Regression Metrics Report

Versions: v0.6.4, v0.6.6, develop, current

Metric: identification.precursors.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 5499336 7770128 7834374
KEAP1KO_Eclipse 1096494 1311411 1311411 1362011 +265517 +50600 +50600 +24.2151% +3.8584% +3.8584%
MTAC_3P_Alternating 586322 616475 616475 579926 -6396 -36549 -36549 -1.0909% -5.9287% -5.9287%
MTAC_3P_Standard 596590 623500 623500 585295 -11295 -38205 -38205 -1.8933% -6.1275% -6.1275%
MTAC_Yeast_Alternating_3min 137143 137143 133251 -3892 -3892 -2.8379% -2.8379%
MTAC_Yeast_Alternating_5min 155641 156733 156562 153852 -1789 -2881 -2710 -1.1494% -1.8382% -1.7309%
MTAC_Yeast_Standard_3min 138509 139777 139662 136472 -2037 -3305 -3190 -1.4707% -2.3645% -2.2841%
MTAC_Yeast_Standard_5min 158962 158983 158983 155507 -3455 -3476 -3476 -2.1735% -2.1864% -2.1864%
Olsen_Astral_3P 3282083 3760070 3760070
Olsen_Exploris_3P 1022736 1155533 1155533 1059409 +36673 -96124 -96124 +3.5858% -8.3186% -8.3186%
SCIEX_3P 672242 749418 749418
SCP_Astral_1000pg_12ms 40882 41855 41855 32912 -7970 -8943 -8943 -19.4951% -21.3666% -21.3666%
SCP_Astral_1000pg_24ms 41069 42339 42344 28988 -12081 -13351 -13356 -29.4163% -31.5336% -31.5417%
SCP_Astral_1000pg_3ms 8740 23115 23115 22896 +14156 -219 -219 +161.9680% -0.9474% -0.9474%
SCP_Astral_1000pg_6ms 16935 17553 17553 17976 +1041 +423 +423 +6.1470% +2.4098% +2.4098%
SCP_Astral_10ng_12ms 99908 102934 102934 85844 -14064 -17090 -17090 -14.0770% -16.6029% -16.6029%
SCP_Astral_10ng_24ms 71098 72525 72805 56282 -14816 -16243 -16523 -20.8388% -22.3964% -22.6949%
SCP_Astral_10ng_6ms 115157 117282 117413 104016 -11141 -13266 -13397 -9.6746% -11.3112% -11.4102%
SCP_Astral_10ng_ms 105704 106497 106497 99396 -6308 -7101 -7101 -5.9676% -6.6678% -6.6678%
SCP_Astral_250pg_12ms 10194 10806 10806 9993 -201 -813 -813 -1.9717% -7.5236% -7.5236%
SCP_Astral_250pg_24ms 14807 15433 15433
SCP_Astral_250pg_3ms 1261 2032 2032 2483 +1222 +451 +451 +96.9072% +22.1949% +22.1949%
SCP_Astral_250pg_6ms 1436 4783 4783 5641 +4205 +858 +858 +292.8273% +17.9385% +17.9385%
SCP_Astral_500pg_12ms 21710 21895 21895 18482 -3228 -3413 -3413 -14.8687% -15.5880% -15.5880%
SCP_Astral_500pg_24ms 25860 26143 26143 17079 -8781 -9064 -9064 -33.9559% -34.6708% -34.6708%
SCP_Astral_500pg_3ms 3484 6931 +3447 +98.9380%
SCP_Astral_500pg_6ms 10699 11474 11474 12915 +2216 +1441 +1441 +20.7122% +12.5588% +12.5588%
SCP_Astral_MBR 92167 93648 93648 81489 -10678 -12159 -12159 -11.5855% -12.9837% -12.9837%
Seer_Astral_45 2512737 3122633 3122633
Seer_Astral_single 56522 56522 52006 -4516 -4516 -7.9898% -7.9898%
YEAST_KO_Astral 16088274 20363242 20387044
EWZ_2P_MBR_Exploris 1662994 1805248 1805248 1775085 +112091 -30163 -30163 +6.7403% -1.6709% -1.6709%
EWZ_2P_noMBR_Exploris 1608906 1770759 1770759 1774481 +165575 +3722 +3722 +10.2912% +0.2102% +0.2102%

Metric: identification.precursors.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 246168 430621 431564
KEAP1KO_Eclipse 111504 133648 133648 123821 +12317 -9827 -9827 +11.0462% -7.3529% -7.3529%
MTAC_3P_Alternating 108267 117420 117420 101394 -6873 -16026 -16026 -6.3482% -13.6484% -13.6484%
MTAC_3P_Standard 110265 118733 118733 102433 -7832 -16300 -16300 -7.1029% -13.7283% -13.7283%
MTAC_Yeast_Alternating_3min 48709 48709 46348 -2361 -2361 -4.8472% -4.8472%
MTAC_Yeast_Alternating_5min 53969 55370 55197 53256 -713 -2114 -1941 -1.3211% -3.8180% -3.5165%
MTAC_Yeast_Standard_3min 48621 50039 49836 47636 -985 -2403 -2200 -2.0259% -4.8023% -4.4145%
MTAC_Yeast_Standard_5min 55060 56122 56122 53865 -1195 -2257 -2257 -2.1704% -4.0216% -4.0216%
Olsen_Astral_3P 198770 231187 231187
Olsen_Exploris_3P 51272 58902 58902 49519 -1753 -9383 -9383 -3.4190% -15.9298% -15.9298%
SCIEX_3P 82206 93832 93832
SCP_Astral_1000pg_12ms 14440 15016 15016 11318 -3122 -3698 -3698 -21.6205% -24.6271% -24.6271%
SCP_Astral_1000pg_24ms 14483 15025 15026 9859 -4624 -5166 -5167 -31.9271% -34.3827% -34.3871%
SCP_Astral_1000pg_3ms 8740 9376 9376 9142 +402 -234 -234 +4.5995% -2.4957% -2.4957%
SCP_Astral_1000pg_6ms 8898 9259 9259 9480 +582 +221 +221 +6.5408% +2.3869% +2.3869%
SCP_Astral_10ng_12ms 34865 36293 36293 29082 -5783 -7211 -7211 -16.5868% -19.8688% -19.8688%
SCP_Astral_10ng_24ms 24649 25391 25531 19078 -5571 -6313 -6453 -22.6013% -24.8631% -25.2752%
SCP_Astral_10ng_6ms 40156 41556 41511 35342 -4814 -6214 -6169 -11.9882% -14.9533% -14.8611%
SCP_Astral_10ng_ms 36688 37676 37676 34378 -2310 -3298 -3298 -6.2963% -8.7536% -8.7536%
SCP_Astral_250pg_12ms 3666 3949 3949 3609 -57 -340 -340 -1.5548% -8.6098% -8.6098%
SCP_Astral_250pg_24ms 5299 5611 5611
SCP_Astral_250pg_3ms 675 721 721 931 +256 +210 +210 +37.9259% +29.1262% +29.1262%
SCP_Astral_250pg_6ms 1436 1738 1738 2127 +691 +389 +389 +48.1198% +22.3820% +22.3820%
SCP_Astral_500pg_12ms 7794 7972 7972 6450 -1344 -1522 -1522 -17.2440% -19.0918% -19.0918%
SCP_Astral_500pg_24ms 9158 9342 9342 5850 -3308 -3492 -3492 -36.1214% -37.3796% -37.3796%
SCP_Astral_500pg_3ms 1846 2629 +783 +42.4160%
SCP_Astral_500pg_6ms 3874 4155 4155 4745 +871 +590 +590 +22.4832% +14.1998% +14.1998%
SCP_Astral_MBR 24110 25035 25035 19204 -4906 -5831 -5831 -20.3484% -23.2914% -23.2914%
Seer_Astral_45 69584 89971 89971
Seer_Astral_single 56522 56522 52006 -4516 -4516 -7.9898% -7.9898%
YEAST_KO_Astral 66823 87992 87947
EWZ_2P_MBR_Exploris 50700 56121 56121 51658 +958 -4463 -4463 +1.8895% -7.9525% -7.9525%
EWZ_2P_noMBR_Exploris 50591 56321 56321 51883 +1292 -4438 -4438 +2.5538% -7.8798% -7.8798%

