Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1338469 +241975 +27058 +27058 +22.0681% +2.0633% +2.0633%
MTAC_3P_Alternating 586322 616475 616475 606732 +20410 -9743 -9743 +3.4810% -1.5804% -1.5804%
MTAC_3P_Standard 596590 623500 623500 613482 +16892 -10018 -10018 +2.8314% -1.6067% -1.6067%
MTAC_Yeast_Alternating_3min 137143 137143 136973 -170 -170 -0.1240% -0.1240%
MTAC_Yeast_Alternating_5min 155641 156733 156562 156818 +1177 +85 +256 +0.7562% +0.0542% +0.1635%
MTAC_Yeast_Standard_3min 138509 139777 139662 139356 +847 -421 -306 +0.6115% -0.3012% -0.2191%
MTAC_Yeast_Standard_5min 158962 158983 158983 159438 +476 +455 +455 +0.2994% +0.2862% +0.2862%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1098577 +75841 -56956 -56956 +7.4155% -4.9290% -4.9290%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 36647 -4235 -5208 -5208 -10.3591% -12.4430% -12.4430%
SCP_Astral_1000pg_24ms 41069 42339 42344 33321 -7748 -9018 -9023 -18.8658% -21.2995% -21.3088%
SCP_Astral_1000pg_3ms 8740 23115 23115 23025 +14285 -90 -90 +163.4439% -0.3894% -0.3894%
SCP_Astral_1000pg_6ms 16935 17553 17553 18318 +1383 +765 +765 +8.1665% +4.3582% +4.3582%
SCP_Astral_10ng_12ms 99908 102934 102934 93878 -6030 -9056 -9056 -6.0356% -8.7979% -8.7979%
SCP_Astral_10ng_24ms 71098 72525 72805 62038 -9060 -10487 -10767 -12.7430% -14.4598% -14.7888%
SCP_Astral_10ng_6ms 115157 117282 117413 112832 -2325 -4450 -4581 -2.0190% -3.7943% -3.9016%
SCP_Astral_10ng_ms 105704 106497 106497 105712 +8 -785 -785 +0.0076% -0.7371% -0.7371%
SCP_Astral_250pg_12ms 10194 10806 10806 10835 +641 +29 +29 +6.2880% +0.2684% +0.2684%
SCP_Astral_250pg_24ms 14807 15433 15433 11996 -2811 -3437 -3437 -18.9843% -22.2705% -22.2705%
SCP_Astral_250pg_3ms 1261 2032 2032 2483 +1222 +451 +451 +96.9072% +22.1949% +22.1949%
SCP_Astral_250pg_6ms 1436 4783 4783 5619 +4183 +836 +836 +291.2953% +17.4786% +17.4786%
SCP_Astral_500pg_12ms 21710 21895 21895 20896 -814 -999 -999 -3.7494% -4.5627% -4.5627%
SCP_Astral_500pg_24ms 25860 26143 26143 20121 -5739 -6022 -6022 -22.1926% -23.0348% -23.0348%
SCP_Astral_500pg_3ms 3484 6931 +3447 +98.9380%
SCP_Astral_500pg_6ms 10699 11474 11474 12833 +2134 +1359 +1359 +19.9458% +11.8442% +11.8442%
SCP_Astral_MBR 92167 93648 93648 87066 -5101 -6582 -6582 -5.5345% -7.0284% -7.0284%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 53981 -2541 -2541 -4.4956% -4.4956%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1811184 +148190 +5936 +5936 +8.9110% +0.3288% +0.3288%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1797807 +188901 +27048 +27048 +11.7410% +1.5275% +1.5275%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 129929 +18425 -3719 -3719 +16.5241% -2.7827% -2.7827%
MTAC_3P_Alternating 108267 117420 117420 110829 +2562 -6591 -6591 +2.3664% -5.6132% -5.6132%
MTAC_3P_Standard 110265 118733 118733 111985 +1720 -6748 -6748 +1.5599% -5.6833% -5.6833%
MTAC_Yeast_Alternating_3min 48709 48709 48666 -43 -43 -0.0883% -0.0883%
MTAC_Yeast_Alternating_5min 53969 55370 55197 55376 +1407 +6 +179 +2.6071% +0.0108% +0.3243%
MTAC_Yeast_Standard_3min 48621 50039 49836 49855 +1234 -184 +19 +2.5380% -0.3677% +0.0381%
MTAC_Yeast_Standard_5min 55060 56122 56122 56363 +1303 +241 +241 +2.3665% +0.4294% +0.4294%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 52987 +1715 -5915 -5915 +3.3449% -10.0421% -10.0421%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 12832 -1608 -2184 -2184 -11.1357% -14.5445% -14.5445%
SCP_Astral_1000pg_24ms 14483 15025 15026 11501 -2982 -3524 -3525 -20.5897% -23.4542% -23.4593%
SCP_Astral_1000pg_3ms 8740 9376 9376 9303 +563 -73 -73 +6.4416% -0.7786% -0.7786%
SCP_Astral_1000pg_6ms 8898 9259 9259 9694 +796 +435 +435 +8.9458% +4.6981% +4.6981%
SCP_Astral_10ng_12ms 34865 36293 36293 32189 -2676 -4104 -4104 -7.6753% -11.3080% -11.3080%
SCP_Astral_10ng_24ms 24649 25391 25531 21232 -3417 -4159 -4299 -13.8626% -16.3798% -16.8384%
SCP_Astral_10ng_6ms 40156 41556 41511 39033 -1123 -2523 -2478 -2.7966% -6.0713% -5.9695%
SCP_Astral_10ng_ms 36688 37676 37676 37271 +583 -405 -405 +1.5891% -1.0750% -1.0750%
SCP_Astral_250pg_12ms 3666 3949 3949 3956 +290 +7 +7 +7.9105% +0.1773% +0.1773%
SCP_Astral_250pg_24ms 5299 5611 5611 4189 -1110 -1422 -1422 -20.9473% -25.3431% -25.3431%
SCP_Astral_250pg_3ms 675 721 721 931 +256 +210 +210 +37.9259% +29.1262% +29.1262%
