%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.3900 -1.1600 +0.0900 +0.1000 -20.9009% +2.0930% +2.3310%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 14.9500 -12.7100 -8.7700 -5.3700 -45.9508% -36.9730% -26.4272%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400 4.3700 -1.8900 -0.8300 -0.0700 -30.1917% -15.9615% -1.5766%
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7300 -0.7900 -2.3800 -0.0300 -17.4779% -38.9525% -0.7979%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.5100 -2.2300 -0.0200 -0.0200 -38.8502% -0.5666% -0.5666%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.4800 -1.5900 -0.1500 +0.0400 -22.4894% -2.6643% +0.7353%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 4.8500 -2.5300 -0.0400 +0.0600 -34.2818% -0.8180% +1.2526%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.2400 -2.2100 -0.9500 -0.4200 -34.2636% -18.3044% -9.0129%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.4600 -1.2800 -0.0500 -0.0100 -27.0042% -1.4245% -0.2882%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4500 -1.2000 -0.3800 -0.0100 -25.8065% -9.9217% -0.2890%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.4400 -0.7300 +0.0500 +0.1700 -17.5060% +1.4749% +5.1988%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.5100 -1.7700 +0.0200 -0.0300 -33.5227% +0.5731% -0.8475%
SCP_Astral_500pg_24ms 5.5100 3.8200
SCP_Astral_500pg_3ms 4.7300 3.4600 -1.2700 -26.8499%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.6800 -0.9700 +0.2500 +0.1700 -20.8602% +7.2886% +4.8433%
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 4.1600 -0.1500 -1.5800 -3.4803% -27.5261%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 22.3900 -6.6100 -6.8000 -2.3600 -22.7931% -23.2956% -9.5354%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 21.9700 -5.1400 -6.3400 -0.1000 -18.9598% -22.3949% -0.4531%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png