Metric: identification.protein_groups.total

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 603278 723191 726455
KEAP1KO_Eclipse 87920 92814 92814 95565 +7645 +2751 +2751 +8.6954% +2.9640% +2.9640%
MTAC_3P_Alternating 63773 64043 64043 62638 -1135 -1405 -1405 -1.7798% -2.1938% -2.1938%
MTAC_3P_Standard 64317 64591 64591 63247 -1070 -1344 -1344 -1.6636% -2.0808% -2.0808%
MTAC_Yeast_Alternating_3min 12100 12100 11859 -241 -241 -1.9917% -1.9917%
MTAC_Yeast_Alternating_5min 12432 12411 12413 12446 +14 +35 +33 +0.1126% +0.2820% +0.2659%
MTAC_Yeast_Standard_3min 12008 12020 12034 11954 -54 -66 -80 -0.4497% -0.5491% -0.6648%
MTAC_Yeast_Standard_5min 12561 12508 12508 12401 -160 -107 -107 -1.2738% -0.8555% -0.8555%
Olsen_Astral_3P 236395 245754 245754
Olsen_Exploris_3P 146224 153802 153802 149830 +3606 -3972 -3972 +2.4661% -2.5825% -2.5825%
SCIEX_3P 70810 74209 74209
SCP_Astral_1000pg_12ms 9163 9538 9538 8324 -839 -1214 -1214 -9.1564% -12.7280% -12.7280%
SCP_Astral_1000pg_24ms 9298 9857 9852 7742 -1556 -2115 -2110 -16.7348% -21.4568% -21.4170%
SCP_Astral_1000pg_3ms 2450 6084 6084 6266 +3816 +182 +182 +155.7551% +2.9915% +2.9915%
SCP_Astral_1000pg_6ms 4703 4588 4588 4929 +226 +341 +341 +4.8054% +7.4324% +7.4324%
SCP_Astral_10ng_12ms 16190 16202 16202 15161 -1029 -1041 -1041 -6.3558% -6.4251% -6.4251%
SCP_Astral_10ng_24ms 13599 13792 13697 12339 -1260 -1453 -1358 -9.2654% -10.5351% -9.9146%
SCP_Astral_10ng_6ms 17017 17179 17127 16234 -783 -945 -893 -4.6013% -5.5009% -5.2140%
SCP_Astral_10ng_ms 16252 16276 16276 15804 -448 -472 -472 -2.7566% -2.9000% -2.9000%
SCP_Astral_250pg_12ms 3647 3913 3913 3671 +24 -242 -242 +0.6581% -6.1845% -6.1845%
SCP_Astral_250pg_24ms 4300 4603 4603
SCP_Astral_250pg_3ms 576 22 22 984 +408 +962 +962 +70.8333% +4372.7273% +4372.7273%
SCP_Astral_250pg_6ms 637 2080 2080 2075 +1438 -5 -5 +225.7457% -0.2404% -0.2404%
SCP_Astral_500pg_12ms 6245 6346 6346 5532 -713 -814 -814 -11.4171% -12.8270% -12.8270%
SCP_Astral_500pg_24ms 6722 6729 6729 5379 -1343 -1350 -1350 -19.9792% -20.0624% -20.0624%
SCP_Astral_500pg_3ms 982 2483 +1501 +152.8513%
SCP_Astral_500pg_6ms 3708 4007 4007 4085 +377 +78 +78 +10.1672% +1.9466% +1.9466%
SCP_Astral_MBR 20165 20214 20214 19787 -378 -427 -427 -1.8745% -2.1124% -2.1124%
Seer_Astral_45 225377 241502 241502
Seer_Astral_single 4662 4662 4515 -147 -147 -3.1532% -3.1532%
YEAST_KO_Astral 1300836 1388950 1386974
EWZ_2P_MBR_Exploris 239484 245804 245804 242733 +3249 -3071 -3071 +1.3567% -1.2494% -1.2494%
EWZ_2P_noMBR_Exploris 235990 245406 245406 242618 +6628 -2788 -2788 +2.8086% -1.1361% -1.1361%