SCP_Astral_250pg_6ms 1436 1738 1738 2116 +680 +378 +378 +47.3538% +21.7491% +21.7491%
SCP_Astral_500pg_12ms 7794 7972 7972 7468 -326 -504 -504 -4.1827% -6.3221% -6.3221%
SCP_Astral_500pg_24ms 9158 9342 9342 6928 -2230 -2414 -2414 -24.3503% -25.8403% -25.8403%
SCP_Astral_500pg_3ms 1846 2629 +783 +42.4160%
SCP_Astral_500pg_6ms 3874 4155 4155 4707 +833 +552 +552 +21.5023% +13.2852% +13.2852%
SCP_Astral_MBR 24110 25035 25035 21353 -2757 -3682 -3682 -11.4351% -14.7074% -14.7074%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 53981 -2541 -2541 -4.4956% -4.4956%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 54243 +3543 -1878 -1878 +6.9882% -3.3463% -3.3463%
EWZ_2P_noMBR_Exploris 50591 56321 56321 54422 +3831 -1899 -1899 +7.5725% -3.3717% -3.3717%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 94714 +6794 +1900 +1900 +7.7275% +2.0471% +2.0471%
MTAC_3P_Alternating 63773 64043 64043 63885 +112 -158 -158 +0.1756% -0.2467% -0.2467%
MTAC_3P_Standard 64317 64591 64591 64197 -120 -394 -394 -0.1866% -0.6100% -0.6100%
MTAC_Yeast_Alternating_3min 12100 12100 12060 -40 -40 -0.3306% -0.3306%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12452 +20 +41 +39 +0.1609% +0.3304% +0.3142%
MTAC_Yeast_Standard_3min 12008 12020 12034 12044 +36 +24 +10 +0.2998% +0.1997% +0.0831%
MTAC_Yeast_Standard_5min 12561 12508 12508 12484 -77 -24 -24 -0.6130% -0.1919% -0.1919%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 151639 +5415 -2163 -2163 +3.7032% -1.4064% -1.4064%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 8887 -276 -651 -651 -3.0121% -6.8253% -6.8253%
SCP_Astral_1000pg_24ms 9298 9857 9852 8385 -913 -1472 -1467 -9.8193% -14.9335% -14.8904%
SCP_Astral_1000pg_3ms 2450 6084 6084 6348 +3898 +264 +264 +159.1020% +4.3393% +4.3393%
SCP_Astral_1000pg_6ms 4703 4588 4588 4974 +271 +386 +386 +5.7623% +8.4133% +8.4133%
SCP_Astral_10ng_12ms 16190 16202 16202 15755 -435 -447 -447 -2.6868% -2.7589% -2.7589%
SCP_Astral_10ng_24ms 13599 13792 13697 12761 -838 -1031 -936 -6.1622% -7.4753% -6.8336%
SCP_Astral_10ng_6ms 17017 17179 17127 16748 -269 -431 -379 -1.5808% -2.5089% -2.2129%
SCP_Astral_10ng_ms 16252 16276 16276 16211 -41 -65 -65 -0.2523% -0.3994% -0.3994%
SCP_Astral_250pg_12ms 3647 3913 3913 3809 +162 -104 -104 +4.4420% -2.6578% -2.6578%
SCP_Astral_250pg_24ms 4300 4603 4603 4171 -129 -432 -432 -3% -9.3852% -9.3852%
SCP_Astral_250pg_3ms 576 22 22 984 +408 +962 +962 +70.8333% +4372.7273% +4372.7273%
SCP_Astral_250pg_6ms 637 2080 2080 2076 +1439 -4 -4 +225.9027% -0.1923% -0.1923%
SCP_Astral_500pg_12ms 6245 6346 6346 5856 -389 -490 -490 -6.2290% -7.7214% -7.7214%
SCP_Astral_500pg_24ms 6722 6729 6729 6147 -575 -582 -582 -8.5540% -8.6491% -8.6491%
SCP_Astral_500pg_3ms 982 2483 +1501 +152.8513%
SCP_Astral_500pg_6ms 3708 4007 4007 3981 +273 -26 -26 +7.3625% -0.6489% -0.6489%
SCP_Astral_MBR 20165 20214 20214 19975 -190 -239 -239 -0.9422% -1.1823% -1.1823%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4631 -31 -31 -0.6650% -0.6650%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 245309 +5825 -495 -495 +2.4323% -0.2014% -0.2014%
EWZ_2P_noMBR_Exploris 235990 245406 245406 245287 +9297 -119 -119 +3.9396% -0.0485% -0.0485%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8186 +341 +12 +12 +4.3467% +0.1468% +0.1468%
MTAC_3P_Alternating 11361 11494 11494 11338 -23 -156 -156 -0.2024% -1.3572% -1.3572%
MTAC_3P_Standard 11473 11609 11609 11412 -61 -197 -197 -0.5317% -1.6970% -1.6970%
MTAC_Yeast_Alternating_3min 4135 4135 4127 -8 -8 -0.1935% -0.1935%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4246 +31 +17 +14 +0.7355% +0.4020% +0.3308%
MTAC_Yeast_Standard_3min 4075 4100 4113 4129 +54 +29 +16 +1.3252% +0.7073% +0.3890%
MTAC_Yeast_Standard_5min 4249 4249 4249 4253 +4 +4 +4 +0.0941% +0.0941% +0.0941%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 7238 -17 -385 -385 -0.2343% -5.0505% -5.0505%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 3103 -142 -294 -294 -4.3760% -8.6547% -8.6547%
SCP_Astral_1000pg_24ms 3254 3466 3469 2901 -353 -565 -568 -10.8482% -16.3012% -16.3736%
SCP_Astral_1000pg_3ms 2450 2396 2396 2505 +55 +109 +109 +2.2449% +4.5492% +4.5492%
SCP_Astral_1000pg_6ms 2508 2436 2436 2631 +123 +195 +195 +4.9043% +8.0049% +8.0049%
SCP_Astral_10ng_12ms 5579 5627 5627 5393 -186 -234 -234 -3.3339% -4.1585% -4.1585%