Metric: identification.protein_groups.unique

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 21740 28560 28358
KEAP1KO_Eclipse 7845 8174 8174 8029 +184 -145 -145 +2.3454% -1.7739% -1.7739%
MTAC_3P_Alternating 11361 11494 11494 10938 -423 -556 -556 -3.7233% -4.8373% -4.8373%
MTAC_3P_Standard 11473 11609 11609 11093 -380 -516 -516 -3.3121% -4.4448% -4.4448%
MTAC_Yeast_Alternating_3min 4135 4135 4040 -95 -95 -2.2975% -2.2975%
MTAC_Yeast_Alternating_5min 4215 4229 4232 4226 +11 -3 -6 +0.2610% -0.0709% -0.1418%
MTAC_Yeast_Standard_3min 4075 4100 4113 4075 +0 -25 -38 +0% -0.6098% -0.9239%
MTAC_Yeast_Standard_5min 4249 4249 4249 4213 -36 -36 -36 -0.8473% -0.8473% -0.8473%
Olsen_Astral_3P 13820 14399 14399
Olsen_Exploris_3P 7255 7623 7623 6996 -259 -627 -627 -3.5700% -8.2251% -8.2251%
SCIEX_3P 8652 9081 9081
SCP_Astral_1000pg_12ms 3245 3397 3397 2869 -376 -528 -528 -11.5871% -15.5431% -15.5431%
SCP_Astral_1000pg_24ms 3254 3466 3469 2651 -603 -815 -818 -18.5310% -23.5141% -23.5803%
SCP_Astral_1000pg_3ms 2450 2396 2396 2448 -2 +52 +52 -0.0816% +2.1703% +2.1703%
SCP_Astral_1000pg_6ms 2508 2436 2436 2594 +86 +158 +158 +3.4290% +6.4860% +6.4860%
SCP_Astral_10ng_12ms 5579 5627 5627 5187 -392 -440 -440 -7.0263% -7.8194% -7.8194%
SCP_Astral_10ng_24ms 4721 4803 4754 4201 -520 -602 -553 -11.0146% -12.5338% -11.6323%
SCP_Astral_10ng_6ms 5846 5950 5930 5515 -331 -435 -415 -5.6620% -7.3109% -6.9983%
SCP_Astral_10ng_ms 5611 5655 5655 5447 -164 -208 -208 -2.9228% -3.6782% -3.6782%
SCP_Astral_250pg_12ms 1292 1424 1424 1329 +37 -95 -95 +2.8638% -6.6713% -6.6713%
SCP_Astral_250pg_24ms 1568 1660 1660
SCP_Astral_250pg_3ms 307 8 8 373 +66 +365 +365 +21.4984% +4562.5000% +4562.5000%
SCP_Astral_250pg_6ms 637 756 756 766 +129 +10 +10 +20.2512% +1.3228% +1.3228%
SCP_Astral_500pg_12ms 2207 2275 2275 1960 -247 -315 -315 -11.1917% -13.8462% -13.8462%
SCP_Astral_500pg_24ms 2403 2388 2388 1839 -564 -549 -549 -23.4707% -22.9899% -22.9899%
SCP_Astral_500pg_3ms 525 933 +408 +77.7143%
SCP_Astral_500pg_6ms 1318 1447 1447 1488 +170 +41 +41 +12.8983% +2.8334% +2.8334%
SCP_Astral_MBR 4708 4754 4754 4261 -447 -493 -493 -9.4945% -10.3702% -10.3702%
Seer_Astral_45 5802 6299 6299
Seer_Astral_single 4662 4662 4515 -147 -147 -3.1532% -3.1532%
YEAST_KO_Astral 4565 4793 4786
EWZ_2P_MBR_Exploris 6831 7038 7038 6746 -85 -292 -292 -1.2443% -4.1489% -4.1489%
EWZ_2P_noMBR_Exploris 6858 7115 7115 6782 -76 -333 -333 -1.1082% -4.6803% -4.6803%

Metric: entrapment.summaries.global_precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0006 -0.0003 -0.0003 0.0007 +0.0012 +0.0009 +0.0009
MTAC_3P_Alternating_Entrapment -0.0005 -0.0001 -0.0001 -0.0012 -0.0007 -0.0011 -0.0011
MTAC_3P_Standard_Entrapment -0.0014 0.0002 0.0002 -0.0006 +0.0007 -0.0008 -0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0020 -0.0020 -0.0024 -0.0004 -0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0013 -0.0013 -0.0013 -0.0010 -0.0001 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0019 -0.0013 -0.0013 -0.0011 +0.0008 +0.0002 +0.0002
MTAC_Yeast_Standard_5min_Entrapment -0.0010 -0.0020 -0.0020 -0.0010 -0.0001
Olsen_Astral_3P_Entrapment -0.0015 -0.0011
Olsen_Exploris_3P_Entrapment -0.0002 0.0002 -0.0010 -0.0008 -0.0012
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0023 -0.0016 -0.0036 -0.0013 -0.0020
SCP_Astral_1000pg_24ms_Entrapment -0.0054 -0.0033 -0.0040 +0.0014 -0.0007
SCP_Astral_1000pg_3ms_Entrapment -0.0030 -0.0037 -0.0037 -0.0055 -0.0025 -0.0018 -0.0018
SCP_Astral_1000pg_6ms_Entrapment -0.0002 -0.0011 -0.0011 -0.0014 -0.0012 -0.0003 -0.0003
SCP_Astral_10ng_12ms_Entrapment -0.0022 -0.0023 -0.0023 -0.0024 -0.0002 -0.0001 -0.0001
SCP_Astral_10ng_24ms_Entrapment -0.0020 0.0009 -0.0016 +0.0004 -0.0025
SCP_Astral_10ng_3ms_Entrapment -0.0024 -0.0027 -0.0034 -0.0010 -0.0008
SCP_Astral_10ng_6ms_Entrapment -0.0008 -0.0003 -0.0024 -0.0017 -0.0022
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0040 0.0029 +0.0068 +0.0069
SCP_Astral_250pg_24ms_Entrapment -0.0002 -0.0012
SCP_Astral_250pg_6ms_Entrapment -0.0051 -0.0041 +0.0010
SCP_Astral_500pg_12ms_Entrapment -0.0022 -0.0020 -0.0020 0.0008 +0.0029 +0.0028 +0.0028
SCP_Astral_500pg_24ms_Entrapment -0.0013 -0.0031 -0.0030 -0.0017 +0.0001
SCP_Astral_500pg_3ms_Entrapment -0.0013
SCP_Astral_500pg_6ms_Entrapment -0.0031 -0.0031
SCP_Astral_MBR_Entrapment -0.0026 -0.0017 -0.0010 +0.0017 +0.0008
YEAST_KO_Astral_Entrapment -0.0024 -0.0025 -0.0025

Metric: entrapment.summaries.global_proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0010 -0.0031 -0.0031 -0.0013 -0.0003 +0.0018 +0.0018
MTAC_3P_Alternating_Entrapment -0.0010 -0.0006 -0.0006 -0.0028 -0.0018 -0.0022 -0.0022
MTAC_3P_Standard_Entrapment -0.0013 -0.0022 -0.0022 -0.0031 -0.0018 -0.0009 -0.0009
MTAC_Yeast_Alternating_3min_Entrapment -0.0050 -0.0050 -0.0054 -0.0004 -0.0004
MTAC_Yeast_Alternating_5min_Entrapment -0.0041 -0.0038 -0.0038 -0.0034 +0.0007 +0.0004 +0.0004
MTAC_Yeast_Standard_3min_Entrapment -0.0058 -0.0050 -0.0050 -0.0051 +0.0007 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0036 -0.0045 -0.0032 +0.0004 +0.0014
Olsen_Astral_3P_Entrapment -0.0041 -0.0034
Olsen_Exploris_3P_Entrapment -0.0029 0.0002 -0.0021 +0.0008 -0.0023
SCIEX_3P_Entrapment -0.0031 -0.0032
SCP_Astral_1000pg_12ms_Entrapment -0.0049 -0.0046 -0.0062 -0.0013 -0.0017
SCP_Astral_1000pg_24ms_Entrapment -0.0070 -0.0058 -0.0053 +0.0017 +0.0005
SCP_Astral_1000pg_3ms_Entrapment -0.0059 -0.0036 -0.0036 -0.0001 +0.0058 +0.0035 +0.0035
SCP_Astral_1000pg_6ms_Entrapment -0.0018 -0.0049 -0.0049 -0.0014 +0.0004 +0.0035 +0.0035
SCP_Astral_10ng_12ms_Entrapment -0.0054 -0.0049 -0.0049 -0.0057 -0.0002 -0.0007 -0.0007
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0023 -0.0001 +0.0032 +0.0022
SCP_Astral_10ng_3ms_Entrapment -0.0037 -0.0073 -0.0053 -0.0016 +0.0020
SCP_Astral_10ng_6ms_Entrapment -0.0054 -0.0023 -0.0055 -0.0001 -0.0032
SCP_Astral_250pg_12ms_Entrapment -0.0053 -0.0076 -0.0021 +0.0032 +0.0056
SCP_Astral_250pg_24ms_Entrapment -0.0042 -0.0042
SCP_Astral_250pg_3ms_Entrapment -0.0028 0 0 0 +0.0028 +0 +0
SCP_Astral_250pg_6ms_Entrapment -0.0099 -0.0067 -0.0067 -0.0092 +0.0007 -0.0025 -0.0025
SCP_Astral_500pg_12ms_Entrapment -0.0036 -0.0054 -0.0054 -0.0049 -0.0014 +0.0005 +0.0005
SCP_Astral_500pg_24ms_Entrapment -0.0020 -0.0008 -0.0082 -0.0062 -0.0073
SCP_Astral_500pg_3ms_Entrapment -0.0042 0.0071 -0.0037 +0.0005 -0.0107
SCP_Astral_500pg_6ms_Entrapment -0.0045 -0.0045 -0.0045 -0.0053 -0.0008 -0.0007 -0.0007
SCP_Astral_MBR_Entrapment -0.0059 -0.0019 -0.0008 +0.0051 +0.0010
YEAST_KO_Astral_Entrapment -0.0065 -0.0049 -0.0049

Metric: entrapment.summaries.precursors.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0005 -0.0004 -0.0004 0.0007 +0.0012 +0.0011 +0.0011
MTAC_3P_Alternating_Entrapment -0.0001 0.0003 0.0003 -0.0007 -0.0006 -0.0010 -0.0010
MTAC_3P_Standard_Entrapment -0.0009 0.0001 0.0001 -0.0001 +0.0008 -0.0002 -0.0002
MTAC_Yeast_Alternating_3min_Entrapment -0.0013 -0.0013 -0.0016 -0.0003 -0.0003
MTAC_Yeast_Alternating_5min_Entrapment -0.0004 -0.0008 -0.0008 -0.0008 -0.0005 -0.0001 -0.0001
MTAC_Yeast_Standard_3min_Entrapment -0.0008 -0.0007 -0.0007 -0.0008 +0.0000 -0.0001 -0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0008 -0.0010 -0.0013 -0.0005 -0.0003
Olsen_Astral_3P_Entrapment -0.0008 -0.0004
Olsen_Exploris_3P_Entrapment -0.0004 0.0005 -0.0007 -0.0003 -0.0012
SCIEX_3P_Entrapment -0.0005 -0.0001
SCP_Astral_1000pg_12ms_Entrapment -0.0015 -0.0013 -0.0027 -0.0012 -0.0014
SCP_Astral_1000pg_24ms_Entrapment -0.0046 -0.0028 -0.0031 +0.0014 -0.0003
SCP_Astral_1000pg_3ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0028 -0.0008 -0.0005 -0.0005
SCP_Astral_1000pg_6ms_Entrapment 0.0002 -0.0006 -0.0006 -0.0003 -0.0004 +0.0003 +0.0003
SCP_Astral_10ng_12ms_Entrapment -0.0017 -0.0012 -0.0012 -0.0021 -0.0004 -0.0009 -0.0009
SCP_Astral_10ng_24ms_Entrapment -0.0014 0.0004 -0.0013 +0.0001 -0.0016
SCP_Astral_10ng_3ms_Entrapment -0.0019 -0.0020 -0.0020 -0.0001 -0.0001
SCP_Astral_10ng_6ms_Entrapment -0.0005 0.0002 -0.0018 -0.0013 -0.0020
SCP_Astral_250pg_12ms_Entrapment -0.0030 -0.0027 0.0027 +0.0057 +0.0054
SCP_Astral_250pg_24ms_Entrapment -0.0007 -0.0008
SCP_Astral_250pg_6ms_Entrapment -0.0037 -0.0043 -0.0006
SCP_Astral_500pg_12ms_Entrapment -0.0019 -0.0012 -0.0012 0.0008 +0.0026 +0.0020 +0.0020
SCP_Astral_500pg_24ms_Entrapment -0.0016 -0.0021 -0.0030 -0.0014 -0.0009
SCP_Astral_500pg_3ms_Entrapment 0.0019
SCP_Astral_500pg_6ms_Entrapment -0.0025 -0.0025
SCP_Astral_MBR_Entrapment -0.0017 -0.0015 -0.0010 +0.0007 +0.0005
YEAST_KO_Astral_Entrapment -0.0013 -0.0006 -0.0006