SCP_Astral_10ng_24ms 4721 4803 4754 4423 -298 -380 -331 -6.3122% -7.9117% -6.9626%
SCP_Astral_10ng_6ms 5846 5950 5930 5753 -93 -197 -177 -1.5908% -3.3109% -2.9848%
SCP_Astral_10ng_ms 5611 5655 5655 5642 +31 -13 -13 +0.5525% -0.2299% -0.2299%
SCP_Astral_250pg_12ms 1292 1424 1424 1388 +96 -36 -36 +7.4303% -2.5281% -2.5281%
SCP_Astral_250pg_24ms 1568 1660 1660 1456 -112 -204 -204 -7.1429% -12.2892% -12.2892%
SCP_Astral_250pg_3ms 307 8 8 373 +66 +365 +365 +21.4984% +4562.5000% +4562.5000%
SCP_Astral_250pg_6ms 637 756 756 767 +130 +11 +11 +20.4082% +1.4550% +1.4550%
SCP_Astral_500pg_12ms 2207 2275 2275 2088 -119 -187 -187 -5.3919% -8.2198% -8.2198%
SCP_Astral_500pg_24ms 2403 2388 2388 2119 -284 -269 -269 -11.8186% -11.2647% -11.2647%
SCP_Astral_500pg_3ms 525 933 +408 +77.7143%
SCP_Astral_500pg_6ms 1318 1447 1447 1454 +136 +7 +7 +10.3187% +0.4838% +0.4838%
SCP_Astral_MBR 4708 4754 4754 4469 -239 -285 -285 -5.0765% -5.9950% -5.9950%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4631 -31 -31 -0.6650% -0.6650%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 6926 +95 -112 -112 +1.3907% -1.5914% -1.5914%
EWZ_2P_noMBR_Exploris 6858 7115 7115 6977 +119 -138 -138 +1.7352% -1.9396% -1.9396%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 -0.0004 +0.0002 -0.0001 -0.0001
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0010 -0.0005 -0.0009 -0.0009
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 -0.0003 +0.0010 -0.0005 -0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0006 +0.0014 +0.0014
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0009 -0.0005 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0021 -0.0002 -0.0008 -0.0008
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0020 -0.0009 -0.0000
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 -0.0021 -0.0019 -0.0023
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0024 -0.0002 -0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0042 +0.0012 -0.0009
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0040 -0.0010 -0.0003 -0.0003
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0009 -0.0007 +0.0002 +0.0002
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0019 +0.0003 +0.0004 +0.0004
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0011 +0.0010 -0.0019
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0031 -0.0007 -0.0005
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0024 -0.0017 -0.0022
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 -0.0067 -0.0028 -0.0027
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012 0.0003 +0.0005 +0.0015
SCP_Astral_250pg_6ms_Entrapment -0.0051
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 -0.0019 +0.0002 +0.0000 +0.0000
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0028 -0.0016 +0.0003
SCP_Astral_500pg_3ms_Entrapment -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031 0.0003 +0.0033 +0.0033
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0015 +0.0012 +0.0002
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0041 -0.0031 -0.0010 -0.0010
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0020 -0.0010 -0.0014 -0.0014
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0030 -0.0017 -0.0007 -0.0007
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0030 +0.0020 +0.0020
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0019 +0.0022 +0.0019 +0.0019
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0045 +0.0013 +0.0005 +0.0005
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0043 -0.0007 +0.0002
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0039 -0.0010 -0.0042
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0055 -0.0005 -0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0036 +0.0034 +0.0023
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0059 -0.0000 -0.0024 -0.0024
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0005 +0.0012 +0.0044 +0.0044
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0064 -0.0010 -0.0015 -0.0015
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 0.0019 +0.0051 +0.0041
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0043 -0.0006 +0.0030
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0030 +0.0024 -0.0007
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0061 -0.0008 +0.0015
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042 -0.0043 -0.0001 -0.0001