Metric: entrapment.summaries.proteins.difference

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris_Entrapment -0.0002 -0.0019 -0.0019 -0.0004 -0.0002 +0.0015 +0.0015
MTAC_3P_Alternating_Entrapment -0.0001 0.0001 0.0001 -0.0020 -0.0019 -0.0021 -0.0021
MTAC_3P_Standard_Entrapment -0.0008 -0.0012 -0.0012 -0.0021 -0.0012 -0.0008 -0.0008
MTAC_Yeast_Alternating_3min_Entrapment -0.0030 -0.0030 -0.0036 -0.0006 -0.0006
MTAC_Yeast_Alternating_5min_Entrapment -0.0037 -0.0021 -0.0021 -0.0018 +0.0019 +0.0003 +0.0003
MTAC_Yeast_Standard_3min_Entrapment -0.0038 -0.0032 -0.0032 -0.0031 +0.0007 +0.0001 +0.0001
MTAC_Yeast_Standard_5min_Entrapment -0.0023 -0.0027 -0.0031 -0.0008 -0.0004
Olsen_Astral_3P_Entrapment -0.0024 -0.0024
Olsen_Exploris_3P_Entrapment -0.0026 0.0005 -0.0020 +0.0007 -0.0025
SCIEX_3P_Entrapment -0.0036 -0.0031
SCP_Astral_1000pg_12ms_Entrapment -0.0037 -0.0032 -0.0040 -0.0003 -0.0008
SCP_Astral_1000pg_24ms_Entrapment -0.0049 -0.0056 -0.0040 +0.0008 +0.0015
SCP_Astral_1000pg_3ms_Entrapment -0.0044 -0.0016 -0.0016 -0.0004 +0.0040 +0.0012 +0.0012
SCP_Astral_1000pg_6ms_Entrapment -0.0025 -0.0035 -0.0035 -0.0003 +0.0022 +0.0032 +0.0032
SCP_Astral_10ng_12ms_Entrapment -0.0047 -0.0032 -0.0032 -0.0049 -0.0001 -0.0016 -0.0016
SCP_Astral_10ng_24ms_Entrapment -0.0032 -0.0014 -0.0006 +0.0026 +0.0008
SCP_Astral_10ng_3ms_Entrapment -0.0021 -0.0046 -0.0031 -0.0010 +0.0015
SCP_Astral_10ng_6ms_Entrapment -0.0039 -0.0030 -0.0035 +0.0004 -0.0005
SCP_Astral_250pg_12ms_Entrapment -0.0039 -0.0041 -0.0018 +0.0020 +0.0023
SCP_Astral_250pg_24ms_Entrapment -0.0013 -0.0032
SCP_Astral_250pg_3ms_Entrapment -0.0060 -0.0082 -0.0082 -0.0049 +0.0011 +0.0033 +0.0033
SCP_Astral_250pg_6ms_Entrapment -0.0100 -0.0068 -0.0068 -0.0045 +0.0054 +0.0023 +0.0023
SCP_Astral_500pg_12ms_Entrapment -0.0040 -0.0040 -0.0040 -0.0030 +0.0009 +0.0010 +0.0010
SCP_Astral_500pg_24ms_Entrapment -0.0019 -0.0001 -0.0049 -0.0029 -0.0048
SCP_Astral_500pg_3ms_Entrapment -0.0032 0.0066 -0.0017 +0.0015 -0.0084
SCP_Astral_500pg_6ms_Entrapment -0.0020 -0.0022 -0.0022 -0.0030 -0.0010 -0.0008 -0.0008
SCP_Astral_MBR_Entrapment -0.0024 -0.0015 -0.0004 +0.0020 +0.0011
YEAST_KO_Astral_Entrapment -0.0041 -0.0029 -0.0029

Metric: ftr.precursors.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0131 0.0067 0.0067 0.5810 +0.5678 +0.5743 +0.5743

Metric: ftr.protein_groups.false_transfer_rate

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
EWZ_2P_MBR_Exploris 0.0476 0.4086 0.4086 1.8857 +1.8382 +1.4771 +1.4771

keap1.precursors

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 1 1 2 +1 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 1 1 3 +1 +0 +2
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 6 +0 +0 +6
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 9 13 13 14 +4 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 9 13 13 13 +4 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 10 13 13 13 +3 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

keap1.protein_groups

Dataset Gene Run v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
KEAP1KO_Eclipse KEAP1 KEAP1_KO_1 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_2 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_KO_3 0 0 0 1 +0 +0 +1
KEAP1KO_Eclipse KEAP1 KEAP1_WT_1 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_2 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse KEAP1 KEAP1_WT_3 1 1 1 1 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_KO_3 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_1 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_2 0 0 0 0 +0 +0 +0
KEAP1KO_Eclipse NFE2L2 KEAP1_WT_3 0 0 0 0 +0 +0 +0

Metric: cv.precursors.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.1459 0.1423 0.1423 0.1499 +0.0040 +0.0076 +0.0076
MTAC_3P_Standard 0.1393 0.1363 0.1363 0.1424 +0.0031 +0.0061 +0.0061
MTAC_Yeast_Alternating_3min 0.1456 0.1456 0.1464 +0.0008 +0.0008
MTAC_Yeast_Alternating_5min 0.1531 0.1402 0.1404 0.1427 -0.0103 +0.0025 +0.0024
MTAC_Yeast_Standard_3min 0.1698 0.1644 0.1641 0.1658 -0.0040 +0.0014 +0.0017
MTAC_Yeast_Standard_5min 0.1503 0.1369 0.1369 0.1381 -0.0122 +0.0013 +0.0013
Olsen_Astral_3P 0.0823 0.0884 0.0884
Olsen_Exploris_3P 0.1480 0.1500 0.1500 0.1517 +0.0037 +0.0018 +0.0018
SCIEX_3P 0.1284 0.1281 0.1281

Metric: cv.protein_groups.median_cv

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating 0.0763 0.0738 0.0738 0.0777 +0.0014 +0.0039 +0.0039
MTAC_3P_Standard 0.0723 0.0704 0.0704 0.0729 +0.0005 +0.0025 +0.0025
MTAC_Yeast_Alternating_3min 0.0670 0.0670 0.0681 +0.0011 +0.0011
MTAC_Yeast_Alternating_5min 0.0778 0.0596 0.0598 0.0611 -0.0167 +0.0015 +0.0013
MTAC_Yeast_Standard_3min 0.0792 0.0772 0.0772 0.0763 -0.0029 -0.0009 -0.0008
MTAC_Yeast_Standard_5min 0.0770 0.0567 0.0567 0.0587 -0.0183 +0.0020 +0.0020
Olsen_Astral_3P 0.0374 0.0373 0.0373
Olsen_Exploris_3P 0.1028 0.1020 0.1020 0.1049 +0.0020 +0.0029 +0.0029
SCIEX_3P 0.0864 0.0834 0.0834

fold_change.error.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0714 -0.0690 -0.0690 -0.0489 -0.0024 +0 -0.0201
MTAC_3P_Alternating human A vs B -0.0432 -0.0352 -0.0352 -0.0394 -0.0079 +0 +0.0042
MTAC_3P_Alternating yeast A vs B -0.0026 0.0043 0.0043 -0.0235 +0.0017 +0 +0.0192
MTAC_3P_Standard ecoli A vs B -0.1245 -0.1260 -0.1260 -0.0987 +0.0015 +0 -0.0274
MTAC_3P_Standard human A vs B -0.0785 -0.0730 -0.0730 -0.0733 -0.0055 +0 +0.0003
MTAC_3P_Standard yeast A vs B -0.0337 -0.0254 -0.0254 -0.0501 -0.0083 +0 +0.0247
Olsen_Astral_3P ecoli B vs A -0.0570 -0.0684 -0.0684 +0.0114 +0
Olsen_Astral_3P ecoli D vs C -0.2013 -0.2131 -0.2131 +0.0117 +0
Olsen_Astral_3P ecoli F vs E 0.0193 -0.0124 -0.0124 -0.0069 +0
Olsen_Astral_3P human B vs A -0.0036 -0.0104 -0.0104 +0.0067 +0
Olsen_Astral_3P human D vs C -0.3258 -0.3340 -0.3340 +0.0083 +0
Olsen_Astral_3P human F vs E 0.0777 0.0752 0.0752 -0.0025 +0
Olsen_Astral_3P yeast B vs A 0.0756 0.0863 0.0863 +0.0108 +0
Olsen_Astral_3P yeast D vs C -0.2263 -0.2274 -0.2274 +0.0011 +0
Olsen_Astral_3P yeast F vs E 0.1940 0.2202 0.2202 +0.0262 +0
Olsen_Exploris_3P ecoli B vs A 0.2272 0.2234 0.2234 0.2279 -0.0038 +0 +0.0045
Olsen_Exploris_3P ecoli D vs C -0.0687 -0.0755 -0.0755 -0.0760 +0.0068 +0 +0.0005
Olsen_Exploris_3P ecoli F vs E 0.2556 0.2741 0.2741 0.2565 +0.0186 +0 -0.0176
Olsen_Exploris_3P human B vs A 0.0955 0.1004 0.1004 0.0949 +0.0049 +0 -0.0055
Olsen_Exploris_3P human D vs C -0.0535 -0.0539 -0.0539 -0.0514 +0.0004 +0 -0.0025
Olsen_Exploris_3P human F vs E 0.1998 0.2053 0.2053 0.2060 +0.0054 +0 +0.0007
Olsen_Exploris_3P yeast B vs A 0.0478 0.0464 0.0464 0.0297 -0.0014 +0 -0.0167
Olsen_Exploris_3P yeast D vs C -0.1076 -0.1118 -0.1118 -0.1063 +0.0042 +0 -0.0055
Olsen_Exploris_3P yeast F vs E -0.0679 -0.0906 -0.0906 -0.0592 +0.0227 +0 -0.0314
SCIEX_3P ecoli B vs A -0.0531 -0.0718 -0.0718 +0.0187 +0
SCIEX_3P ecoli C vs A -0.0580 -0.0539 -0.0539 -0.0042 +0
SCIEX_3P ecoli C vs B -0.0146 0.0095 0.0095 -0.0050 +0
SCIEX_3P human B vs A -0.0334 -0.0452 -0.0452 +0.0117 +0
SCIEX_3P human C vs A -0.0804 -0.0564 -0.0564 -0.0241 +0
SCIEX_3P human C vs B -0.0484 -0.0152 -0.0152 -0.0332 +0
SCIEX_3P yeast B vs A -0.0084 -0.0194 -0.0194 +0.0110 +0
SCIEX_3P yeast C vs A -0.1064 -0.0712 -0.0712 -0.0352 +0
SCIEX_3P yeast C vs B -0.0912 -0.0433 -0.0433 -0.0479 +0

fold_change.error.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B -0.0653 -0.0665 -0.0665 -0.0436 +0.0011 +0 -0.0229
MTAC_3P_Alternating human A vs B -0.0451 -0.0368 -0.0368 -0.0399 -0.0083 +0 +0.0031
MTAC_3P_Alternating yeast A vs B 0.0016 0.0064 0.0064 -0.0243 +0.0048 +0 +0.0179
MTAC_3P_Standard ecoli A vs B -0.1244 -0.1245 -0.1245 -0.0887 +0.0000 +0 -0.0357
MTAC_3P_Standard human A vs B -0.0772 -0.0708 -0.0708 -0.0743 -0.0064 +0 +0.0035
MTAC_3P_Standard yeast A vs B -0.0322 -0.0248 -0.0248 -0.0535 -0.0075 +0 +0.0287
Olsen_Astral_3P ecoli B vs A -0.0453 -0.0651 -0.0651 +0.0198 +0
Olsen_Astral_3P ecoli D vs C -0.1614 -0.1660 -0.1660 +0.0046 +0
Olsen_Astral_3P ecoli F vs E 0.0601 0.0256 0.0256 -0.0344 +0
Olsen_Astral_3P human B vs A -0.0149 -0.0219 -0.0219 +0.0070 +0
Olsen_Astral_3P human D vs C -0.2928 -0.3003 -0.3003 +0.0075 +0
Olsen_Astral_3P human F vs E 0.0700 0.0700 0.0700 -0.0001 +0
Olsen_Astral_3P yeast B vs A 0.0543 0.0660 0.0660 +0.0118 +0
Olsen_Astral_3P yeast D vs C -0.1994 -0.1997 -0.1997 +0.0003 +0
Olsen_Astral_3P yeast F vs E 0.1690 0.1963 0.1963 +0.0273 +0
Olsen_Exploris_3P ecoli B vs A 0.2172 0.2133 0.2133 0.2328 -0.0039 +0 +0.0195
Olsen_Exploris_3P ecoli D vs C -0.0663 -0.0743 -0.0743 -0.0630 +0.0080 +0 -0.0113
Olsen_Exploris_3P ecoli F vs E 0.2558 0.3042 0.3042 0.2831 +0.0484 +0 -0.0211
Olsen_Exploris_3P human B vs A 0.0841 0.0878 0.0878 0.0857 +0.0037 +0 -0.0021
Olsen_Exploris_3P human D vs C -0.0502 -0.0508 -0.0508 -0.0475 +0.0006 +0 -0.0033
Olsen_Exploris_3P human F vs E 0.1988 0.2026 0.2026 0.2051 +0.0038 +0 +0.0025
Olsen_Exploris_3P yeast B vs A 0.0433 0.0386 0.0386 0.0103 -0.0047 +0 -0.0283
Olsen_Exploris_3P yeast D vs C -0.1095 -0.1163 -0.1163 -0.1141 +0.0068 +0 -0.0022
Olsen_Exploris_3P yeast F vs E -0.0534 -0.1043 -0.1043 -0.1191 +0.0509 +0 +0.0148
SCIEX_3P ecoli B vs A -0.0415 -0.0613 -0.0613 +0.0198 +0
SCIEX_3P ecoli C vs A -0.0531 -0.0459 -0.0459 -0.0072 +0
SCIEX_3P ecoli C vs B -0.0149 0.0153 0.0153 +0.0003 +0
SCIEX_3P human B vs A -0.0318 -0.0450 -0.0450 +0.0132 +0
SCIEX_3P human C vs A -0.0819 -0.0580 -0.0580 -0.0239 +0
SCIEX_3P human C vs B -0.0489 -0.0140 -0.0140 -0.0349 +0
SCIEX_3P yeast B vs A -0.0091 -0.0233 -0.0233 +0.0141 +0
SCIEX_3P yeast C vs A -0.1151 -0.0731 -0.0731 -0.0420 +0
SCIEX_3P yeast C vs B -0.1020 -0.0500 -0.0500 -0.0520 +0