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0057 +0.0042 +0.0010 +0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0022 +0.0014 +0.0032 +0.0032
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0069 -0.0049 -0.0060
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 0.0046 +0.0091 +0.0091 +0.0091
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 0.0002 +0.0061 +0.0020
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 -0.0004 +0.0001 +0.0000 +0.0000
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 -0.0006 -0.0004 -0.0008 -0.0008
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 -0.0004 +0.0005 -0.0005 -0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0005 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0007 -0.0003 +0.0001 +0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0014 -0.0006 -0.0007 -0.0007
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0012 -0.0004 -0.0002
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0013 -0.0008 -0.0017
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0022 -0.0006 -0.0009
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0038 +0.0008 -0.0010
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0024 -0.0004 -0.0002 -0.0002
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0011 -0.0012 -0.0005 -0.0005
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0015 +0.0002 -0.0003 -0.0003
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0003 +0.0011 -0.0006
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0020 -0.0001 -0.0000
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0018 -0.0013 -0.0020
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 -0.0048 -0.0018 -0.0021
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008 -0.0008 -0.0001 +0.0000
SCP_Astral_250pg_6ms_Entrapment -0.0037
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 -0.0014 +0.0005 -0.0002 -0.0002
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0035 -0.0019 -0.0014
SCP_Astral_500pg_3ms_Entrapment 0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025 -0.0011 +0.0014 +0.0014
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0011 +0.0007 +0.0004
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0012 -0.0010 +0.0007 +0.0007
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0009 -0.0007 -0.0010 -0.0010
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0018 -0.0009 -0.0005 -0.0005
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0018 +0.0012 +0.0012
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0004 +0.0033 +0.0017 +0.0017
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0029 +0.0009 +0.0002 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0035 -0.0012 -0.0008
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0024 +0.0003 -0.0029
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0032 +0.0005 +0.0000
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0035 +0.0013 +0.0020
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0023 +0.0021 -0.0007 -0.0007
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0001 +0.0024 +0.0034 +0.0034
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0046 +0.0001 -0.0014 -0.0014
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 0.0017 +0.0049 +0.0030
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0023 -0.0001 +0.0023
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0027 +0.0012 +0.0003
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0036 +0.0003 +0.0005
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032 -0.0038 -0.0025 -0.0007
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0028 +0.0072 +0.0040 +0.0040
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0011 +0.0028 +0.0029 +0.0029
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0045 -0.0026 -0.0044
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 0.0021 +0.0041 +0.0043 +0.0043
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0010 +0.0014 +0.0005
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.0418 +0.0287 +0.0351 +0.0351

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 0 -0.0476 -0.4086 -0.4086

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 2 +1 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 2 +1 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 4 +0 +0 +4