fold_change.variance.precursors

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.2619 0.2986 0.2986 0.2992 +0.0367 +0 +0.0006
MTAC_3P_Alternating human A vs B 0.1984 0.2126 0.2126 0.1892 +0.0142 +0 -0.0234
MTAC_3P_Alternating yeast A vs B 0.2558 0.2707 0.2707 0.2549 +0.0148 +0 -0.0158
MTAC_3P_Standard ecoli A vs B 0.2681 0.3085 0.3085 0.2885 +0.0404 +0 -0.0200
MTAC_3P_Standard human A vs B 0.2062 0.2230 0.2230 0.1934 +0.0168 +0 -0.0297
MTAC_3P_Standard yeast A vs B 0.2555 0.2741 0.2741 0.2408 +0.0186 +0 -0.0333
Olsen_Astral_3P ecoli B vs A 0.5438 0.5988 0.5988 +0.0550 +0
Olsen_Astral_3P ecoli D vs C 0.3566 0.3951 0.3951 +0.0384 +0
Olsen_Astral_3P ecoli F vs E 1.1682 1.3605 1.3605 +0.1923 +0
Olsen_Astral_3P human B vs A 0.2100 0.2539 0.2539 +0.0439 +0
Olsen_Astral_3P human D vs C 0.2930 0.3416 0.3416 +0.0486 +0
Olsen_Astral_3P human F vs E 0.3046 0.3584 0.3584 +0.0538 +0
Olsen_Astral_3P yeast B vs A 0.2937 0.3308 0.3308 +0.0371 +0
Olsen_Astral_3P yeast D vs C 0.2553 0.2849 0.2849 +0.0296 +0
Olsen_Astral_3P yeast F vs E 0.4774 0.5563 0.5563 +0.0788 +0
Olsen_Exploris_3P ecoli B vs A 0.5783 0.6122 0.6122 0.7214 +0.0339 +0 +0.1091
Olsen_Exploris_3P ecoli D vs C 0.1629 0.1567 0.1567 0.1638 -0.0061 +0 +0.0070
Olsen_Exploris_3P ecoli F vs E 0.8044 0.8085 0.8085 1.2903 +0.0041 +0 +0.4818
Olsen_Exploris_3P human B vs A 0.3372 0.3388 0.3388 0.3441 +0.0015 +0 +0.0054
Olsen_Exploris_3P human D vs C 0.1096 0.1750 0.1750 0.1733 +0.0655 +0 -0.0017
Olsen_Exploris_3P human F vs E 0.3024 0.3305 0.3305 0.3421 +0.0280 +0 +0.0117
Olsen_Exploris_3P yeast B vs A 0.6189 0.5961 0.5961 0.7155 -0.0228 +0 +0.1194
Olsen_Exploris_3P yeast D vs C 0.1498 0.2462 0.2462 0.2740 +0.0964 +0 +0.0279
Olsen_Exploris_3P yeast F vs E 1.0859 1.1525 1.1525 1.4277 +0.0666 +0 +0.2752
SCIEX_3P ecoli B vs A 0.5007 0.5347 0.5347 +0.0340 +0
SCIEX_3P ecoli C vs A 0.5855 0.5991 0.5991 +0.0136 +0
SCIEX_3P ecoli C vs B 0.1466 0.1463 0.1463 -0.0003 +0
SCIEX_3P human B vs A 0.1942 0.2132 0.2132 +0.0190 +0
SCIEX_3P human C vs A 0.2171 0.2455 0.2455 +0.0284 +0
SCIEX_3P human C vs B 0.1705 0.1985 0.1985 +0.0280 +0
SCIEX_3P yeast B vs A 0.2341 0.2465 0.2465 +0.0124 +0
SCIEX_3P yeast C vs A 0.5719 0.6150 0.6150 +0.0431 +0
SCIEX_3P yeast C vs B 0.4881 0.5513 0.5513 +0.0632 +0

fold_change.variance.protein_groups

Dataset Species Condition v0.6.4 v0.6.6 develop current Δ v0.6.6 vs v0.6.4 Δ develop vs v0.6.6 Δ current vs develop
MTAC_3P_Alternating ecoli A vs B 0.1295 0.1525 0.1525 0.1309 +0.0230 +0 -0.0216
MTAC_3P_Alternating human A vs B 0.0731 0.0757 0.0757 0.0738 +0.0026 +0 -0.0018
MTAC_3P_Alternating yeast A vs B 0.1300 0.1123 0.1123 0.1225 -0.0177 +0 +0.0102
MTAC_3P_Standard ecoli A vs B 0.1320 0.1244 0.1244 0.1338 -0.0076 +0 +0.0094
MTAC_3P_Standard human A vs B 0.0679 0.0706 0.0706 0.0703 +0.0026 +0 -0.0002
MTAC_3P_Standard yeast A vs B 0.1262 0.1294 0.1294 0.1229 +0.0033 +0 -0.0065
Olsen_Astral_3P ecoli B vs A 0.1924 0.2322 0.2322 +0.0399 +0
Olsen_Astral_3P ecoli D vs C 0.1089 0.1342 0.1342 +0.0252 +0
Olsen_Astral_3P ecoli F vs E 0.3405 0.4293 0.4293 +0.0889 +0
Olsen_Astral_3P human B vs A 0.0420 0.0445 0.0445 +0.0025 +0
Olsen_Astral_3P human D vs C 0.0549 0.0649 0.0649 +0.0100 +0
Olsen_Astral_3P human F vs E 0.0528 0.0597 0.0597 +0.0069 +0
Olsen_Astral_3P yeast B vs A 0.0563 0.0533 0.0533 -0.0030 +0
Olsen_Astral_3P yeast D vs C 0.0483 0.0505 0.0505 +0.0023 +0
Olsen_Astral_3P yeast F vs E 0.0959 0.1287 0.1287 +0.0328 +0
Olsen_Exploris_3P ecoli B vs A 0.2033 0.2490 0.2490 0.2756 +0.0457 +0 +0.0266
Olsen_Exploris_3P ecoli D vs C 0.0636 0.0575 0.0575 0.0651 -0.0061 +0 +0.0076
Olsen_Exploris_3P ecoli F vs E 0.4584 0.4220 0.4220 0.5897 -0.0364 +0 +0.1677
Olsen_Exploris_3P human B vs A 0.0646 0.0587 0.0587 0.0672 -0.0059 +0 +0.0085
Olsen_Exploris_3P human D vs C 0.0301 0.0346 0.0346 0.0371 +0.0045 +0 +0.0025
Olsen_Exploris_3P human F vs E 0.0759 0.0741 0.0741 0.0933 -0.0018 +0 +0.0192
Olsen_Exploris_3P yeast B vs A 0.2336 0.2060 0.2060 0.3298 -0.0276 +0 +0.1238
Olsen_Exploris_3P yeast D vs C 0.0715 0.0758 0.0758 0.0755 +0.0043 +0 -0.0003
Olsen_Exploris_3P yeast F vs E 0.5309 0.4212 0.4212 0.5297 -0.1098 +0 +0.1085
SCIEX_3P ecoli B vs A 0.2191 0.3229 0.3229 +0.1039 +0
SCIEX_3P ecoli C vs A 0.2647 0.3082 0.3082 +0.0434 +0
SCIEX_3P ecoli C vs B 0.0574 0.0650 0.0650 +0.0076 +0
SCIEX_3P human B vs A 0.0657 0.0604 0.0604 -0.0052 +0
SCIEX_3P human C vs A 0.0731 0.0655 0.0655 -0.0076 +0
SCIEX_3P human C vs B 0.0556 0.0615 0.0615 +0.0059 +0
SCIEX_3P yeast B vs A 0.1098 0.0968 0.0968 -0.0129 +0
SCIEX_3P yeast C vs A 0.2938 0.3167 0.3167 +0.0229 +0
SCIEX_3P yeast C vs B 0.2531 0.2947 0.2947 +0.0416 +0