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 15 +4 +0 +2
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 14 +4 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 15 +3 +0 +2
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1484 +0.0025 +0.0061 +0.0061
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1417 +0.0024 +0.0054 +0.0054
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1456 +0.0001 +0.0001
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1409 -0.0122 +0.0007 +0.0005
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1643 -0.0055 -0.0000 +0.0002
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1378 -0.0125 +0.0009 +0.0009
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1519 +0.0039 +0.0020 +0.0020
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0763 +0.0000 +0.0026 +0.0026
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0717 -0.0006 +0.0013 +0.0013
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0678 +0.0007 +0.0007
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0603 -0.0175 +0.0007 +0.0005
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0755 -0.0037 -0.0017 -0.0016
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0565 -0.0205 -0.0001 -0.0001
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1036 +0.0008 +0.0016 +0.0016
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0636 -0.0024 +0 -0.0053
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0390 -0.0079 +0 +0.0038
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 -0.0121 +0.0017 +0 +0.0078
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.1164 +0.0015 +0 -0.0096
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0737 -0.0055 +0 +0.0007
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0392 -0.0083 +0 +0.0138
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2273 -0.0038 +0 +0.0039
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0713 +0.0068 +0 -0.0041
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2750 +0.0186 +0 +0.0009
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.0969 +0.0049 +0 -0.0035
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0515 +0.0004 +0 -0.0024
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2070 +0.0054 +0 +0.0017
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0360 -0.0014 +0 -0.0104
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1058 +0.0042 +0 -0.0060
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0782 +0.0227 +0 -0.0124
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0559 +0.0011 +0 -0.0105
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0415 -0.0083 +0 +0.0047
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 -0.0142 +0.0048 +0 +0.0077
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.1141 +0.0000 +0 -0.0104
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0726 -0.0064 +0 +0.0018
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0417 -0.0075 +0 +0.0170
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2244 -0.0039 +0 +0.0112
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0671 +0.0080 +0 -0.0072
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.3036 +0.0484 +0 -0.0007
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0869 +0.0037 +0 -0.0009
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0484 +0.0006 +0 -0.0024
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2052 +0.0038 +0 +0.0026
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0275 -0.0047 +0 -0.0111
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1181 +0.0068 +0 +0.0018
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.1154 +0.0509 +0 +0.0111
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2918 +0.0367 +0 -0.0069
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.2037 +0.0142 +0 -0.0089
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2651 +0.0148 +0 -0.0056
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.3194 +0.0404 +0 +0.0108
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.2074 +0.0168 +0 -0.0156
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2572 +0.0186 +0 -0.0169
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.7386 +0.0339 +0 +0.1263
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1640 -0.0061 +0 +0.0072
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 1.0794 +0.0041 +0 +0.2709
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3321 +0.0015 +0 -0.0067
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1709 +0.0655 +0 -0.0041
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3328 +0.0280 +0 +0.0023
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.6648 -0.0228 +0 +0.0687
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2521 +0.0964 +0 +0.0060
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.4545 +0.0666 +0 +0.3020
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1541 +0.0230 +0 +0.0016
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0755 +0.0026 +0 -0.0002
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1205 -0.0177 +0 +0.0083
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1412 -0.0076 +0 +0.0168
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0767 +0.0026 +0 +0.0062
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1199 +0.0033 +0 -0.0095
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2356 +0.0457 +0 -0.0133
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0499 -0.0061 +0 -0.0076
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.5280 -0.0364 +0 +0.1060
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0659 -0.0059 +0 +0.0072
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0335 +0.0045 +0 -0.0011
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0919 -0.0018 +0 +0.0178
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.2465 -0.0276 +0 +0.0405
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0804 +0.0043 +0 +0.0046
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.4247 -0.1098 +0 +0.0035
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 17.6900 -6.3800 -5.1100 -1.9600 -26.5060% -22.4123% -9.9746%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 7.2900 -5.4600 -6.3900 -1.2800 -42.8235% -46.7105% -14.9358%
MTAC_3P_Standard 12.3100 13.0600 10.2700 7.4300 -4.8800 -5.6300 -2.8400 -39.6426% -43.1087% -27.6534%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 4 -1.4900 -0.0600 -27.1403% -1.4778%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.0800 -1.3000 -0.6400 -0.0700 -24.1636% -13.5593% -1.6867%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 3.9900 -1.4400 -1.6600 -0.0300 -26.5193% -29.3805% -0.7463%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.1100 -1.4400 -0.1900 -0.1800 -25.9459% -4.4186% -4.1958%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 14.0200 -13.6400 -9.7000 -6.3000 -49.3131% -40.8938% -31.0039%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000 3.8700 -1.9200 -2.0300 -33.1606% -34.4068%
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.7100 -0.8100 -2.4000 -0.0500 -17.9204% -39.2799% -1.3298%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.9900 -1.7500 +0.4600 +0.4600 -30.4878% +13.0312% +13.0312%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.3100 -1.7600 -0.3200 -0.1300 -24.8939% -5.6838% -2.3897%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200 5.2200 -2.3700 -3.1400 -0.7000 -31.2253% -37.5598% -11.8243%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 4.8500 -2.5300 -0.0400 +0.0600 -34.2818% -0.8180% +1.2526%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.7000 -1.7500 -0.4900 +0.0400 -27.1318% -9.4412% +0.8584%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100 3.4700 -1.7900 -0.7200 -0.1400 -34.0304% -17.1838% -3.8781%
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4600 -1.1900 -0.3700 +0 -25.5914% -9.6606% +0%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3300 -0.8400 -0.0600 +0.0600 -20.1439% -1.7699% +1.8349%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400
SCP_Astral_500pg_24ms 5.5100 3.8200 3.5900 -1.9200 -0.2300 -34.8457% -6.0209%
SCP_Astral_500pg_3ms 4.7300 3.4400 -1.2900 -27.2727%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.4600 -1.1900 +0.0300 -0.0500 -25.5914% +0.8746% -1.4245%
SCP_Astral_MBR 9.0400
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 5.3300 +1.0200 -0.4100 +23.6659% -7.1429%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 20.4900 -8.5100 -8.7000 -4.2600 -29.3448% -29.8047% -17.2121%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 19.2200 -7.8900 -9.0900 -2.8500 -29.1037% -32.1088% -12.9135%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png