Metric: runtime

Dataset v0.6.4 v0.6.6 develop current Δ current vs v0.6.4 Δ current vs v0.6.6 Δ current vs develop % current vs v0.6.4 % current vs v0.6.6 % current vs develop
APMS_Astral 247.2300 244.2700 247.1600
KEAP1KO_Eclipse 24.0700 22.8000 19.6500 14.8500 -9.2200 -7.9500 -4.8000 -38.3049% -34.8684% -24.4275%
MTAC_3P_Alternating 12.7500 13.6800 8.5700 6.8800 -5.8700 -6.8000 -1.6900 -46.0392% -49.7076% -19.7200%
MTAC_3P_Standard 12.3100 13.0600 10.2700 6.9700 -5.3400 -6.0900 -3.3000 -43.3794% -46.6309% -32.1324%
MTAC_Yeast_Alternating_3min 5.4900 4.0600 3.9000 -1.5900 -0.1600 -28.9617% -3.9409%
MTAC_Yeast_Alternating_5min 5.3800 4.7200 4.1500 4.0100 -1.3700 -0.7100 -0.1400 -25.4647% -15.0424% -3.3735%
MTAC_Yeast_Standard_3min 5.4300 5.6500 4.0200 3.9100 -1.5200 -1.7400 -0.1100 -27.9926% -30.7965% -2.7363%
MTAC_Yeast_Standard_5min 5.5500 4.3000 4.2900 4.0500 -1.5000 -0.2500 -0.2400 -27.0270% -5.8140% -5.5944%
Olsen_Astral_3P 76.4000 66.2000 62.2200
Olsen_Exploris_3P 27.6600 23.7200 20.3200 13.5200 -14.1400 -10.2000 -6.8000 -51.1208% -43.0017% -33.4646%
SCIEX_3P 30.2900 33.2900 28.0700
SCP_Astral_1000pg_12ms 5.7900 5.9000
SCP_Astral_1000pg_24ms 6.2600 5.2000 4.4400 4.1500 -2.1100 -1.0500 -0.2900 -33.7061% -20.1923% -6.5315%
SCP_Astral_1000pg_3ms 4.5200 6.1100 3.7600 3.8600 -0.6600 -2.2500 +0.1000 -14.6018% -36.8249% +2.6596%
SCP_Astral_1000pg_6ms 5.7400 3.5300 3.5300 3.5900 -2.1500 +0.0600 +0.0600 -37.4564% +1.6997% +1.6997%
SCP_Astral_10ng_12ms 7.0700 5.6300 5.4400 5.2100 -1.8600 -0.4200 -0.2300 -26.3083% -7.4600% -4.2279%
SCP_Astral_10ng_24ms 7.5900 8.3600 5.9200 5.4100 -2.1800 -2.9500 -0.5100 -28.7220% -35.2871% -8.6149%
SCP_Astral_10ng_6ms 7.3800 4.8900 4.7900 4.7500 -2.6300 -0.1400 -0.0400 -35.6369% -2.8630% -0.8351%
SCP_Astral_10ng_ms 6.4500 5.1900 4.6600 4.6700 -1.7800 -0.5200 +0.0100 -27.5969% -10.0193% +0.2146%
SCP_Astral_250pg_12ms 4.7400 3.5100 3.4700 3.4100 -1.3300 -0.1000 -0.0600 -28.0591% -2.8490% -1.7291%
SCP_Astral_250pg_24ms 5.2600 4.1900 3.6100
SCP_Astral_250pg_3ms 4.6500 3.8300 3.4600 3.4600 -1.1900 -0.3700 +0 -25.5914% -9.6606% +0%
SCP_Astral_250pg_6ms 4.1700 3.3900 3.2700 3.3600 -0.8100 -0.0300 +0.0900 -19.4245% -0.8850% +2.7523%
SCP_Astral_500pg_12ms 5.2800 3.4900 3.5400 3.4200 -1.8600 -0.0700 -0.1200 -35.2273% -2.0057% -3.3898%
SCP_Astral_500pg_24ms 5.5100 3.8200 3.6600 -1.8500 -0.1600 -33.5753% -4.1885%
SCP_Astral_500pg_3ms 4.7300 3.5000 -1.2300 -26.0042%
SCP_Astral_500pg_6ms 4.6500 3.4300 3.5100 3.5300 -1.1200 +0.1000 +0.0200 -24.0860% +2.9155% +0.5698%
SCP_Astral_MBR 9.0400 5.7600 -3.2800 -36.2832%
Seer_Astral_45 100.3500 67.8100 66.2700
Seer_Astral_single 4.3100 5.7400 4.0600 -0.2500 -1.6800 -5.8005% -29.2683%
YEAST_KO_Astral 235.6300 216.9300 213.3300
EWZ_2P_MBR_Exploris 29 29.1900 24.7500 19.7700 -9.2300 -9.4200 -4.9800 -31.8276% -32.2713% -20.1212%
EWZ_2P_noMBR_Exploris 27.1100 28.3100 22.0700 19.7600 -7.3500 -8.5500 -2.3100 -27.1118% -30.2013% -10.4667%

EWZ_2P_MBR_Exploris_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Alternating_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_3P_Standard_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Alternating_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_3min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

MTAC_Yeast_Standard_5min_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

Olsen_Exploris_3P_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_1000pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_3ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_10ng_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_250pg_6ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_12ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_24ms_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_3ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_500pg_6ms_Entrapment

efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png

SCP_Astral_MBR_Entrapment

efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_global_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_MBR_boosted_prec_prob.png
efdr_comparison_global_pg_score.png
efdr_comparison_global_pg_score.png
efdr_comparison_pg_score.png
efdr_comparison_pg_score.png